BLASTX nr result
ID: Coptis24_contig00001566
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00001566 (772 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|2... 189 7e-46 ref|XP_003599342.1| hypothetical protein MTR_3g031830 [Medicago ... 186 5e-45 ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|2... 185 1e-44 ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265... 184 2e-44 emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera] 184 2e-44 >ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|222850379|gb|EEE87926.1| predicted protein [Populus trichocarpa] Length = 223 Score = 189 bits (479), Expect = 7e-46 Identities = 87/109 (79%), Positives = 94/109 (86%), Gaps = 1/109 (0%) Frame = +3 Query: 447 EPRPTTDVPSSSI-VPVTTEAAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 623 EP P+ S+S +P + GSS APPSRYESQKRRDWNTFLQYLKNHKPPLTLARC Sbjct: 17 EPGPSAGSSSASASLPQQQQPEGSSPPAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 76 Query: 624 SGAHVIEFLKYLDQFGKTKVHLSGCTYFGHPNPPAPCACPLKQAWGSLD 770 SGAHVIEFLKYLDQFGKTKVH++GC YFGHPNPPAPC+CPLKQAWGSLD Sbjct: 77 SGAHVIEFLKYLDQFGKTKVHITGCPYFGHPNPPAPCSCPLKQAWGSLD 125 >ref|XP_003599342.1| hypothetical protein MTR_3g031830 [Medicago truncatula] gi|355488390|gb|AES69593.1| hypothetical protein MTR_3g031830 [Medicago truncatula] Length = 223 Score = 186 bits (472), Expect = 5e-45 Identities = 87/109 (79%), Positives = 94/109 (86%), Gaps = 4/109 (3%) Frame = +3 Query: 456 PTTDVPSSSIVP-VTTEAAGSSVA---APPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 623 P+ +PSS+ P + + GSS A APPSRYESQKRRDWNTFLQYL+NHKPPLTL RC Sbjct: 11 PSEQLPSSTTSPPIVVQPEGSSPAPPPAPPSRYESQKRRDWNTFLQYLQNHKPPLTLVRC 70 Query: 624 SGAHVIEFLKYLDQFGKTKVHLSGCTYFGHPNPPAPCACPLKQAWGSLD 770 SGAHVIEFLKYLDQFGKTKVH+SGC YFGHPNPPAPCACPLKQAWGSLD Sbjct: 71 SGAHVIEFLKYLDQFGKTKVHVSGCPYFGHPNPPAPCACPLKQAWGSLD 119 >ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|222845754|gb|EEE83301.1| predicted protein [Populus trichocarpa] Length = 228 Score = 185 bits (469), Expect = 1e-44 Identities = 86/109 (78%), Positives = 92/109 (84%), Gaps = 1/109 (0%) Frame = +3 Query: 447 EPRPTTDVP-SSSIVPVTTEAAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARC 623 EP P+ SSS + GSS APPSRYESQKRRDWNTFLQY+KNHKPPLTLARC Sbjct: 17 EPCPSAATAGSSSASQPQQQPEGSSPPAPPSRYESQKRRDWNTFLQYIKNHKPPLTLARC 76 Query: 624 SGAHVIEFLKYLDQFGKTKVHLSGCTYFGHPNPPAPCACPLKQAWGSLD 770 SGAHVIEFLKYLDQFGKTKVH++GC YFGHPNPPAPC+CPLKQAWGSLD Sbjct: 77 SGAHVIEFLKYLDQFGKTKVHITGCPYFGHPNPPAPCSCPLKQAWGSLD 125 >ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265705 [Vitis vinifera] Length = 231 Score = 184 bits (467), Expect = 2e-44 Identities = 83/89 (93%), Positives = 84/89 (94%) Frame = +3 Query: 504 AAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 683 AA S APPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV Sbjct: 26 AAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 85 Query: 684 HLSGCTYFGHPNPPAPCACPLKQAWGSLD 770 H+SGC YFGHPNPPAPCACPLKQAWGSLD Sbjct: 86 HISGCPYFGHPNPPAPCACPLKQAWGSLD 114 >emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera] Length = 231 Score = 184 bits (467), Expect = 2e-44 Identities = 83/89 (93%), Positives = 84/89 (94%) Frame = +3 Query: 504 AAGSSVAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 683 AA S APPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV Sbjct: 26 AAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKV 85 Query: 684 HLSGCTYFGHPNPPAPCACPLKQAWGSLD 770 H+SGC YFGHPNPPAPCACPLKQAWGSLD Sbjct: 86 HISGCPYFGHPNPPAPCACPLKQAWGSLD 114