BLASTX nr result

ID: Coptis24_contig00001493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001493
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305971.1| predicted protein [Populus trichocarpa] gi|1...   416   e-114
ref|XP_002312348.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111
ref|XP_003631233.1| PREDICTED: uncharacterized protein LOC100266...   400   e-109
ref|XP_002514527.1| conserved hypothetical protein [Ricinus comm...   396   e-108
ref|XP_002324384.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106

>ref|XP_002305971.1| predicted protein [Populus trichocarpa] gi|118484298|gb|ABK94028.1|
            unknown [Populus trichocarpa] gi|222848935|gb|EEE86482.1|
            predicted protein [Populus trichocarpa]
          Length = 392

 Score =  416 bits (1069), Expect = e-114
 Identities = 208/395 (52%), Positives = 275/395 (69%), Gaps = 10/395 (2%)
 Frame = -2

Query: 1178 MYVTRPLSMYRKDPSSLSEPPTEGPNSGYIVLTDEETEAEDVCCWGTCKDTGIKEVPFPQ 999
            MYVTRPLS+YR  PS+LS  P EGP++GY+V+TDEE EA++  CWG  K   +K++PFPQ
Sbjct: 1    MYVTRPLSLYRNFPSALSREPPEGPHTGYLVITDEEAEAQETYCWGIRKSRRVKKLPFPQ 60

Query: 998  NKILNVNYTTSNGENTSNDRHKLCFIPVLEQPLSSNQYYVIRAEGKYKGQACTCSKEEDM 819
            +KIL+V +++ + E       K  FIPVL+QPLSSN YYVI+A+G +KGQACTCS+E DM
Sbjct: 61   DKILSVVHSSDHEETIVK---KAWFIPVLDQPLSSNCYYVIKAKGSHKGQACTCSREMDM 117

Query: 818  STCCFCRCVKDVKPRAFDHRDIYQQVQIFKRR-YGYFAKSIAPDGFPPFFLRRKGWYVDT 642
               CF   + D+KP+ FD+R+IYQQ +I +     +F+KS+APDGFPP FLR+KGW V +
Sbjct: 118  GLWCFKSVINDIKPKPFDYRNIYQQFKIHRHHGKSFFSKSLAPDGFPPRFLRKKGWEVRS 177

Query: 641  SSSFQNQLSEAHGLNFSLRKSLPKFDFTNSNKRSTSVVVGKWYCPFVFVKEIGLVKDQMK 462
            S S++ QLSEA GL+  LR  LP FDF  S K S+ V VG+WYCPFV V+E   +++QMK
Sbjct: 178  SRSYKFQLSEALGLDVPLRSQLPSFDFPLSTKSSSRVTVGRWYCPFVLVREEPRIREQMK 237

Query: 461  SSLYYVMTLEQCWEEIFSCE--NNNKSNTISVNVNVQKEVNSLFGVEAMKDDTHARDGTV 288
             ++ Y MTLEQ W+EI+SCE  NN   +TI V+VNVQ+E++ +FG+EA +D   +  G +
Sbjct: 238  RTMLYSMTLEQYWKEIYSCENANNEAESTIMVSVNVQREMDLVFGMEATRDGGVSHGGVI 297

Query: 287  WYNNAXXXXXXXXXXXSI--AIVEKMRRMQEMGGW---RDVN--VERIEEFKGEMGWTRF 129
            WY               +  A VEKM+ +QE GGW    DVN  VER  E + E GW +F
Sbjct: 298  WYRVVSRNSSGRGFKVGVSAATVEKMKWVQEAGGWIDGGDVNETVERAVEIRSENGWRKF 357

Query: 128  GCYVLVERFALSRLDGTLLLTCDFRHNHQIQSKWE 24
            GCY LVE F L R+DG+L+L CDFRH H+I+SKWE
Sbjct: 358  GCYALVESFVLRRMDGSLVLRCDFRHTHKIKSKWE 392


>ref|XP_002312348.1| predicted protein [Populus trichocarpa] gi|222852168|gb|EEE89715.1|
            predicted protein [Populus trichocarpa]
          Length = 392

 Score =  407 bits (1046), Expect = e-111
 Identities = 211/392 (53%), Positives = 272/392 (69%), Gaps = 7/392 (1%)
 Frame = -2

