BLASTX nr result

ID: Coptis24_contig00001768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001768
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22196.3| unnamed protein product [Vitis vinifera]              349   8e-94
ref|XP_002283325.1| PREDICTED: protein SET [Vitis vinifera]           349   8e-94
ref|XP_002275632.1| PREDICTED: protein SET [Vitis vinifera] gi|2...   345   1e-92
ref|XP_002323845.1| nucleosome/chromatin assembly factor group [...   332   2e-88
gb|ABK21038.1| unknown [Picea sitchensis]                             330   4e-88

>emb|CBI22196.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  349 bits (896), Expect = 8e-94
 Identities = 167/213 (78%), Positives = 190/213 (89%)
 Frame = -2

Query: 1107 VSERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKR 928
            VS+R  E+D++HIDGELVLSIEKLQE+QDELEKVNEEASDKVLEVEQKY++IRRPVYVKR
Sbjct: 11   VSDRIVEDDADHIDGELVLSIEKLQELQDELEKVNEEASDKVLEVEQKYNEIRRPVYVKR 70

Query: 927  TEIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSN 748
             EIIK IPDFWLTAF+SHPAL D+LSEEDQKIFKY+ SL+VEDFKDVKSGYSI F+FN N
Sbjct: 71   NEIIKSIPDFWLTAFLSHPALCDLLSEEDQKIFKYLDSLEVEDFKDVKSGYSIAFNFNQN 130

Query: 747  PYFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKGNKRPLAVESFFTWFS 568
            PYFE+TKLTKTF+F DEG ++I GT IKWKEGMG +NG NH+KK NKRP A ESFF WFS
Sbjct: 131  PYFEDTKLTKTFTFFDEGTTKITGTAIKWKEGMGASNGVNHDKK-NKRPFAEESFFAWFS 189

Query: 567  ETQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 469
            ETQ  D+ +G  DEVAE+IK+DLWPNPL+YFNN
Sbjct: 190  ETQQKDIMEGLQDEVAEIIKEDLWPNPLKYFNN 222


>ref|XP_002283325.1| PREDICTED: protein SET [Vitis vinifera]
          Length = 255

 Score =  349 bits (896), Expect = 8e-94
 Identities = 167/213 (78%), Positives = 190/213 (89%)
 Frame = -2

Query: 1107 VSERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKR 928
            VS+R  E+D++HIDGELVLSIEKLQE+QDELEKVNEEASDKVLEVEQKY++IRRPVYVKR
Sbjct: 11   VSDRIVEDDADHIDGELVLSIEKLQELQDELEKVNEEASDKVLEVEQKYNEIRRPVYVKR 70

Query: 927  TEIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSN 748
             EIIK IPDFWLTAF+SHPAL D+LSEEDQKIFKY+ SL+VEDFKDVKSGYSI F+FN N
Sbjct: 71   NEIIKSIPDFWLTAFLSHPALCDLLSEEDQKIFKYLDSLEVEDFKDVKSGYSIAFNFNQN 130

Query: 747  PYFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKGNKRPLAVESFFTWFS 568
            PYFE+TKLTKTF+F DEG ++I GT IKWKEGMG +NG NH+KK NKRP A ESFF WFS
Sbjct: 131  PYFEDTKLTKTFTFFDEGTTKITGTAIKWKEGMGASNGVNHDKK-NKRPFAEESFFAWFS 189

Query: 567  ETQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 469
            ETQ  D+ +G  DEVAE+IK+DLWPNPL+YFNN
Sbjct: 190  ETQQKDIMEGLQDEVAEIIKEDLWPNPLKYFNN 222


>ref|XP_002275632.1| PREDICTED: protein SET [Vitis vinifera] gi|297733991|emb|CBI15238.3|
            unnamed protein product [Vitis vinifera]
          Length = 268

 Score =  345 bits (885), Expect = 1e-92
 Identities = 159/212 (75%), Positives = 191/212 (90%)
 Frame = -2

Query: 1104 SERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKRT 925
            SE+ EE +S+HIDG+LVLSIEKLQE+QD+LEK+NEEASDKVLEVEQKY++IR+P+Y KR 
Sbjct: 12   SEKEEEVNSDHIDGDLVLSIEKLQEIQDDLEKINEEASDKVLEVEQKYNEIRKPIYDKRN 71

