BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001669
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum ly...   399   e-109
emb|CBI21000.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3...   397   e-108
emb|CBI28152.3| unnamed protein product [Vitis vinifera]              397   e-108
gb|AAT40986.1| RAN [Nicotiana sylvestris] gi|48249482|gb|AAT4098...   397   e-108

>ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum lycopersicum]
            gi|585777|sp|P38546.1|RAN1_SOLLC RecName:
            Full=GTP-binding nuclear protein Ran1; AltName:
            Full=Ras-related nuclear protein 1
            gi|453561|gb|AAC37402.1| Ran protein/TC4 protein [Solanum
            lycopersicum] gi|77745509|gb|ABB02653.1| Ran/TC4-like
            protein [Solanum tuberosum] gi|82623375|gb|ABB87102.1|
            Ran protein/TC4 protein-like [Solanum tuberosum]
          Length = 221

 Score =  399 bits (1026), Expect = e-109
 Identities = 192/212 (90%), Positives = 194/212 (91%)
 Frame = -2

Query: 1045 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 866
            DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT
Sbjct: 10   DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69

Query: 865  AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 686
            AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV
Sbjct: 70   AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 129

Query: 685  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPE 506
            KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPE
Sbjct: 130  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPE 189

Query: 505  VHIDXXXXXXXXXXXXXASHQPLPXXXDELFE 410
            VHID             A++QPLP   DE FE
Sbjct: 190  VHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221


>emb|CBI21000.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  397 bits (1020), Expect = e-108
 Identities = 191/212 (90%), Positives = 193/212 (91%)
 Frame = -2

Query: 1045 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 866
            DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT
Sbjct: 43   DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 102

Query: 865  AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 686
            AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV
Sbjct: 103  AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 162

Query: 685  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPE 506
            KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPE
Sbjct: 163  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPE 222

Query: 505  VHIDXXXXXXXXXXXXXASHQPLPXXXDELFE 410
            VHID             A+ QPLP   D+ FE
Sbjct: 223  VHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254


>ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera]
            gi|225445410|ref|XP_002285018.1| PREDICTED: GTP-binding
            nuclear protein Ran-3-like [Vitis vinifera]
          Length = 221

 Score =  397 bits (1020), Expect = e-108
 Identities = 191/212 (90%), Positives = 193/212 (91%)
 Frame = -2

Query: 1045 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 866
            DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT
Sbjct: 10   DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69

Query: 865  AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 686
            AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV
Sbjct: 70   AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 129

Query: 685  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPE 506
            KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPE
Sbjct: 130  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPE 189

Query: 505  VHIDXXXXXXXXXXXXXASHQPLPXXXDELFE 410
            VHID             A+ QPLP   D+ FE
Sbjct: 190  VHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221


>emb|CBI28152.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  397 bits (1020), Expect = e-108
 Identities = 191/212 (90%), Positives = 193/212 (91%)
 Frame = -2

Query: 1045 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 866
            DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT
Sbjct: 49   DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 108

Query: 865  AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 686
            AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV
Sbjct: 109  AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 168

Query: 685  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPE 506
            KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPE
Sbjct: 169  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPE 228

Query: 505  VHIDXXXXXXXXXXXXXASHQPLPXXXDELFE 410
            VHID             A+ QPLP   D+ FE
Sbjct: 229  VHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 260


>gb|AAT40986.1| RAN [Nicotiana sylvestris] gi|48249482|gb|AAT40987.1| RAN [Nicotiana
            sylvestris]
          Length = 221

 Score =  397 bits (1019), Expect = e-108
 Identities = 192/212 (90%), Positives = 193/212 (91%)
 Frame = -2

Query: 1045 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 866
            DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT
Sbjct: 10   DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69

Query: 865  AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 686
            AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV
Sbjct: 70   AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 129

Query: 685  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPE 506
            KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPE
Sbjct: 130  KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPE 189

Query: 505  VHIDXXXXXXXXXXXXXASHQPLPXXXDELFE 410
            V ID             A+ QPLP   DE FE
Sbjct: 190  VQIDLAAQQLHEQELLQAAAQPLPDDDDEAFE 221