Query: 1178 MYVTRPLSMYRKDPSSLSEPPTEGPNSGYIVLTDEETEAEDVCCWGTCKDTGIKEVPFPQ 999
            MYVTRPLSMY +DPS+L+ PP EGPNSG +V+ DEE      CC     D     +PFPQ
Sbjct: 1    MYVTRPLSMYLRDPSALASPPPEGPNSGVLVIQDEEA-VPTFCCGFFKSDRVSWGLPFPQ 59

Query: 998  NKILNVNYTTSNGENTSNDRHKLCFIPVLEQPLSSNQYYVIRAEGKYKGQACTCSKEEDM 819
            NK L V YT   GE+ + D +++ FIPVL QPLSSNQYYV+  +GK+KG+A   SKEEDM
Sbjct: 60   NKNLTVRYTQQAGEHQNVDTNRVLFIPVLNQPLSSNQYYVVERKGKHKGEAYINSKEEDM 119

Query: 818  STCCFCRCVKDVKPRAFDHRDIYQQVQI-FKRRYGYFAKSIAPDGFPPFFLRRKGWYVDT 642
             TCCFC C+ D+KP+  D R+IYQQ +I  ++R G+ AKS+  DGFPP FLRRKGW V T
Sbjct: 120  KTCCFCSCISDLKPQPLDPRNIYQQFEIQHRKRGGFAAKSVRADGFPPNFLRRKGWRVYT 179

Query: 641  SSSFQNQLSEAHGLNFSLRKSLPKFDFTNSNKRSTSVVVGKWYCPFVFVKEIGLVKDQMK 462
            S+S + QL+EA GLN +LR  LP F+F  S + ST VV GKWYCPF+F+KE  ++KDQMK
Sbjct: 180  STSKEFQLNEAPGLNTALRARLPDFNFPLSQRCSTPVVAGKWYCPFMFIKEGTVLKDQMK 239

Query: 461  SSLYYVMTLEQCWEEIFSCEN-NNKSNTISVNVNVQKEVNSLFGVEAMKDDTHARDGTVW 285
             S YY MTLEQ WE+IF+CEN  N+ NT++V+V V+ EV ++ G EA+ D     DG +W
Sbjct: 240  YSTYYEMTLEQQWEQIFACENMYNEGNTVTVDVAVECEVVTVGGTEAVADQKDVVDGVMW 299

Query: 284  YNNA-XXXXXXXXXXXSIAIVEKMRRMQEMGG----WRDVNVERIEEFKGEMGWTRFGCY 120
            + +              + IVE+M+ +Q +GG     R+V V+R E F G+  W +FGCY
Sbjct: 300  FRSLNRVTGSETSVGLRMEIVERMKGVQGVGGASGDEREVRVKRKEVFDGKGKWRKFGCY 359

Query: 119  VLVERFALSRLDGTLLLTCDFRHNHQIQSKWE 24
            VLVERFAL R+DG+LLLT DFRH H+I+S+WE
Sbjct: 360  VLVERFALKRMDGSLLLTYDFRHPHRIRSRWE 391


>ref|XP_003631233.1| PREDICTED: uncharacterized protein LOC100266416 [Vitis vinifera]
            gi|297737922|emb|CBI27123.3| unnamed protein product
            [Vitis vinifera]
          Length = 391

 Score =  400 bits (1029), Expect = e-109
 Identities = 203/398 (51%), Positives = 271/398 (68%), Gaps = 13/398 (3%)
 Frame = -2

Query: 1178 MYVTRPLSMYRKDPSSLSEPPTEGPNSGYIVLTDEETEAEDVCCWGTCKDTGIKEVPFPQ 999
            MYVTRPLS+YRK P +LS PP EGPNSGY++L DEE+E    CC+G CK++ I ++PFPQ
Sbjct: 1    MYVTRPLSLYRKSPEALSLPPPEGPNSGYLILQDEESET--FCCFGLCKESDIWDLPFPQ 58

Query: 998  NKILNVNYTTSNGENTSNDRHKLCFIPVLEQPLSSNQYYVIRAEGKYKGQACTCSKEEDM 819
            NK L V Y+T +GE+++    ++ FIPVL QPLS N+YY I+  G++KG A   S+E+DM
Sbjct: 59   NKNLTVRYSTGSGESSNTSHDEVFFIPVLNQPLSLNRYYAIKRHGRHKGVAHASSREDDM 118

