BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001721
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-lik...   201   2e-49
ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic...   186   9e-45
emb|CBI21843.3| unnamed protein product [Vitis vinifera]              186   9e-45
ref|XP_002520230.1| thioredoxin m(mitochondrial)-type, putative ...   185   1e-44
gb|ABS84825.1| thioredoxin [Limonium bicolor]                         185   1e-44

>ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-like [Vitis vinifera]
           gi|302143024|emb|CBI20319.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score =  201 bits (511), Expect = 2e-49
 Identities = 104/190 (54%), Positives = 133/190 (70%), Gaps = 4/190 (2%)
 Frame = +3

Query: 42  MTIVLESFLLPVSINVSSNNSLPMMGSAISC----KKIRSLPQFNGLKIQFGSLKGGLVF 209
           M  VL+S  +P S  + S+   P+  S +      + +  LP+F+GLKIQ  SL    V 
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQ-PSLASRSVA 59

Query: 210 VKGKNERSARRSGMVYCEGGQETALEVPEVAEGTWKXXXXXXXXXXXXEFWAPWCGPCRM 389
             G++ R  RR G V CE  QETA+EVP V + TW+            EFWAPWCGPCRM
Sbjct: 60  AAGRSSRVGRRVGGVVCEA-QETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRM 118

Query: 390 IHPVIDELAKEYAGKLKCFKLNTDESPAVATQYAIRSIPTVLMFKNGEKKDAVVGAVPKT 569
           IHPVI+ELAK+Y GKLKC+K+NTDESP++AT+Y IRSIPTV++FK+GEKK+A++GAVPK+
Sbjct: 119 IHPVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKS 178

Query: 570 TLTTSIEKFL 599
           TLTTSIEKFL
Sbjct: 179 TLTTSIEKFL 188


>ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic-like [Vitis vinifera]
          Length = 189

 Score =  186 bits (471), Expect = 9e-45
 Identities = 91/151 (60%), Positives = 110/151 (72%)
 Frame = +3

Query: 147 SLPQFNGLKIQFGSLKGGLVFVKGKNERSARRSGMVYCEGGQETALEVPEVAEGTWKXXX 326
           SLP+F+GLKI   S    L  +  +  R  RR G + CE  QETAL+VP V + TW+   
Sbjct: 41  SLPEFSGLKIHTNS-SSALASLNSRTSRVCRRGGRIVCEA-QETALDVPIVTDTTWQSLV 98

Query: 327 XXXXXXXXXEFWAPWCGPCRMIHPVIDELAKEYAGKLKCFKLNTDESPAVATQYAIRSIP 506
                    EFWAPWCGPCR+IHPV+ EL++EYAGKLK FKLNTD+SP++ATQY IRS+P
Sbjct: 99  LKATGPVLVEFWAPWCGPCRIIHPVVAELSEEYAGKLKFFKLNTDDSPSIATQYGIRSVP 158

Query: 507 TVLMFKNGEKKDAVVGAVPKTTLTTSIEKFL 599
           T ++F NGEKKDAV+GAVPKTTLT SIEKFL
Sbjct: 159 TTMIFINGEKKDAVLGAVPKTTLTASIEKFL 189


>emb|CBI21843.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  186 bits (471), Expect = 9e-45
 Identities = 91/151 (60%), Positives = 110/151 (72%)
 Frame = +3

Query: 147 SLPQFNGLKIQFGSLKGGLVFVKGKNERSARRSGMVYCEGGQETALEVPEVAEGTWKXXX 326
           SLP+F+GLKI   S    L  +  +  R  RR G + CE  QETAL+VP V + TW+   
Sbjct: 15  SLPEFSGLKIHTNS-SSALASLNSRTSRVCRRGGRIVCEA-QETALDVPIVTDTTWQSLV 72

Query: 327 XXXXXXXXXEFWAPWCGPCRMIHPVIDELAKEYAGKLKCFKLNTDESPAVATQYAIRSIP 506
                    EFWAPWCGPCR+IHPV+ EL++EYAGKLK FKLNTD+SP++ATQY IRS+P
Sbjct: 73  LKATGPVLVEFWAPWCGPCRIIHPVVAELSEEYAGKLKFFKLNTDDSPSIATQYGIRSVP 132

