BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001554
         (1593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   602   e-170
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   602   e-170
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              592   e-166
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   588   e-165
ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [...   579   e-163

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  602 bits (1553), Expect = e-170
 Identities = 287/383 (74%), Positives = 327/383 (85%), Gaps = 2/383 (0%)
 Frame = -1

Query: 1587 MKRKRGKG-DMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF 1411
            MKR+R +  +MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF
Sbjct: 1    MKRRRDEAAEMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF 60

Query: 1410 AQEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILH 1231
             +EFKGRPYDYYV+AV+ GRIQVDGEMVPVSY+V+SSQKISHF+HRHEPPV+ALD+S+L 
Sbjct: 61   TEEFKGRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQ 120

Query: 1230 KESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLIFARSA 1051
            KE +V+T+CKPASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLI ARSA
Sbjct: 121  KEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSA 180

Query: 1050 AKADLFRQQIEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHP 874
            +KAD FRQQIEAGMVQKQYIAKV GVFP  E VVN NV+YNAREGRS+ E   C G+   
Sbjct: 181  SKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPL 240

Query: 873  KGKSACTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRST 694
            KGKSACTKFTRISTNGT+SIVLCEP+TGRTHQIRVHL+Y GHPIAND LYL +    RST
Sbjct: 241  KGKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRST 300

Query: 693  VEVTAEKEAMLNSDHSTFQFPNNGQSDESEESSSKNFSTDPMCTNCPDLVPKGYGKDEEG 514
              ++A++ A  +        P +   +  +++S+ +FS DPMCTNCP+L PKGY +DEEG
Sbjct: 301  KGLSADRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEG 360

Query: 513  LWLHCARYSGPGWVYECPYPDWA 445
            LWLHC RY GP WVYECP+P+WA
Sbjct: 361  LWLHCIRYCGPDWVYECPHPEWA 383


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  602 bits (1552), Expect = e-170
 Identities = 292/388 (75%), Positives = 332/388 (85%), Gaps = 4/388 (1%)
 Frame = -1

Query: 1587 MKRKR---GKGDMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVD 1417
            MKRKR    K DMEIVWQTPANPPE+HDYIFR+G+RHVRPYYFEFISH KNRWAGKTIVD
Sbjct: 1    MKRKREEENKNDMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVD 60

Query: 1416 LFAQEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSI 1237
            LFA+EFKGRPYDYYVSAV+CGRIQVDGE VPVSY+VKSSQKISHFLHRHEPPV A D+ +
Sbjct: 61   LFAEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPV 120

Query: 1236 LHKESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLIFAR 1057
            L+K+ +VVTV KPA+VPVHPCGQYRKNTVVGILQAEH+LAPLFPVHRLDRLVSGLLI AR
Sbjct: 121  LYKDPDVVTVYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILAR 180

Query: 1056 SAAKADLFRQQIEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDI 880
            +A KADLFRQ+IEAGMVQKQY+AKV+GVFP+ E VV  N++YNAREGRS+AE      D 
Sbjct: 181  NALKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDS 240

Query: 879  HPKGKSACTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATR 700
             PKGK+ACTKFTRISTNGT+SIVLC+P+TGRTHQIRVHL+Y GHPIAND LYL +  A+R
Sbjct: 241  PPKGKTACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASR 300

Query: 699  STVEVTAEKEAMLNSDHSTFQFPNNGQSDESEESSSKNFSTDPMCTNCPDLVPKGYGKDE 520
            S   ++A++ A  +S   T   P +  SD  EE+S ++FS DPMCTNCP+L PKGY   E
Sbjct: 301  SAEGMSADRAACSSSYCVT---PQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYE 357

Query: 519  EGLWLHCARYSGPGWVYECPYPDWAVLS 436
            E LWLHC +YSGPGWVYECPYPDWA+LS
Sbjct: 358  ECLWLHCVQYSGPGWVYECPYPDWAILS 385


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  592 bits (1525), Expect = e-166
 Identities = 282/373 (75%), Positives = 319/373 (85%), Gaps = 1/373 (0%)
 Frame = -1

Query: 1560 MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFAQEFKGRPYD 1381
            MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF +EFKGRPYD
Sbjct: 1    MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60

Query: 1380 YYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHKESEVVTVCK 1201
            YYV+AV+ GRIQVDGEMVPVSY+V+SSQKISHF+HRHEPPV+ALD+S+L KE +V+T+CK
Sbjct: 61   YYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICK 120

Query: 1200 PASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLIFARSAAKADLFRQQI 1021
            PASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLI ARSA+KAD FRQQI
Sbjct: 121  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQI 180

Query: 1020 EAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHPKGKSACTKFT 844
            EAGMVQKQYIAKV GVFP  E VVN NV+YNAREGRS+     C G+   KGKSACTKFT
Sbjct: 181  EAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTV--GNCCGNTPLKGKSACTKFT 238

