BLASTX nr result
ID: Coptis24_contig00001636
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00001636 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000... 61 8e-08 ref|XP_004137307.1| PREDICTED: uncharacterized protein At3g15000... 61 8e-08 ref|XP_003543219.1| PREDICTED: uncharacterized protein At3g15000... 59 3e-07 ref|XP_003540481.1| PREDICTED: uncharacterized protein At3g15000... 59 3e-07 ref|XP_002285388.1| PREDICTED: uncharacterized protein At3g15000... 59 5e-07 >ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like, partial [Cucumis sativus] Length = 278 Score = 61.2 bits (147), Expect = 8e-08 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Frame = +2 Query: 149 RVRPLGCV-SNELRNFTSIRGLRGLSTRATTSSLNDQNPNWSNRPPKETI 295 R+RPL + + + R ++ LR STRAT+SSLND NPNWSNRPPKETI Sbjct: 45 RLRPLAAILAADFRCHSAAPSLRDFSTRATSSSLNDPNPNWSNRPPKETI 94 >ref|XP_004137307.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Cucumis sativus] Length = 410 Score = 61.2 bits (147), Expect = 8e-08 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Frame = +2 Query: 149 RVRPLGCV-SNELRNFTSIRGLRGLSTRATTSSLNDQNPNWSNRPPKETI 295 R+RPL + + + R ++ LR STRAT+SSLND NPNWSNRPPKETI Sbjct: 45 RLRPLAAILAADFRCHSAAPSLRDFSTRATSSSLNDPNPNWSNRPPKETI 94 >ref|XP_003543219.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Glycine max] Length = 401 Score = 59.3 bits (142), Expect = 3e-07 Identities = 27/29 (93%), Positives = 27/29 (93%) Frame = +2 Query: 209 LRGLSTRATTSSLNDQNPNWSNRPPKETI 295 LR LSTRATTSSLND NPNWSNRPPKETI Sbjct: 59 LRALSTRATTSSLNDPNPNWSNRPPKETI 87 >ref|XP_003540481.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Glycine max] Length = 363 Score = 59.3 bits (142), Expect = 3e-07 Identities = 27/29 (93%), Positives = 27/29 (93%) Frame = +2 Query: 209 LRGLSTRATTSSLNDQNPNWSNRPPKETI 295 LR LSTRATTSSLND NPNWSNRPPKETI Sbjct: 61 LRALSTRATTSSLNDPNPNWSNRPPKETI 89 >ref|XP_002285388.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial [Vitis vinifera] Length = 421 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Frame = +2 Query: 149 RVRPLGCVS-NELRNFTSIRGLRGLSTRATTSSLNDQNPNWSNRPPKETI 295 R+RPL + + LR+ R STR T+SSLND NPNWSNRPPKETI Sbjct: 40 RLRPLSAAAVSVLRHLPQSTSARSFSTRQTSSSLNDPNPNWSNRPPKETI 89