BLASTX nr result

ID: Coptis24_contig00001848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001848
         (4390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15315.3| unnamed protein product [Vitis vinifera]              299   5e-78
ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3B...   298   9e-78
ref|XP_003552573.1| PREDICTED: LOW QUALITY PROTEIN: putative G3B...   291   1e-75
gb|ACU19575.1| unknown [Glycine max]                                  291   1e-75
ref|XP_003531859.1| PREDICTED: putative G3BP-like protein-like [...   290   3e-75

>emb|CBI15315.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  299 bits (765), Expect = 5e-78
 Identities = 186/411 (45%), Positives = 236/411 (57%), Gaps = 6/411 (1%)
 Frame = -3

Query: 3728 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 3549
            MA Q + P   H A  VGNAFV+QYY ILH +P+L+Y+FYQDSSVLSRP   G M +V T
Sbjct: 34   MAMQEATPAPLHSAAFVGNAFVDQYYPILHQNPELLYKFYQDSSVLSRPDSSGSMTTVTT 93

Query: 3548 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 3369
            +  IN  I+S  Y E K EI+T DAQDSYK GV V VTG + +KDNVKRKF QSFFLAPQ
Sbjct: 94   LQAINDKIMSFHYGEYKMEIETADAQDSYKEGVTVLVTGSVTLKDNVKRKFGQSFFLAPQ 153

Query: 3368 DKGYFVLNDIFRYVDEYETVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTT 3189
            D GYFVLNDIF Y++E ++++ +     V+G                +H+P+H + +  T
Sbjct: 154  DNGYFVLNDIFTYIEEKKSLQEN--FAPVDGINETAPTAALTPDPEANHVPDHLVVDPAT 211

Query: 3188 P--EVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVH-SGQDEVLPVTEPASTVPEDTPK 3018
            P  E E    N   V +PSDN                 S ++E+  V + A    ED PK
Sbjct: 212  PSFEEEEDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAAQEDAPK 271

Query: 3017 KSYASIVKVMK---ETTPVHVPTNIRXXXXXXXXXXXXXXXGIAEQGTXXXXXXXXXXXX 2847
            KSYASIVKVMK    +TPV   + +R                I +Q              
Sbjct: 272  KSYASIVKVMKGSATSTPVFATSTVR-----------AAPANIDQQLAGSAKSAPAPEAW 320

Query: 2846 XXXXXXXXXNLPEEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRSTNKQXXX 2667
                     +     EG+SIYV+ LPL+A+V ++EEEFK FG I+ +GIQVRS NKQ   
Sbjct: 321  TPTSDSAPESSNINEEGFSIYVRHLPLSATVPQLEEEFKKFGPIKQDGIQVRS-NKQ--G 377

Query: 2666 XXXXXXXXESLESVKSALKASPITFGDRQVYIEEKRTSTRVGATGKPRYPP 2514
                    ESL S++SAL+ASPIT GDRQ  +EEKRT+TRVGA+G+ RYPP
Sbjct: 378  FCFGFVEFESLSSMQSALEASPITIGDRQAVVEEKRTTTRVGASGRGRYPP 428


>ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
            [Vitis vinifera]
          Length = 469

 Score =  298 bits (763), Expect = 9e-78
 Identities = 186/411 (45%), Positives = 235/411 (57%), Gaps = 6/411 (1%)
 Frame = -3

Query: 3728 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 3549
            MA Q + P   H A  VGNAFV+QYY ILH +P+L+Y+FYQDSSVLSRP   G M +V T
Sbjct: 1    MAMQEATPAPLHSAAFVGNAFVDQYYPILHQNPELLYKFYQDSSVLSRPDSSGSMTTVTT 60

Query: 3548 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 3369
            +  IN  I+S  Y E K EI+T DAQDSYK GV V VTG + +KDNVKRKF QSFFLAPQ
Sbjct: 61   LQAINDKIMSFHYGEYKMEIETADAQDSYKEGVTVLVTGSVTLKDNVKRKFGQSFFLAPQ 120

Query: 3368 DKGYFVLNDIFRYVDEYETVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTT 3189
            D GYFVLNDIF Y++E ++++ +   V                    +H+P+H + +  T
Sbjct: 121  DNGYFVLNDIFTYIEEKKSLQENFAPVDGINETAPTAALTPDPGLXANHVPDHLVVDPAT 180

Query: 3188 P--EVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVH-SGQDEVLPVTEPASTVPEDTPK 3018
            P  E E    N   V +PSDN                 S ++E+  V + A    ED PK
Sbjct: 181  PSFEEEEDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAAQEDAPK 240

