BLASTX nr result

ID: Coptis24_contig00001622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001622
         (2454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855...   130   2e-27
ref|XP_002524764.1| conserved hypothetical protein [Ricinus comm...   104   1e-19
ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cuc...    94   1e-16
ref|XP_004140095.1| PREDICTED: uncharacterized protein LOC101223...    94   1e-16
ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-16

>ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855240 [Vitis vinifera]
          Length = 196

 Score =  130 bits (327), Expect = 2e-27
 Identities = 88/207 (42%), Positives = 112/207 (54%), Gaps = 9/207 (4%)
 Frame = +3

Query: 330 METLVVVPQHRNQYYGRNGSYVHDIY-GSPNGGFRDFNCR-FLAREAILSTPLKPCYVAS 503
           METL+VVPQHRNQYYGR+ ++  D +  SP+  FR+ NCR F +   IL TPLK C    
Sbjct: 1   METLLVVPQHRNQYYGRSKAHGSDRFVSSPSSDFREINCRTFESGAGILPTPLKACTTPV 60

Query: 504 A------DKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISL-KVGNLEKSFSDDLSYA 662
           A       + TPSP        HSE  K+ +  G S AI I   +  N EKSF DD SY 
Sbjct: 61  AKGACPLSQKTPSP--------HSEDSKQAKTTGKSSAIAIPFAEASNYEKSFHDDFSYC 112

Query: 663 ELFAGXXXXXXXXXXXXXXXXXXLRQKRSVSLELPVKEYGLKIHHVAKSAPSSPRGGSCH 842
           EL+AG                  +R KR+VSL+LP     +K+H +AKSAP SP      
Sbjct: 113 ELWAGPAYSNSPPPSSLPIPKFSMRPKRTVSLDLPGSAPVIKMHAIAKSAPPSP------ 166

Query: 843 SRDHFFRSTASDALATKDLRRILNLDI 923
           +R+ +         ATK+LRRILNL+I
Sbjct: 167 TREPYPSPRDFTDFATKNLRRILNLNI 193


>ref|XP_002524764.1| conserved hypothetical protein [Ricinus communis]
           gi|223535948|gb|EEF37607.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  104 bits (260), Expect = 1e-19
 Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
 Frame = +3

Query: 330 METLVVVPQHRN-QYYGRNGSY--VHDIYGSPNGGFRDFNCR-FLAREAILSTPLKPCYV 497
           METLVVV QHRN QYY R  SY      Y SP   FR+ NCR F +   IL TP + C  
Sbjct: 1   METLVVVNQHRNHQYYSRLKSYKPARCGYSSPTSHFREINCRTFESGAGILPTPFRTC-- 58

Query: 498 ASADKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDDLS------- 656
                 TP         +       ++ +  + ++PIS+ +     SF D+L        
Sbjct: 59  -----TTPVTHTTPTSTSQKTPPPTIKTHALASSLPISINIPTKGTSFDDELGITGENSP 113

Query: 657 YAELFAGXXXXXXXXXXXXXXXXXXLRQKRSVSLELPVKEYGLKIHHVAKSAPSSPRGGS 836
           ++E +AG                  +R KR+VSLELPV + G+K+H  AKSAPSSP    
Sbjct: 114 FSERWAGPAYSNSPPPSSLPIPKFSMRPKRTVSLELPVCDSGIKVHSFAKSAPSSPTREH 173

Query: 837 CHSRDHFFRSTASDALATKDLRRILNLDI 923
             S      S  S   ATK LRRILNLD+
Sbjct: 174 NSSTRELLLSVDS---ATKTLRRILNLDV 199


>ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cucumis sativus]
          Length = 204

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 80/209 (38%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
 Frame = +3

Query: 330 METLVVVPQHRNQYYGRNGSYVHDIYGS-PNGGFRDFNCR-FLAREAILSTPLKPCYVAS 503
           ME +VV+ QHRNQYY R   +    +GS  +  FR  NCR F +   IL TPLK C  + 
Sbjct: 1   MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACN-SE 59