Query: 924  EIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSNP 745
            +IIK IPDFWLTAF+SHPAL D+LSEEDQKIFKY+SSL+VEDFKDVKSGYSITF+FN NP
Sbjct: 72   DIIKSIPDFWLTAFLSHPALGDLLSEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNPNP 131

Query: 744  YFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKGNKRPLAVESFFTWFSE 565
            +FE+TKL KTF+F DEG+++I  T+IKWK+GMGI NG NHEKKGNKRP+A  SFF+WFSE
Sbjct: 132  FFEDTKLKKTFTFLDEGITKISVTSIKWKDGMGIPNGVNHEKKGNKRPIADASFFSWFSE 191

Query: 564  TQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 469
            TQ  D+ D  HDE+AE+IK+DLWPNPL YFN+
Sbjct: 192  TQQKDIMDDIHDEIAEIIKEDLWPNPLTYFNS 223


>ref|XP_002323845.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
            gi|222866847|gb|EEF03978.1| nucleosome/chromatin assembly
            factor group [Populus trichocarpa]
          Length = 219

 Score =  332 bits (850), Expect = 2e-88
 Identities = 153/208 (73%), Positives = 187/208 (89%)
 Frame = -2

Query: 1092 EEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKRTEIIK 913
            EEE+++HIDGELV+SIEKLQE+QDELEK+NE+ASD+VLE+EQKY+++RRPVY KR +IIK
Sbjct: 13   EEEETDHIDGELVISIEKLQELQDELEKINEQASDEVLEIEQKYNEVRRPVYTKRNDIIK 72

Query: 912  GIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSNPYFEN 733
             IPDFWLTAF+SHPAL D+L+E+DQKIFKY+ SL VED KDVKSGYSITF+F  NP+FE+
Sbjct: 73   CIPDFWLTAFLSHPALCDLLTEDDQKIFKYLDSLHVEDSKDVKSGYSITFNFKENPHFED 132

Query: 732  TKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKGNKRPLAVESFFTWFSETQHS 553
            TKL KTF+FSDEG ++I GT IKWKEGMG ANG NHEKKGNKRPLA  SFF+WF+ET+  
Sbjct: 133  TKLIKTFTFSDEGTTKITGTDIKWKEGMGTANGGNHEKKGNKRPLAELSFFSWFAETEQK 192

Query: 552  DLSDGFHDEVAEVIKDDLWPNPLQYFNN 469
            ++++  HDEVAE+IK+DLWPNPL+YFNN
Sbjct: 193  EITE-LHDEVAEIIKEDLWPNPLKYFNN 219


>gb|ABK21038.1| unknown [Picea sitchensis]
          Length = 257

 Score =  330 bits (847), Expect = 4e-88
 Identities = 157/212 (74%), Positives = 183/212 (86%)
 Frame = -2

Query: 1104 SERGEEEDSEHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYSQIRRPVYVKRT 925
            S+R + E+ EHIDGELVLSIEKLQE+QDELE+VNEEASDKVLEVEQKY++IRRPVY KR 
Sbjct: 4    SKRSKGEEEEHIDGELVLSIEKLQEIQDELERVNEEASDKVLEVEQKYNEIRRPVYTKRN 63

Query: 924  EIIKGIPDFWLTAFMSHPALSDILSEEDQKIFKYVSSLDVEDFKDVKSGYSITFHFNSNP 745
            EII+ IPDFWLTAF+SHPALSD+L+EEDQK+FKY+ SLDVEDFKDVKSGYSITF F  NP
Sbjct: 64   EIIQTIPDFWLTAFLSHPALSDLLTEEDQKVFKYLQSLDVEDFKDVKSGYSITFTFRPNP 123

Query: 744  YFENTKLTKTFSFSDEGVSEIKGTTIKWKEGMGIANGDNHEKKGNKRPLAVESFFTWFSE 565
            YF+ TKL K FSF D+G ++I GTT+KWK+GM + NG + EK+GNKR    ESFFTWFSE
Sbjct: 124  YFDETKLVKVFSFCDDGSTKITGTTLKWKDGMDVTNGISPEKEGNKRSYQEESFFTWFSE 183

Query: 564  TQHSDLSDGFHDEVAEVIKDDLWPNPLQYFNN 469
            TQ  D  DG HDEVAE+IK+DLWPNPL+YFN+
Sbjct: 184  TQ-KDTPDGIHDEVAEIIKEDLWPNPLKYFNS 214


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