Query: 3017 KSYASIVKVMK---ETTPVHVPTNIRXXXXXXXXXXXXXXXGIAEQGTXXXXXXXXXXXX 2847
            KSYASIVKVMK    +TPV   + +R                I +Q              
Sbjct: 241  KSYASIVKVMKGSATSTPVFATSTVR-----------AAPANIDQQLAGSAKSAPAPEAW 289

Query: 2846 XXXXXXXXXNLPEEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRSTNKQXXX 2667
                     +     EG+SIYV+ LPL+A+V ++EEEFK FG I+ +GIQVRS NKQ   
Sbjct: 290  TPTSDSAPESSNINEEGFSIYVRHLPLSATVPQLEEEFKKFGPIKQDGIQVRS-NKQ--G 346

Query: 2666 XXXXXXXXESLESVKSALKASPITFGDRQVYIEEKRTSTRVGATGKPRYPP 2514
                    ESL S++SAL+ASPIT GDRQ  +EEKRT+TRVGA+G+ RYPP
Sbjct: 347  FCFGFVEFESLSSMQSALEASPITIGDRQAVVEEKRTTTRVGASGRGRYPP 397


>ref|XP_003552573.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
            [Glycine max]
          Length = 461

 Score =  291 bits (744), Expect = 1e-75
 Identities = 190/421 (45%), Positives = 231/421 (54%), Gaps = 16/421 (3%)
 Frame = -3

Query: 3728 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 3549
            MA Q + P     AQ+VGNAFVEQYYHILH SPDLVYRFYQDSSV+SRP   G M SV T
Sbjct: 1    MALQTATPPTTPSAQVVGNAFVEQYYHILHHSPDLVYRFYQDSSVISRPDSSGVMTSVTT 60

Query: 3548 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 3369
            M  IN  ILS+++KE KAEIKT DAQ SYK GV V VTG L  KDN++RKF QSFFLAPQ
Sbjct: 61   MKGINEKILSLNFKEFKAEIKTADAQKSYKEGVTVLVTGCLTGKDNLRRKFAQSFFLAPQ 120

Query: 3368 DKGYFVLNDIFRYVDEYE-------TVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEH 3210
            D GYFVLND+FRYV+++E       T + DA AV V                  SH  + 
Sbjct: 121  DNGYFVLNDVFRYVEDHEPSELPPVTGDGDAAAVTVT------------PEPEPSHFADS 168

Query: 3209 PMPENTTPEVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVH--SGQDEVLPVTEPASTV 3036
              P+ T   V       E  +EPS++               H  S  ++    TE AS+ 
Sbjct: 169  SAPDPTNSHVNKGQTVAENAYEPSNHHERQIPVENVDNVEPHFQSNGNDDSQATELASSA 228

Query: 3035 PEDTPKKSYASIVKVMKE---TTPVHVPTNIRXXXXXXXXXXXXXXXGIAEQGTXXXXXX 2865
             E   KKSYASIVKV KE    T V+VPTN                    E         
Sbjct: 229  QE---KKSYASIVKVQKEGSVATKVYVPTNTLKSGPNKTENKVVESVESTEVSEAALDSV 285

Query: 2864 XXXXXXXXXXXXXXXNLPEEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRST 2685
                              EEVEG+SIY+++LPLN + +++E EFK FG I+P GIQVR+ 
Sbjct: 286  TXPXNSDAH---------EEVEGHSIYIRNLPLNVTAAQLELEFKKFGPIKPGGIQVRNN 336

Query: 2684 NKQXXXXXXXXXXXESLESVKSALKASPITFGDRQVYIEEKRTSTRVG----ATGKPRYP 2517
             +Q            SL S+ SA++ASP+  G RQ  +E KRT+TRVG    +TG+PR P
Sbjct: 337  KQQ--GYCFGFVEFLSLNSMNSAIQASPVPIGGRQAVVEIKRTTTRVGSGINSTGRPRIP 394

Query: 2516 P 2514
            P
Sbjct: 395  P 395


>gb|ACU19575.1| unknown [Glycine max]
          Length = 461

 Score =  291 bits (744), Expect = 1e-75
 Identities = 188/421 (44%), Positives = 229/421 (54%), Gaps = 16/421 (3%)
 Frame = -3

Query: 3728 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 3549
            MA Q + P     AQ+VGNAFVEQYYHILH SPDLVYRFYQDSSV+SRP   G M SV T
Sbjct: 1    MALQTATPPTTPSAQVVGNAFVEQYYHILHHSPDLVYRFYQDSSVISRPDSSGVMTSVTT 60

Query: 3548 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 3369
            M  IN  ILS+++KE KAEIKT DAQ SYK GV V VTG L  KDN++RKF QSFFLAPQ
Sbjct: 61   MKGINEKILSLNFKEFKAEIKTADAQKSYKEGVTVLVTGCLTGKDNLRRKFAQSFFLAPQ 120

