BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001635
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276776.1| PREDICTED: 60S ribosomal protein L29-1 [Viti...   119   3e-25
dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]                 119   3e-25
ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like ...   117   1e-24
ref|XP_004173787.1| PREDICTED: 60S ribosomal protein L29-1-like,...   116   2e-24
ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatu...   115   4e-24

>ref|XP_002276776.1| PREDICTED: 60S ribosomal protein L29-1 [Vitis vinifera]
           gi|147802163|emb|CAN65958.1| hypothetical protein
           VITISV_007494 [Vitis vinifera]
           gi|296083268|emb|CBI22904.3| unnamed protein product
           [Vitis vinifera]
          Length = 61

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = -1

Query: 433 MAKSKNHTAHNQSHKAHKNGIKKPRKHRNASTKGMDPKFLRNQRYARKHNNKSAETGTEE 254
           MAKSKNHTAHNQS+KAHKNGIKKPRKHR+ASTKGMDPKFLRNQRYARKHN KS E+ TEE
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPRKHRHASTKGMDPKFLRNQRYARKHNKKSGESATEE 60

Query: 253 E 251
           E
Sbjct: 61  E 61


>dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]
          Length = 61

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/61 (86%), Positives = 58/61 (95%)
 Frame = -1

Query: 433 MAKSKNHTAHNQSHKAHKNGIKKPRKHRNASTKGMDPKFLRNQRYARKHNNKSAETGTEE 254
           MAKSKNHTAHNQSHKAH+NGIKKPRKHR+ ST+GMDPKFLRNQRYARKHNNK+ E+ TEE
Sbjct: 1   MAKSKNHTAHNQSHKAHRNGIKKPRKHRHTSTRGMDPKFLRNQRYARKHNNKTGESATEE 60

Query: 253 E 251
           E
Sbjct: 61  E 61


>ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]
           gi|356529227|ref|XP_003533197.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
           gi|356564681|ref|XP_003550578.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
          Length = 61

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/61 (86%), Positives = 57/61 (93%)
 Frame = -1

Query: 433 MAKSKNHTAHNQSHKAHKNGIKKPRKHRNASTKGMDPKFLRNQRYARKHNNKSAETGTEE 254
           MAKSKNHTAHNQS+KAHKNGIKKP++HR+ STKGMDPKFLRNQRYARKHN KS ET TEE
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE 60

Query: 253 E 251
           E
Sbjct: 61  E 61


>ref|XP_004173787.1| PREDICTED: 60S ribosomal protein L29-1-like, partial [Cucumis
           sativus]
          Length = 85

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = -1

Query: 436 EMAKSKNHTAHNQSHKAHKNGIKKPRKHRNASTKGMDPKFLRNQRYARKHNNKSAETGTE 257
           EMAKSKNHTAHNQSHKAHKNGIKKPRKHR+ STKGMDPKFLRNQRYA+KHN KS E  + 
Sbjct: 24  EMAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASG 83

Query: 256 EE 251
           EE
Sbjct: 84  EE 85


>ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatula]
           gi|355510808|gb|AES91950.1| 60S ribosomal protein L29
           [Medicago truncatula]
          Length = 445

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -1

Query: 436 EMAKSKNHTAHNQSHKAHKNGIKKPRKHRNASTKGMDPKFLRNQRYARKHNNKSAETGTE 257
           EMAKSKNHTAHNQS+KAHKNGIKKP++HR+ STKGMDPKFLRNQRYARKHN K+ E  TE
Sbjct: 384 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNGEIATE 443

Query: 256 EE 251
           EE
Sbjct: 444 EE 445



 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/84 (61%), Positives = 63/84 (75%)
 Frame = -1

Query: 502 LLTSFTKTRQRLKTHSSLPQFREMAKSKNHTAHNQSHKAHKNGIKKPRKHRNASTKGMDP 323
           L +S +    +    S+     EMAKSKNHTAHNQS+KAHKNGIKKP++HR+ STKGMDP
Sbjct: 114 LYSSLSSCSAQKNPSSTASSELEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDP 173

Query: 322 KFLRNQRYARKHNNKSAETGTEEE 251
           KFLRNQRYARKHN K+ E  + E+
Sbjct: 174 KFLRNQRYARKHNKKNGEVASAED 197