BLASTX nr result

ID: Coptis24_contig00001723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001723
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation...   228   1e-84
ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-82
ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|2235...   222   7e-82
ref|XP_004138822.1| PREDICTED: eukaryotic translation initiation...   222   2e-81
ref|NP_001047140.1| Os02g0557600 [Oryza sativa Japonica Group] g...   233   5e-78

>ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation factor 2D [Vitis
           vinifera] gi|297734795|emb|CBI17029.3| unnamed protein
           product [Vitis vinifera]
          Length = 609

 Score =  228 bits (582), Expect(2) = 1e-84
 Identities = 111/150 (74%), Positives = 127/150 (84%)
 Frame = +2

Query: 2   FKKALEAKGQQRLSGADRKKLRRTAKERFQNASDADIDLILPPKTEVTVSKYPNRVLVYS 181
           FKK+LEAK QQRLSGADRKKL+RT KERF+NASD++ID ILPPK E+T+ K  NRV +Y 
Sbjct: 2   FKKSLEAKSQQRLSGADRKKLKRTIKERFRNASDSEIDSILPPKAEITIVKLQNRVHLYG 61

Query: 182 VQNEGEPAFPMLFDVDGRGIDIFPTVYALWKVPELLPAFMLKGGEVSHFIIGGADLMFPG 361
           V    E  FPM FD+DGRG +IFPTVYALWKVP+LLPAF+LKGGEVS F+IGGADLMFPG
Sbjct: 62  V----EGGFPMFFDIDGRGTEIFPTVYALWKVPDLLPAFILKGGEVSRFVIGGADLMFPG 117

Query: 362 ISIPAEGVPPFQAGQPWAVTVPNNVAPIAV 451
           ISIPAEG+P F  G+PWAV VP N+APIAV
Sbjct: 118 ISIPAEGLPSFAEGEPWAVKVPGNLAPIAV 147



 Score =  112 bits (279), Expect(2) = 1e-84
 Identities = 56/73 (76%), Positives = 59/73 (80%)
 Frame = +1

Query: 523 GTTTMSSTEALKAGLRGKALRITHCYRDSLWESVEGHYVPNAGFLEDVVLKDPALALGGL 702
           GTTTMSST ALKAGLRGKALRITH YRDSLWE VEGHYVPNAGFLEDVV +DP+L+    
Sbjct: 148 GTTTMSSTAALKAGLRGKALRITHYYRDSLWELVEGHYVPNAGFLEDVVFEDPSLSSACQ 207

Query: 703 ISDSCGGTCNTSS 741
            SDSC G    SS
Sbjct: 208 ASDSCEGVNEASS 220


>ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|222857691|gb|EEE95238.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  224 bits (570), Expect(2) = 1e-82
 Identities = 108/150 (72%), Positives = 125/150 (83%)
 Frame = +2

Query: 2   FKKALEAKGQQRLSGADRKKLRRTAKERFQNASDADIDLILPPKTEVTVSKYPNRVLVYS 181
           FKKA+EAK  QRLSGADRKKL+RT ++RF  ASDADID +LPPK E+TVSK+ NRV +Y 
Sbjct: 2   FKKAIEAKSHQRLSGADRKKLKRTIRDRFPRASDADIDALLPPKAEITVSKFVNRVHLYG 61

Query: 182 VQNEGEPAFPMLFDVDGRGIDIFPTVYALWKVPELLPAFMLKGGEVSHFIIGGADLMFPG 361
           V+      FPM FDVDGRG +IFPTV+ALWKVPE+LP+F+LKGGEVS F+IGGADLMFPG
Sbjct: 62  VEGN----FPMFFDVDGRGSEIFPTVFALWKVPEMLPSFILKGGEVSQFVIGGADLMFPG 117

Query: 362 ISIPAEGVPPFQAGQPWAVTVPNNVAPIAV 451
           ISIPAEG+P F  G+PWAV VP N APIAV
Sbjct: 118 ISIPAEGLPSFLVGEPWAVKVPGNPAPIAV 147



 Score =  110 bits (274), Expect(2) = 1e-82
 Identities = 52/76 (68%), Positives = 60/76 (78%)
 Frame = +1