Query: 507 TVLMFKNGEKKDAVVGAVPKTTLTTSIEKFL 599
           T ++F NGEKKDAV+GAVPKTTLT SIEKFL
Sbjct: 133 TTMIFINGEKKDAVLGAVPKTTLTASIEKFL 163


>ref|XP_002520230.1| thioredoxin m(mitochondrial)-type, putative [Ricinus communis]
           gi|223540576|gb|EEF42142.1| thioredoxin
           m(mitochondrial)-type, putative [Ricinus communis]
          Length = 181

 Score =  185 bits (469), Expect = 1e-44
 Identities = 98/186 (52%), Positives = 121/186 (65%)
 Frame = +3

Query: 42  MTIVLESFLLPVSINVSSNNSLPMMGSAISCKKIRSLPQFNGLKIQFGSLKGGLVFVKGK 221
           M  VLES  +P + +    NS   + S+++ +   +LP   GLK+   S+       +  
Sbjct: 1   MATVLESLSIPRASSALPPNS--SLSSSVNRRPAVTLPVAKGLKVS--SVTTARSLARSP 56

Query: 222 NERSARRSGMVYCEGGQETALEVPEVAEGTWKXXXXXXXXXXXXEFWAPWCGPCRMIHPV 401
                 R G + CE  Q+TA+EV  V + TWK            EFWAPWCGPCRMIHPV
Sbjct: 57  PRSQLARPGRIVCEA-QDTAVEVLAVTDQTWKSLVLESEFPVLVEFWAPWCGPCRMIHPV 115

Query: 402 IDELAKEYAGKLKCFKLNTDESPAVATQYAIRSIPTVLMFKNGEKKDAVVGAVPKTTLTT 581
           ID LA EY GKLKC+KLNTDESP+VATQY IRSIPTV++FK+GEKKDA++GAVPKTTLT 
Sbjct: 116 IDALAGEYVGKLKCYKLNTDESPSVATQYGIRSIPTVMIFKDGEKKDAIIGAVPKTTLTA 175

Query: 582 SIEKFL 599
           SIEKFL
Sbjct: 176 SIEKFL 181


>gb|ABS84825.1| thioredoxin [Limonium bicolor]
          Length = 187

 Score =  185 bits (469), Expect = 1e-44
 Identities = 100/191 (52%), Positives = 126/191 (65%), Gaps = 5/191 (2%)
 Frame = +3

Query: 42  MTIVLESFLLPVSINVSSNNSLPM--MGSAISCKKIRS---LPQFNGLKIQFGSLKGGLV 206
           M  V ES  +P S  V+S    P+  + S +S    R    L +F+GL++   +    L 
Sbjct: 1   MAAVFESVSVPRSSIVTSAALAPIVSLSSVVSFSCARQPVKLAKFSGLRVISSASTRRL- 59

Query: 207 FVKGKNERSARRSGMVYCEGGQETALEVPEVAEGTWKXXXXXXXXXXXXEFWAPWCGPCR 386
             +       RRSG V CE   +TA+EV  V + +W+            EFWAPWCGPCR
Sbjct: 60  --RPLRSSGVRRSGRVVCES-PDTAVEVQSVTDSSWQSLVLESDSPVLVEFWAPWCGPCR 116

Query: 387 MIHPVIDELAKEYAGKLKCFKLNTDESPAVATQYAIRSIPTVLMFKNGEKKDAVVGAVPK 566
           MIHP+IDELAK+Y GKLKCFK+NTDESP++AT+Y IRSIPTV++FKNGEKKDAV+GAVPK
Sbjct: 117 MIHPIIDELAKQYTGKLKCFKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDAVIGAVPK 176

Query: 567 TTLTTSIEKFL 599
           +TLTTSIEKFL
Sbjct: 177 STLTTSIEKFL 187