Query: 843  RISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTVEVTAEKEAM 664
            RISTNGT+SIVLCEP+TGRTHQIRVHL+Y GHPIAND LYL +    RST  ++A++ A 
Sbjct: 239  RISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAA 298

Query: 663  LNSDHSTFQFPNNGQSDESEESSSKNFSTDPMCTNCPDLVPKGYGKDEEGLWLHCARYSG 484
             +        P +   +  +++S+ +FS DPMCTNCP+L PKGY +DEEGLWLHC RY G
Sbjct: 299  NSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCG 358

Query: 483  PGWVYECPYPDWA 445
            P WVYECP+P+WA
Sbjct: 359  PDWVYECPHPEWA 371


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  588 bits (1517), Expect = e-165
 Identities = 284/389 (73%), Positives = 325/389 (83%), Gaps = 7/389 (1%)
 Frame = -1

Query: 1587 MKRKRGKGD------MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKT 1426
            MKRKRG+ +      MEIVWQTPANPPE+HDYIFR+G+RHVRPY+FEFISHVKNRWAGKT
Sbjct: 1    MKRKRGEKEEAAEKKMEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKT 60

Query: 1425 IVDLFAQEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALD 1246
            IVDLFA+EFKGRPYDYYVSAV+CGRIQVDGEMVPVSY+VKSSQKISHF+HRHEPPVMA D
Sbjct: 61   IVDLFAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWD 120

Query: 1245 LSILHKESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLI 1066
            + IL KE +VVTV KPA+VPVHPCGQYRKNTVVG+LQAEH LAPLFPVHRLDRLVSGLLI
Sbjct: 121  VPILDKEDDVVTVWKPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLI 180

Query: 1065 FARSAAKADLFRQQIEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCP 889
             AR+A +ADLFRQ+IEAG VQKQY+AKVIGVFP+ E +V+ NV+YNAREGRS+ E     
Sbjct: 181  LARNATRADLFRQEIEAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSC 240

Query: 888  GDIHPKGKSACTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVV 709
                 KGK+ACTKFTRI TNG +SIVLC+P+TGRTHQIRVHL+Y GHPIAND LYL + V
Sbjct: 241  DGSPIKGKTACTKFTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENV 300

Query: 708  ATRSTVEVTAEKEAMLNSDHSTFQFPNNGQSDESEESSSKNFSTDPMCTNCPDLVPKGYG 529
              RS+  V A++ A      +    P N  SD+ E+S+ ++F  DPMCTNCP+LVPKGY 
Sbjct: 301  TNRSSEGVNADRAA---HSPNNCLVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYD 357

Query: 528  KDEEGLWLHCARYSGPGWVYECPYPDWAV 442
              EEGLWLHC +YSG GWVY+CPYPDWAV
Sbjct: 358  GHEEGLWLHCVQYSGSGWVYQCPYPDWAV 386


>ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [Glycine max]
          Length = 381

 Score =  579 bits (1492), Expect = e-163
 Identities = 284/386 (73%), Positives = 323/386 (83%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1587 MKRKR-GKGDME-IVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDL 1414
            MKRKR GK  M+ IVWQTPANPP  +DY+FRNG R+VRPYYFEFI+HVKNRWAGKTIVDL
Sbjct: 1    MKRKREGKEGMDNIVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDL 60

Query: 1413 FAQEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSIL 1234
            FA+EFKGRPY+YYVSAV+CGRIQVDGEMVPVSY+VKSSQKISHFLHRHEPPVMA ++ +L
Sbjct: 61   FAEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVL 120

Query: 1233 HKESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLIFARS 1054
             K+ +V+TVCKPASVPVHPCGQYRKNTVVGILQAEH L PLFPVHRLDRLVSGLLI AR+
Sbjct: 121  QKDIDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARN 180

Query: 1053 AAKADLFRQQIEAGMVQKQYIAKVIGVFPKAEV-VNANVDYNAREGRSSAEEEKCPGDIH 877
            AAKAD+FRQQIEAG+V KQYIAKV G FP+ EV V+AN+DYNAREGRS+AE         
Sbjct: 181  AAKADIFRQQIEAGLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRG-----S 235

Query: 876  PKGKSACTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRS 697
             KGK+A TKFTRISTNGT SIVLCEP+TGRTHQIRVHL+Y+GHPIAND LY+ +    RS
Sbjct: 236  AKGKAASTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRS 295

Query: 696  TVEVTAEKEAMLNSDHSTFQFPNNGQSDESEESSSKNFSTDPMCTNCPDLVPKGYGKDEE 517
               ++A++ A ++    T  F N    +E EE+S+ +F  DPMCTNCP+L PKGY  DEE
Sbjct: 296  VKGLSADRSARISGVSLTSNF-NEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEE 354

Query: 516  GLWLHCARYSGPGWVYECPYPDWAVL 439
            GLWLHC RYSGPGW YECPYPDWA L
Sbjct: 355  GLWLHCIRYSGPGWTYECPYPDWAKL 380