Query: 818  STCCFCRCVKDVKPRAFDHRDIYQQVQI------FKRRYGYFAKSIAPDGFPPFFLRRKG 657
             TCCFC  VKDVKPR  D +DIYQQ +I         +  + AKSIAPDGFPP FLRR+G
Sbjct: 119  GTCCFCNVVKDVKPRPLDPQDIYQQFEISLVEGACTSKGSFTAKSIAPDGFPPNFLRREG 178

Query: 656  WYVDTSSSFQNQLSEAHGLNFSLRKSLPKFDFTNSNKRSTSVVVGKWYCPFVFVKEIGLV 477
            W + TS+    +L EA GL+ SLR  LP F+F   +K S  VVVGKWYCPF+FVKE G +
Sbjct: 179  WNLSTSTPRNFELGEAAGLDPSLRARLPDFNFPLHSKSSEPVVVGKWYCPFMFVKE-GEL 237

Query: 476  KDQMKSSLYYVMTLEQCWEEIFSCEN--NNKSNTISVNVNVQKEVNSLFGVEAMKDDTHA 303
            KDQ K S+YY MTLEQ WE+IF+CEN  N  +NT++V+V VQ EV ++   E + D+ + 
Sbjct: 238  KDQAKRSVYYEMTLEQKWEQIFACENSYNEGNNTVAVDVVVQGEVVAVAAGETVHDERNV 297

Query: 302  RDGTVWYNNAXXXXXXXXXXXSIAIVEKMRRMQEMGGW-----RDVNVERIEEFKGEMGW 138
             DG +W+ ++            + I+E+M+  Q   GW     +++ VER EE+ G  GW
Sbjct: 298  VDGVMWFRSS----SGASVGLRLEIIERMKWEQVRAGWDGEKKKEMRVERAEEYGGTGGW 353

Query: 137  TRFGCYVLVERFALSRLDGTLLLTCDFRHNHQIQSKWE 24
             +FGCYVLVE F L R+DG+L+L+  F+H HQI+ +WE
Sbjct: 354  RKFGCYVLVETFVLKRIDGSLVLSHGFKHTHQIKCRWE 391


>ref|XP_002514527.1| conserved hypothetical protein [Ricinus communis]
            gi|223546131|gb|EEF47633.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 389

 Score =  396 bits (1017), Expect = e-108
 Identities = 199/393 (50%), Positives = 272/393 (69%), Gaps = 8/393 (2%)
 Frame = -2

Query: 1178 MYVTRPLSMYRKDPSSLSEPPTEGPNSGYIVLTDEETEAEDVCCWGTCKDTGIKEVPFPQ 999
            MYVTRPLS+Y +DPS+LS  P EGPNSG +V+ DEE  AE  CC+G CK   + ++PFPQ
Sbjct: 1    MYVTRPLSLYLRDPSALSLAPPEGPNSGILVIQDEE--AEPTCCFGLCKSHQVDDLPFPQ 58

Query: 998  NKILNVNYTTSNGENTSNDRHKLCFIPVLEQPLSSNQYYVIRAEGKYKGQACTCSKEEDM 819
            NK L V Y++  G+N +   +++ FIPVL QP+SSN+YY I   GK KG+A   SKEEDM
Sbjct: 59   NKNLQVRYSSGAGQNQTVSINRVVFIPVLNQPVSSNRYYCIERRGKRKGEAHQNSKEEDM 118

Query: 818  STCCFCRCVKDVKPRAFDHRDIYQQVQIFKRRYGYF-AKSIAPDGFPPFFLRRKGWYVDT 642
            +TCCFC CV D+KP++ DH DIYQQ +I +R +G F AKS+A DGFPP FLRRKGW V T
Sbjct: 119  TTCCFCSCVSDLKPQSLDHHDIYQQFEIHRRNWGGFVAKSVASDGFPPDFLRRKGWRVHT 178

Query: 641  SSSFQNQLSEAHGLNFSLRKSLPKFDFTNSNKRSTSVVVGKWYCPFVFVKEIGLVKDQMK 462
            S++ + +L+EA GL+  LR  LP F+F  S   S+ VVVGKWYCPF+F+K+ G +KDQ+ 
Sbjct: 179  STAHEFELTEAQGLDKILRARLPDFNFPLSQNTSSPVVVGKWYCPFMFIKD-GTLKDQIG 237