Query: 3368 DKGYFVLNDIFRYVDEYE-------TVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEH 3210
            D GYFVLND+FRYV+++E       T + DA AV V                  SH  + 
Sbjct: 121  DNGYFVLNDVFRYVEDHEPSELPPVTGDGDAAAVTVT------------PEPEPSHFADS 168

Query: 3209 PMPENTTPEVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVH--SGQDEVLPVTEPASTV 3036
              P+ T   V       E  +EPS++               H  S  ++    TE AS+ 
Sbjct: 169  SAPDPTNSHVNKGQTVAENAYEPSNHHERQIPVENVDNVEPHFQSNGNDDSQATELASSA 228

Query: 3035 PEDTPKKSYASIVKVMKE---TTPVHVPTNIRXXXXXXXXXXXXXXXGIAEQGTXXXXXX 2865
             E   KKSYASIVKV KE    T V+VPTN                    E         
Sbjct: 229  QE---KKSYASIVKVQKEGSVATKVYVPTNTLKSGPNKTENKVVESVESTEVSEAALDSV 285

Query: 2864 XXXXXXXXXXXXXXXNLPEEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRST 2685
                              EEVEG+SIY+++LPLN + +++E EFK FG I+P GIQVR+ 
Sbjct: 286  NNPESSDAH---------EEVEGHSIYIRNLPLNVTAAQLELEFKKFGPIKPGGIQVRNN 336

Query: 2684 NKQXXXXXXXXXXXESLESVKSALKASPITFGDRQVYIEEKRTSTRVG----ATGKPRYP 2517
             +Q            SL S+ SA++ASP+  G RQ  +E KRT+TRVG    +TG+PR P
Sbjct: 337  KQQ--GYCFGFVEFLSLNSMNSAIQASPVPIGGRQAVVEIKRTTTRVGSGINSTGRPRIP 394

Query: 2516 P 2514
            P
Sbjct: 395  P 395


>ref|XP_003531859.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 462

 Score =  290 bits (741), Expect = 3e-75
 Identities = 186/420 (44%), Positives = 230/420 (54%), Gaps = 16/420 (3%)
 Frame = -3

Query: 3728 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 3549
            MA Q + P     AQ+VGNAFVEQYYHILH SP  VYRFYQDSSV+SRP   G M SV T
Sbjct: 1    MALQTATPPTTPSAQVVGNAFVEQYYHILHHSPGSVYRFYQDSSVISRPDSSGVMTSVTT 60

Query: 3548 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 3369
            M  IN  ILS+++KE KAEIKT DAQ SYK GV V VTG L  KDN++RKF QSFFLAPQ
Sbjct: 61   MKGINEKILSLNFKEFKAEIKTADAQKSYKEGVTVLVTGCLTGKDNLRRKFAQSFFLAPQ 120

Query: 3368 DKGYFVLNDIFRYVDEYE-------TVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEH 3210
            D GYFVLND+FRYV+++E       T + D+ AV V                  SH+ + 
Sbjct: 121  DNGYFVLNDVFRYVEDHEPSELPPVTGDGDSAAVTVT------------PELEPSHVADS 168

Query: 3209 PMPENTTPEVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVH--SGQDEVLPVTEPASTV 3036
              PE T   V       E  +E S+N               H  S  ++    TE AS+ 
Sbjct: 169  CAPEPTNSHVNKGQTVAENAYELSNNHERQIPVENEGNVESHFQSNGNDDSQATELASSA 228

Query: 3035 PEDTPKKSYASIVKVMKET---TPVHVPTNIRXXXXXXXXXXXXXXXGIAEQGTXXXXXX 2865
             +D PKKSYASIVKV K +   T V+VPTN                    E         
Sbjct: 229  QDDAPKKSYASIVKVQKGSSVPTKVYVPTNTLKSGPNKTESKVVESVESTE--------- 279

Query: 2864 XXXXXXXXXXXXXXXNLPEEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRST 2685
                           +  EEVEG+SIY+++LPLN +V+++E EFK FG I+P GIQVR+ 
Sbjct: 280  VPEAALESVSNPESSDAHEEVEGHSIYIRNLPLNVTVAQLELEFKKFGPIKPGGIQVRNN 339

Query: 2684 NKQXXXXXXXXXXXESLESVKSALKASPITFGDRQVYIEEKRTSTRVGA----TGKPRYP 2517
             +Q            SL S+ SA++ASP+  G RQ  +E KRT+TRVG+    TG+PR P
Sbjct: 340  KQQ--GYCFGFVEFLSLNSMNSAIQASPVPIGGRQAVVEIKRTTTRVGSGINGTGRPRIP 397


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