BLASTX nr result

ID: Coptis24_contig00001624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001624
         (1633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL278...   333   e-161
gb|AEK70332.1| actin [Paeonia lactiflora] gi|340784775|gb|AEK703...   333   e-161
gb|AEK70331.1| actin [Paeonia suffruticosa]                           333   e-161
gb|ACL97684.1| actin 1 [Gossypium hirsutum]                           333   e-161
gb|AAN40685.1| actin [Stevia rebaudiana]                              333   e-161

>gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL27885.1| actin
            [Helianthus annuus] gi|219563048|gb|ACL27886.1| actin
            [Helianthus annuus] gi|306922316|dbj|BAJ17659.1| actin
            [Gynura bicolor]
          Length = 377

 Score =  333 bits (853), Expect(2) = e-161
 Identities = 165/165 (100%), Positives = 165/165 (100%)
 Frame = -2

Query: 1632 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 1453
            AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60   AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119

Query: 1452 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 1273
            KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR
Sbjct: 120  KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179

Query: 1272 LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 1138
            LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD
Sbjct: 180  LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 224



 Score =  264 bits (674), Expect(2) = e-161
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -3

Query: 1025 QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 846
            QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM
Sbjct: 248  QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 307

Query: 845  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 666
            FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES
Sbjct: 308  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 367

Query: 665  GPSIVHRKCF 636
            GPSIVHRKCF
Sbjct: 368  GPSIVHRKCF 377


>gb|AEK70332.1| actin [Paeonia lactiflora] gi|340784775|gb|AEK70337.1| actin [Paeonia
            lactiflora] gi|402693643|gb|AFQ89888.1| actin [Paeonia
            lactiflora]
          Length = 377

 Score =  333 bits (853), Expect(2) = e-161
 Identities = 165/165 (100%), Positives = 165/165 (100%)
 Frame = -2

Query: 1632 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 1453
            AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60   AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119

Query: 1452 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 1273
            KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR
Sbjct: 120  KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179

Query: 1272 LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 1138
            LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD
Sbjct: 180  LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 224



 Score =  264 bits (674), Expect(2) = e-161
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -3

Query: 1025 QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 846
            QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM
Sbjct: 248  QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 307

Query: 845  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 666
            FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES
Sbjct: 308  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 367

Query: 665  GPSIVHRKCF 636
            GPSIVHRKCF
Sbjct: 368  GPSIVHRKCF 377


>gb|AEK70331.1| actin [Paeonia suffruticosa]
          Length = 377

 Score =  333 bits (853), Expect(2) = e-161
 Identities = 165/165 (100%), Positives = 165/165 (100%)
 Frame = -2

Query: 1632 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 1453
            AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60   AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119

Query: 1452 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 1273
            KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR
Sbjct: 120  KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179

Query: 1272 LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 1138
            LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD
Sbjct: 180  LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 224



 Score =  264 bits (674), Expect(2) = e-161
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -3

Query: 1025 QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 846
            QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM
Sbjct: 248  QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 307

Query: 845  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 666
            FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES
Sbjct: 308  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 367

Query: 665  GPSIVHRKCF 636
            GPSIVHRKCF
Sbjct: 368  GPSIVHRKCF 377


>gb|ACL97684.1| actin 1 [Gossypium hirsutum]
          Length = 377

 Score =  333 bits (853), Expect(2) = e-161
 Identities = 165/165 (100%), Positives = 165/165 (100%)
 Frame = -2

Query: 1632 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 1453
            AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60   AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119

Query: 1452 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 1273
            KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR
Sbjct: 120  KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179

Query: 1272 LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 1138
            LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD
Sbjct: 180  LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 224



 Score =  264 bits (674), Expect(2) = e-161
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -3

Query: 1025 QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 846
            QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM
Sbjct: 248  QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 307

Query: 845  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 666
            FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES
Sbjct: 308  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 367

Query: 665  GPSIVHRKCF 636
            GPSIVHRKCF
Sbjct: 368  GPSIVHRKCF 377


>gb|AAN40685.1| actin [Stevia rebaudiana]
          Length = 377

 Score =  333 bits (853), Expect(2) = e-161
 Identities = 165/165 (100%), Positives = 165/165 (100%)
 Frame = -2

Query: 1632 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 1453
            AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60   AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119

Query: 1452 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 1273
            KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR
Sbjct: 120  KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179

Query: 1272 LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 1138
            LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD
Sbjct: 180  LDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALD 224



 Score =  264 bits (674), Expect(2) = e-161
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -3

Query: 1025 QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 846
            QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM
Sbjct: 248  QVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 307

Query: 845  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 666
            FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES
Sbjct: 308  FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 367

Query: 665  GPSIVHRKCF 636
            GPSIVHRKCF
Sbjct: 368  GPSIVHRKCF 377


Top