BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001536
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   314   2e-83
ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot...   288   1e-75
ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot...   286   5e-75
dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]    278   2e-72
gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| T...   278   2e-72

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  314 bits (805), Expect = 2e-83
 Identities = 163/223 (73%), Positives = 192/223 (86%)
 Frame = +1

Query: 1   AGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELN 180
           +G++EG  F  ++ +   IATT  DVE +KRAWRNEKA+PEIL FQ+ LV R R QI+L 
Sbjct: 3   SGSEEGSGFPADDYES-LIATT--DVELLKRAWRNEKAAPEILHFQTALVQRSREQIQLM 59

Query: 181 ERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLS 360
           E  VEEF +NGTDPLT+SLYQMDLDR+QFLLRSYLRIRL KIEKYM +I KT D+W+RLS
Sbjct: 60  EETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSRLS 118

Query: 361 EQEQKFAKRCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSK 540
           EQEQKFAKRC DDME+HL QSVLSRLP GYQS++KQS++SEEDD+VPEP+LDTFVFCKSK
Sbjct: 119 EQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCKSK 178

Query: 541 GSLGAFQLDESGDEIVDLVADDLYVLRYKSVKPLIENGQIDVV 669
           GS+ AFQLD+S  E+VDLVADDLY+LRY SVKPLIE+GQID+V
Sbjct: 179 GSIEAFQLDDS-KEVVDLVADDLYILRYNSVKPLIESGQIDLV 220


>ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like
           [Brachypodium distachyon]
          Length = 215

 Score =  288 bits (738), Expect = 1e-75
 Identities = 141/209 (67%), Positives = 172/209 (82%)
 Frame = +1

Query: 43  DDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTDP 222
           +D + A    DVE +KRAWRNEKA+PEIL F S LV R R QI+L E  +E+F  NG D 
Sbjct: 7   EDTASAAATTDVELLKRAWRNEKAAPEILRFDSPLVSRAREQIQLLEETLEDFTDNGVDD 66

Query: 223 LTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAKRCIDDM 402
           L +SLYQMDLDR+ FLLRSYLR+RL KIEKYMI+ISK+ D+ +RLS QEQ+FAK C + M
Sbjct: 67  LVVSLYQMDLDRALFLLRSYLRLRLQKIEKYMIHISKSDDLMSRLSLQEQRFAKSCTEIM 126

Query: 403 EKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQLDESGDE 582
           EKHL QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+K  +GAFQLD+ G+E
Sbjct: 127 EKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDDIGEE 186

Query: 583 IVDLVADDLYVLRYKSVKPLIENGQIDVV 669
           IVDLVADDLYVLRYKS+K L+ENG+ID++
Sbjct: 187 IVDLVADDLYVLRYKSIKGLVENGRIDLI 215


>ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis
           vinifera]
          Length = 214

 Score =  286 bits (732), Expect = 5e-75
 Identities = 153/223 (68%), Positives = 184/223 (82%)
 Frame = +1

Query: 1   AGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELN 180
           +G++E   F  ++ +   IATT  DVE +KRAW NEKA+PEIL FQ+      R QI+L 
Sbjct: 3   SGSEEESGFPADDYES-LIATT--DVELLKRAWMNEKAAPEILHFQT------REQIQLM 53

Query: 181 ERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLS 360
           E  VEEF +NGTDPLT+SLYQM+LDR+QFLLRSYL+IRL KIEKYM +I KT D+W+ LS
Sbjct: 54  EETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRLQKIEKYMFHILKT-DVWSWLS 112

Query: 361 EQEQKFAKRCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSK 540
           EQEQKFAKRC DDME+HL QSVLSRLP GYQS++KQS++SEEDD+VPEP+LDTFVF KSK
Sbjct: 113 EQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFYKSK 172

Query: 541 GSLGAFQLDESGDEIVDLVADDLYVLRYKSVKPLIENGQIDVV 669
           GS+ AFQLD+S  E+VDLVADDLY+LRY SV PLIE+GQID+V
Sbjct: 173 GSIEAFQLDDS-KEVVDLVADDLYILRYNSVNPLIESGQIDLV 214


>dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 217

 Score =  278 bits (710), Expect = 2e-72
 Identities = 138/215 (64%), Positives = 173/215 (80%)
 Frame = +1

Query: 25  FETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFE 204
           +E E+    S A T  DVE +KRAWRNEKA+PEIL F S LV R R QI+L E  +++F 
Sbjct: 4   WEDEDSAAASAAAT-TDVELLKRAWRNEKAAPEILHFDSALVSRAREQIQLLEETLDDFT 62

Query: 205 QNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAK 384
            NG D L +SLYQMDLDR+ FLLRSYLR+RL KIEKYM +I+ + D+ +RLS+QEQ+FAK
Sbjct: 63  DNGVDDLVVSLYQMDLDRTLFLLRSYLRLRLQKIEKYMAHIANSDDLLSRLSQQEQRFAK 122

Query: 385 RCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQL 564
            C + MEKHL QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+K  +GAFQL
Sbjct: 123 SCKEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQL 182

Query: 565 DESGDEIVDLVADDLYVLRYKSVKPLIENGQIDVV 669
           D+ G+E+VDLVADDLYVLRYKS+K L+E G+ID++
Sbjct: 183 DDIGEEVVDLVADDLYVLRYKSIKGLVEAGRIDLI 217


>gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| TPA: SLD5 [Zea
           mays]
          Length = 219

 Score =  278 bits (710), Expect = 2e-72
 Identities = 136/204 (66%), Positives = 171/204 (83%)
 Frame = +1

Query: 58  ATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTDPLTISL 237
           ATT  DVE +KRAWRNEKA+PEIL F S LV R+R Q +L E  +++F  +G D L +SL
Sbjct: 18  ATT--DVELLKRAWRNEKAAPEILRFDSPLVSRVREQTQLLEETLDDFADSGVDDLVVSL 75

Query: 238 YQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAKRCIDDMEKHLT 417
           YQMDLDR+ FLLRSYLR+RL KIEKY ++IS++ D+ +RLS+QE++FAK C + MEKHL 
Sbjct: 76  YQMDLDRTLFLLRSYLRLRLQKIEKYTMHISRSEDLLSRLSQQERRFAKSCAEIMEKHLE 135

Query: 418 QSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQLDESGDEIVDLV 597
           QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+KG +GAFQLD+ G+E+VDLV
Sbjct: 136 QSVLSKLPYGYDSVSRQSLSSTEDDMVPEPQLDTFVFCKTKGDVGAFQLDDIGEEVVDLV 195

Query: 598 ADDLYVLRYKSVKPLIENGQIDVV 669
           ADDLYVLRYKSVK LIE G+ID++
Sbjct: 196 ADDLYVLRYKSVKGLIEGGRIDLI 219