Query: 461  SSLYYVMTLEQCWEEIFSCEN-NNKSNTISVNVNVQKEVNSLFGVEAMKDDTHARDGTVW 285
            +S YY MTLEQ WE+IF+CEN +N  N ++V+V V+ E  ++ G + +  + +  DG +W
Sbjct: 238  NSRYYEMTLEQQWEQIFACENSSNGGNAVNVDVIVEAEAVAV-GEKVLHTEKNVADGMMW 296

Query: 284  YNNA-XXXXXXXXXXXSIAIVEKMRRMQEMGGW-----RDVNVERIEEFKGEMGWTRFGC 123
            + +              +AI+E+M+  QE  GW       V V+R+EEF+G   W +FGC
Sbjct: 297  FRSTDNVGGETNSVGLRLAIIERMKWEQERFGWIGSNEMQVRVKRMEEFRGIGEWKKFGC 356

Query: 122  YVLVERFALSRLDGTLLLTCDFRHNHQIQSKWE 24
            Y+LVERF L R++G+L+LT DFRH   +++KWE
Sbjct: 357  YILVERFMLRRMNGSLVLTYDFRHTQHLRTKWE 389


>ref|XP_002324384.1| predicted protein [Populus trichocarpa] gi|222865818|gb|EEF02949.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  392 bits (1007), Expect = e-106
 Identities = 202/402 (50%), Positives = 273/402 (67%), Gaps = 17/402 (4%)
 Frame = -2

Query: 1178 MYVTRPLSMYRKDPSSLSEPPTEGPNSGYIVLTDEETEAEDVCCWGTCKDTGIKEVPFPQ 999
            MYVTRPLSMY+++PS+LS  P EG NSG +++ DEE +    CC+   K   +K++PFPQ
Sbjct: 1    MYVTRPLSMYKRNPSALSSAPPEGSNSGILIIQDEEVDL--TCCFCCSKIDFVKDLPFPQ 58

Query: 998  NKILNVNYTTS--------NGENTSNDRHKLCFIPVLEQPLSSNQYYVIRAEGKYKGQAC 843
            NK L V+YTT+        NG+ T+N  +++ FIPVL QPLSSN+YYVI  +GK+KG+A 
Sbjct: 59   NKNLTVSYTTTTGNNGQSNNGQTTTNSSNQVIFIPVLNQPLSSNRYYVIERQGKHKGEAH 118

Query: 842  TCSKEEDMSTCCF--CRCVKDVKPRAFDHRDIYQQVQIFK-RRYGYFAKSIAPDGFPPFF 672
            T +KEED +TCCF  CR   D +P++FD +D+Y+Q +I K  R+GY +KS+APDG PP F
Sbjct: 119  TNAKEEDETTCCFGFCRHNPDKEPQSFDPKDVYEQFEISKSNRFGYVSKSVAPDGIPPIF 178

Query: 671  LRRKGWYVDTSSSFQNQLSEAHGLNFSLRKSLPKFDFTNSNKRSTSVVVGKWYCPFVFVK 492
            LRRKGW V TS++   +L EA GL+ +LR  LP F    S + S  V VG WYCPF+F+K
Sbjct: 179  LRRKGWTVSTSTARDFELKEAAGLDRNLRARLPDFHLPLSQRSSAPVAVGNWYCPFMFIK 238

Query: 491  EIGLVKDQMKSSLYYVMTLEQCWEEIFSCE-NNNKSNTISVNVNVQKEVNSLFGVEAMKD 315
            E G +KDQM  S YY MTLEQ WE+IF+ E N+++ N++ V+  VQ+E  ++ G EA  D
Sbjct: 239  E-GKLKDQMSISRYYEMTLEQRWEQIFASEYNSSEGNSVVVDAVVQRETVAVAGREAAPD 297

Query: 314  DTHARDGTVWYNNAXXXXXXXXXXXSIAIVEKMRRMQEMGGW-----RDVNVERIEEFKG 150
              +A DG +W+ ++           S+ IV  M+  QE  GW      DV V+R+EEF G
Sbjct: 298  KRNAVDGVMWFRSSGDVGGEASVGLSLEIVGGMKWEQERAGWLGGGGSDVTVKRVEEFGG 357

Query: 149  EMGWTRFGCYVLVERFALSRLDGTLLLTCDFRHNHQIQSKWE 24
              GW +FGCYVLVERF L R+DG+L+LT DF+H HQ++SKWE
Sbjct: 358  VGGWKKFGCYVLVERFVLRRMDGSLVLTYDFKHTHQVRSKWE 399


Top