Query: 504 ADKMTPSPK-PRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD-----LSYAE 665
            +   PSPK P     ++SE  K+L     S  IPI  K  N   +F ++      S++E
Sbjct: 60  TEHFYPSPKTPPPCLTSNSENRKQLATM-RSTPIPIKPKSSNQSNAFHEEFYDRSFSFSE 118

Query: 666 LFAGXXXXXXXXXXXXXXXXXXLRQKRSVSLELPVKEYGLKIHH-VAKSAPSSPRGGSCH 842
           L+AG                  +  KR+ SLEL       ++HH  AKSAP SP      
Sbjct: 119 LWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNF 177

Query: 843 SRDHFFRSTASDALATKDLRRILNLDIDN 929
           S   FF S  S   ATK LRRILNLD+ N
Sbjct: 178 SARFFFHSADS---ATKTLRRILNLDVAN 203


>ref|XP_004140095.1| PREDICTED: uncharacterized protein LOC101223034 [Cucumis sativus]
          Length = 204

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 80/209 (38%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
 Frame = +3

Query: 330 METLVVVPQHRNQYYGRNGSYVHDIYGS-PNGGFRDFNCR-FLAREAILSTPLKPCYVAS 503
           ME +VV+ QHRNQYY R   +    +GS  +  FR  NCR F +   IL TPLK C  + 
Sbjct: 1   MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACN-SE 59

Query: 504 ADKMTPSPK-PRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD-----LSYAE 665
            +   PSPK P     ++SE  K+L     S  IPI  K  N   +F ++      S++E
Sbjct: 60  TEHFYPSPKTPPPCLTSNSENRKQLATM-RSAPIPIKPKSSNQSNAFHEEFYDRSFSFSE 118

Query: 666 LFAGXXXXXXXXXXXXXXXXXXLRQKRSVSLELPVKEYGLKIHH-VAKSAPSSPRGGSCH 842
           L+AG                  +  KR+ SLEL       ++HH  AKSAP SP      
Sbjct: 119 LWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNF 177

Query: 843 SRDHFFRSTASDALATKDLRRILNLDIDN 929
           S   FF S  S   ATK LRRILNLD+ N
Sbjct: 178 SARFFFHSADS---ATKTLRRILNLDVAN 203


>ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|222843833|gb|EEE81380.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 79/220 (35%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
 Frame = +3

Query: 330 METLVVVPQHRNQYYGRNGSYVHDIYG-SPNGGFRDFNCR-FLAREAILSTPLKPCYV-- 497
           METLVVV QHRNQYY +  S     +G SP+  F+D NCR F +R+ IL TP +      
Sbjct: 1   METLVVVAQHRNQYYTKVRSNGPAKFGTSPSKHFKDINCRTFQSRDGILPTPFQASTTTV 60

Query: 498 ---------ASADKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD 650
                     S    TP P  + QF +H       +    S  I I++ V   E SF +D
Sbjct: 61  TKITSHVPPTSNSPKTPPPAIKSQFNSHPVDNGNFKTISKSSPITINVTVPRKETSFYED 120

Query: 651 -------LSYAELFAGXXXXXXXXXXXXXXXXXXLR-QKRSVSLELPVKE-YGLKIHHVA 803
                  L ++E +AG                  +R  KR+VSL+LPV       +   A
Sbjct: 121 MGFGNENLPFSERWAGPAYSNSPPPSSLPIPKFSMRPPKRTVSLDLPVNHGTDFNVQPTA 180

Query: 804 KSAPSSPRGGSCHSRDHFFRSTASDALATKDLRRILNLDI 923
           KSAP+SP      S    F S  S   ATK LRRILNLD+
Sbjct: 181 KSAPASPSREHSPSMKDLFLSADS---ATKTLRRILNLDV 217


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