BLASTX nr result

ID: Coptis24_contig00001620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001620
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...   131   7e-29
ref|XP_002510760.1| conserved hypothetical protein [Ricinus comm...   121   7e-26
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   119   3e-25
ref|XP_004171545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   118   6e-25
ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660...   118   6e-25

>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   SPDVPFALTFSSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLSSS 181
           SPDVPFA   SS+MDLK   +++Y+ ANDLQATY LYP SPASSLISPIS TSGDCLSSS
Sbjct: 161 SPDVPFAQFLSSSMDLKSAGKTNYIAANDLQATYSLYPGSPASSLISPISRTSGDCLSSS 220

Query: 182 FPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYPAASPQFHL 352
           FPEREFP +W  +              RLFGLDT  S+   +S+D+ FF PA   QF+L
Sbjct: 221 FPEREFPPRWDPSISPQNAKYPRNGSGRLFGLDTASSS---ISQDSNFFCPATFAQFYL 276


>ref|XP_002510760.1| conserved hypothetical protein [Ricinus communis]
           gi|223551461|gb|EEF52947.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  121 bits (303), Expect = 7e-26
 Identities = 67/119 (56%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   SPDVPFALTFSSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLSSS 181
           SPDVPFA   SS++DLK T +++Y+ ANDLQATY LYP SPASSLISPIS TSGDCLSSS
Sbjct: 155 SPDVPFAHFLSSSVDLKSTEKANYIAANDLQATYSLYPGSPASSLISPISRTSGDCLSSS 214

Query: 182 FPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYPAASPQFHL 352
           FP REFP  W                 RLF  DT  +   M+S+DT FF PA   +F+L
Sbjct: 215 FPGREFPPHWDPTVSPQNGKYSRSNSGRLFVHDT--TGGSMVSQDTNFFCPATFARFYL 271


>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/119 (56%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   SPDVPFALTFSSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLSSS 181
           SPDVPFA   SS++DLK   + +Y+TANDLQATY LYP SPASSLISPIS  SGDCLSSS
Sbjct: 155 SPDVPFAHFLSSSVDLKNNGKGNYITANDLQATYSLYPGSPASSLISPISRNSGDCLSSS 214

Query: 182 FPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYPAASPQFHL 352
           FPEREF  +W  +              R+ G DT  S   M S+DT FF PA   QF+L
Sbjct: 215 FPEREFHPQWDSSLSPENGKYQRTGSGRVSGHDT--SGVTMASQDTNFFCPATYAQFYL 271


>ref|XP_004171545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Cucumis sativus]
          Length = 421

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/119 (52%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   SPDVPFALTFSSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLSSS 181
           SPDVPFA   SS+ DLKGT +++Y+ +NDLQA Y LYP SPASSL+SPIS TSGDCLSSS
Sbjct: 155 SPDVPFAQFLSSSEDLKGTGKANYIASNDLQAAYSLYPGSPASSLVSPISRTSGDCLSSS 214

Query: 182 FPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYPAASPQFHL 352
           FPER+F  +W  +A             RLFG +   ++  + S+D+ FF PA   QF+L
Sbjct: 215 FPERDFRPQWNSSASLQDGKYPRSGSGRLFGNEKAGTS--LASQDSNFFCPATFAQFYL 271


>ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660-like [Cucumis sativus]
          Length = 469

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/119 (52%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   SPDVPFALTFSSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLSSS 181
           SPDVPFA   SS+ DLKGT +++Y+ +NDLQA Y LYP SPASSL+SPIS TSGDCLSSS
Sbjct: 155 SPDVPFAQFLSSSEDLKGTGKANYIASNDLQAAYSLYPGSPASSLVSPISRTSGDCLSSS 214

Query: 182 FPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYPAASPQFHL 352
           FPER+F  +W  +A             RLFG +   ++  + S+D+ FF PA   QF+L
Sbjct: 215 FPERDFRPQWNSSASLQDGKYPRSGSGRLFGNEKAGTS--LASQDSNFFCPATFAQFYL 271


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