Query: 523 GTTTMSSTEALKAGLRGKALRITHCYRDSLWESVEGHYVPNAGFLEDVVLKDPALALGGL 702
           G+TTMS+ EALKAGLRGKALRITH YRD LWESVEGHYVPNAGFLEDVV +DP       
Sbjct: 148 GSTTMSTAEALKAGLRGKALRITHYYRDLLWESVEGHYVPNAGFLEDVVFEDPVFLSSAQ 207

Query: 703 ISDSCGGTCNTSSQHN 750
           + DSC G+ ++S+  N
Sbjct: 208 VPDSCEGSGDSSNHEN 223


>ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|223537304|gb|EEF38935.1|
           ligatin, putative [Ricinus communis]
          Length = 616

 Score =  222 bits (565), Expect(3) = 7e-82
 Identities = 107/150 (71%), Positives = 124/150 (82%)
 Frame = +2

Query: 2   FKKALEAKGQQRLSGADRKKLRRTAKERFQNASDADIDLILPPKTEVTVSKYPNRVLVYS 181
           FKKA+EAK  QRLSGADRKKL+R+ +++F  ASDADID +LPPK ++TV+K+ NRV VY 
Sbjct: 2   FKKAVEAKSHQRLSGADRKKLKRSIRDKFPRASDADIDTLLPPKADITVAKFQNRVHVYG 61

Query: 182 VQNEGEPAFPMLFDVDGRGIDIFPTVYALWKVPELLPAFMLKGGEVSHFIIGGADLMFPG 361
           V    E  FPM FDVDGRG DIFPTV+ALW VPE LP+FMLKGGEVS +I+GGADLMFPG
Sbjct: 62  V----EGGFPMFFDVDGRGTDIFPTVFALWNVPEFLPSFMLKGGEVSRYILGGADLMFPG 117

Query: 362 ISIPAEGVPPFQAGQPWAVTVPNNVAPIAV 451
           ISIPAEG+P F AG+PWAV VP N APIAV
Sbjct: 118 ISIPAEGLPSFSAGEPWAVKVPGNPAPIAV 147



 Score =  102 bits (254), Expect(3) = 7e-82
 Identities = 49/64 (76%), Positives = 54/64 (84%)
 Frame = +1

Query: 523 GTTTMSSTEALKAGLRGKALRITHCYRDSLWESVEGHYVPNAGFLEDVVLKDPALALGGL 702
           G+TTMSS+EA+KAGLRGKALRITH YRD LWESVEGHYVPNAGF EDVV +DPA      
Sbjct: 148 GSTTMSSSEAIKAGLRGKALRITHYYRDLLWESVEGHYVPNAGFFEDVVFEDPAFTSSIQ 207

Query: 703 ISDS 714
           +SDS
Sbjct: 208 VSDS 211



 Score = 28.5 bits (62), Expect(3) = 7e-82
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
 Frame = +3

Query: 819 GEVADIGDVDSEHH------LDKPHIEDYITEEIISETSGLKI-TGDTSVEASNEK 965
           GE AD+ DV SE H      LD    +  I E++ +  S +K+   DT+ E++ E+
Sbjct: 232 GESADVNDVISESHPSTITELDSKESKHDIIEQVTAVVSDMKVMDNDTADESTIEE 287


>ref|XP_004138822.1| PREDICTED: eukaryotic translation initiation factor 2D-like
           [Cucumis sativus]
          Length = 485

 Score =  222 bits (565), Expect(3) = 2e-81
 Identities = 110/150 (73%), Positives = 124/150 (82%)
 Frame = +2

Query: 2   FKKALEAKGQQRLSGADRKKLRRTAKERFQNASDADIDLILPPKTEVTVSKYPNRVLVYS 181
           FKKA EAK QQRLSGADRKKL+RT KERF  ASDADIDL+LPPK E +V+K+ NRV +YS
Sbjct: 2   FKKASEAKLQQRLSGADRKKLKRTVKERFPAASDADIDLLLPPKVEFSVAKFQNRVHIYS 61

