BLASTX nr result

ID: Coptis24_contig00001566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001566
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|2...   189   7e-46
ref|XP_003599342.1| hypothetical protein MTR_3g031830 [Medicago ...   186   5e-45
ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265...   184   2e-44
emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera]   184   2e-44

>ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|222850379|gb|EEE87926.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  189 bits (479), Expect = 7e-46
 Identities = 87/109 (79%), Positives = 94/109 (86%), Gaps = 1/109 (0%)
 Frame = +3

Query: 447 EPRPTTDVPSSSI-VPVTTEAAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 623
           EP P+    S+S  +P   +  GSS  APPSRYESQKRRDWNTFLQYLKNHKPPLTLARC
Sbjct: 17  EPGPSAGSSSASASLPQQQQPEGSSPPAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 76

Query: 624 SGAHVIEFLKYLDQFGKTKVHLSGCTYFGHPNPPAPCACPLKQAWGSLD 770
           SGAHVIEFLKYLDQFGKTKVH++GC YFGHPNPPAPC+CPLKQAWGSLD
Sbjct: 77  SGAHVIEFLKYLDQFGKTKVHITGCPYFGHPNPPAPCSCPLKQAWGSLD 125


>ref|XP_003599342.1| hypothetical protein MTR_3g031830 [Medicago truncatula]
           gi|355488390|gb|AES69593.1| hypothetical protein
           MTR_3g031830 [Medicago truncatula]
          Length = 223

 Score =  186 bits (472), Expect = 5e-45
 Identities = 87/109 (79%), Positives = 94/109 (86%), Gaps = 4/109 (3%)
 Frame = +3

Query: 456 PTTDVPSSSIVP-VTTEAAGSSVA---APPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 623
           P+  +PSS+  P +  +  GSS A   APPSRYESQKRRDWNTFLQYL+NHKPPLTL RC
Sbjct: 11  PSEQLPSSTTSPPIVVQPEGSSPAPPPAPPSRYESQKRRDWNTFLQYLQNHKPPLTLVRC 70

Query: 624 SGAHVIEFLKYLDQFGKTKVHLSGCTYFGHPNPPAPCACPLKQAWGSLD 770
           SGAHVIEFLKYLDQFGKTKVH+SGC YFGHPNPPAPCACPLKQAWGSLD
Sbjct: 71  SGAHVIEFLKYLDQFGKTKVHVSGCPYFGHPNPPAPCACPLKQAWGSLD 119


>ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|222845754|gb|EEE83301.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  185 bits (469), Expect = 1e-44
 Identities = 86/109 (78%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
 Frame = +3

Query: 447 EPRPTTDVP-SSSIVPVTTEAAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 623
           EP P+     SSS      +  GSS  APPSRYESQKRRDWNTFLQY+KNHKPPLTLARC
Sbjct: 17  EPCPSAATAGSSSASQPQQQPEGSSPPAPPSRYESQKRRDWNTFLQYIKNHKPPLTLARC 76

Query: 624 SGAHVIEFLKYLDQFGKTKVHLSGCTYFGHPNPPAPCACPLKQAWGSLD 770
           SGAHVIEFLKYLDQFGKTKVH++GC YFGHPNPPAPC+CPLKQAWGSLD
Sbjct: 77  SGAHVIEFLKYLDQFGKTKVHITGCPYFGHPNPPAPCSCPLKQAWGSLD 125


>ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265705 [Vitis vinifera]
          Length = 231

 Score =  184 bits (467), Expect = 2e-44
 Identities = 83/89 (93%), Positives = 84/89 (94%)
 Frame = +3

Query: 504 AAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 683
           AA  S  APPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV
Sbjct: 26  AAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 85

Query: 684 HLSGCTYFGHPNPPAPCACPLKQAWGSLD 770
           H+SGC YFGHPNPPAPCACPLKQAWGSLD
Sbjct: 86  HISGCPYFGHPNPPAPCACPLKQAWGSLD 114


>emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera]
          Length = 231

 Score =  184 bits (467), Expect = 2e-44
 Identities = 83/89 (93%), Positives = 84/89 (94%)
 Frame = +3

Query: 504 AAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 683
           AA  S  APPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV
Sbjct: 26  AAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 85

Query: 684 HLSGCTYFGHPNPPAPCACPLKQAWGSLD 770
           H+SGC YFGHPNPPAPCACPLKQAWGSLD
Sbjct: 86  HISGCPYFGHPNPPAPCACPLKQAWGSLD 114


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