Query: 182 VQNEGEPAFPMLFDVDGRGIDIFPTVYALWKVPELLPAFMLKGGEVSHFIIGGADLMFPG 361
           V    E  FPM FDVDGRG +IFPTV+ALW VPELLPAF LKGGEVS F+IGGADLMFPG
Sbjct: 62  V----EGGFPMFFDVDGRGNEIFPTVFALWMVPELLPAFFLKGGEVSRFVIGGADLMFPG 117

Query: 362 ISIPAEGVPPFQAGQPWAVTVPNNVAPIAV 451
           I +PAEG+P F +G+PWAV VP N +PIAV
Sbjct: 118 IHVPAEGLPSFLSGEPWAVKVPGNASPIAV 147



 Score =  102 bits (254), Expect(3) = 2e-81
 Identities = 51/64 (79%), Positives = 52/64 (81%)
 Frame = +1

Query: 523 GTTTMSSTEALKAGLRGKALRITHCYRDSLWESVEGHYVPNAGFLEDVVLKDPALALGGL 702
           G TTMSSTEALKAGLRGKALRI H YRD+LW SVEGHYVPNAGFLED V  DPALA    
Sbjct: 148 GVTTMSSTEALKAGLRGKALRILHYYRDTLWGSVEGHYVPNAGFLEDAVYGDPALASSSQ 207

Query: 703 ISDS 714
           I DS
Sbjct: 208 IDDS 211



 Score = 26.9 bits (58), Expect(3) = 2e-81
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +3

Query: 822 EVADIGDVDSEHHLDKPHI-----EDYITEEIISETSGLKITGDTSVEASN 959
           EV    D  +   LD+P +      D  T+EI+S  + LK+  D S E  N
Sbjct: 232 EVGGSVDETTTDVLDEPGVVPTAQTDSTTDEIVSGVNDLKVVNDISTEEPN 282


>ref|NP_001047140.1| Os02g0557600 [Oryza sativa Japonica Group]
           gi|46390907|dbj|BAD16422.1| putative Ligatin
           (Hepatocellular carcinoma-associated antigen 56) [Oryza
           sativa Japonica Group] gi|113536671|dbj|BAF09054.1|
           Os02g0557600 [Oryza sativa Japonica Group]
          Length = 603

 Score =  233 bits (594), Expect(2) = 5e-78
 Identities = 113/150 (75%), Positives = 127/150 (84%)
 Frame = +2

Query: 2   FKKALEAKGQQRLSGADRKKLRRTAKERFQNASDADIDLILPPKTEVTVSKYPNRVLVYS 181
           FKK ++ K  QRLSGAD+KKLRRTAKERF  ASDAD+D ILPPK EVTV+KYPNRVLVY 
Sbjct: 2   FKKHVDVKALQRLSGADKKKLRRTAKERFPQASDADLDAILPPKVEVTVAKYPNRVLVYG 61

Query: 182 VQNEGEPAFPMLFDVDGRGIDIFPTVYALWKVPELLPAFMLKGGEVSHFIIGGADLMFPG 361
           ++ E    FPMLFD+DGRG ++FPTVYALWKVP+LLPAF LKGGEVS FI+GGADLMFPG
Sbjct: 62  IEGE----FPMLFDIDGRGHELFPTVYALWKVPDLLPAFTLKGGEVSRFILGGADLMFPG 117

Query: 362 ISIPAEGVPPFQAGQPWAVTVPNNVAPIAV 451
           ISIP EG+P FQ GQPW+V VP N APIAV
Sbjct: 118 ISIPPEGLPSFQPGQPWSVKVPGNPAPIAV 147



 Score = 85.5 bits (210), Expect(2) = 5e-78
 Identities = 41/64 (64%), Positives = 49/64 (76%)
 Frame = +1

Query: 523 GTTTMSSTEALKAGLRGKALRITHCYRDSLWESVEGHYVPNAGFLEDVVLKDPALALGGL 702
           G TTMSS EALKAGLRGKALRITH ++DSLW+S +G YVPN GF ED+V++D   A    
Sbjct: 148 GATTMSSNEALKAGLRGKALRITHYFKDSLWDSADGRYVPNEGFYEDIVVEDRNYASPSQ 207

Query: 703 ISDS 714
            +DS
Sbjct: 208 PADS 211