BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001486
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]         428   e-118
dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica ...   266   1e-73
ref|XP_001768919.1| predicted protein [Physcomitrella patens sub...    71   5e-10
dbj|BAJ93630.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   2e-08
ref|XP_002282369.1| PREDICTED: transcription factor bHLH95 [Viti...    64   4e-08

>dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]
          Length = 228

 Score =  428 bits (1101), Expect = e-118
 Identities = 221/228 (96%), Positives = 222/228 (97%)
 Frame = +3

Query: 105 MPIENPNDWETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHDLLPHGNTVRKE 284
           MPIE  NDWETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLH LLPHGNTVRKE
Sbjct: 1   MPIETLNDWETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKE 60

Query: 285 QSSILDEIIKYIPLASARLKSLQNRKESTPLSARPKLASPSILVSDRKSAGSSNSTDCDI 464
           QSSILDEIIKYIPLASARLKSLQNRKESTPLS RPKLASPSI VSDRKS+GSSNSTDCDI
Sbjct: 61  QSSILDEIIKYIPLASARLKSLQNRKESTPLSTRPKLASPSIQVSDRKSSGSSNSTDCDI 120

Query: 465 RVAPEPSASVAIRVRGDRVNVSLTDTKGAAQTLLLSAIFDELDAHNLELVRSTHCRDGSK 644
           RVAPEPSASVAIRVRGDRVNVSLTDTKG AQTLLLSAIFDELDAHNLELVRSTHCRDGSK
Sbjct: 121 RVAPEPSASVAIRVRGDRVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSK 180

Query: 645 VLHHSESKISDGLERSPGLLKTRLQELAGRLHKLRKSSSHKRTFDQLD 788
           VLHHSESKISDGLERSPGLLKTRLQELAGRLHKLRKSSSHKRTFDQLD
Sbjct: 181 VLHHSESKISDGLERSPGLLKTRLQELAGRLHKLRKSSSHKRTFDQLD 228


>dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica var. dissecta]
          Length = 206

 Score =  266 bits (679), Expect(2) = 1e-73
 Identities = 138/147 (93%), Positives = 140/147 (95%)
 Frame = +3

Query: 105 MPIENPNDWETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHDLLPHGNTVRKE 284
           MPIE  NDWETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLH LLPHGNTVRKE
Sbjct: 26  MPIETLNDWETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKE 85

Query: 285 QSSILDEIIKYIPLASARLKSLQNRKESTPLSARPKLASPSILVSDRKSAGSSNSTDCDI 464
           QSSILDEIIKYIPLASARLKSLQNRKESTPLS RPKLASPSI VSDRKS+GSSNST CDI
Sbjct: 86  QSSILDEIIKYIPLASARLKSLQNRKESTPLSTRPKLASPSIQVSDRKSSGSSNSTXCDI 145

Query: 465 RVAPEPSASVAIRVRGDRVNVSLTDTK 545
           RVAPEPSASVAIRVRGDRV VSLTDT+
Sbjct: 146 RVAPEPSASVAIRVRGDRVXVSLTDTR 172



 Score = 38.1 bits (87), Expect(2) = 1e-73
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 35  SASSVAIFSVNIE*NNSIERKIQD 106
           SASSVAIFS++IE NNSI RKIQ+
Sbjct: 1   SASSVAIFSISIEXNNSIXRKIQE 24


>ref|XP_001768919.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679831|gb|EDQ66273.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 532

 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
 Frame = +3

Query: 114 ENPNDWETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHDLLPHGNTVRKEQSS 293
           E  N      S+G S   P+  RE H  +ERERRK M  LF  L +LLPH  T + ++S+
Sbjct: 243 EKTNQLGVKKSKG-SGKRPVSQRENHIWSERERRKGMNCLFTRLRNLLPH-PTSKTDKST 300

Query: 294 ILDEIIKYIPLASARLKSLQNRKESTPLSARPKLASPSILVSDRKSAGSSNSTDCD---- 461
           ++ EIIKYI     +L+ L  +++    +    LA P + VS+       + ++ D    
Sbjct: 301 VIGEIIKYIQSLQVKLEMLTKKRQQVMAAV---LARPGMFVSNNSGLTLVDHSNFDPSSM 357

Query: 462 --IRVAPEP----------SASVAIRVRGDRVNVSLTDTKGAAQTLLLSAIFDELDAHNL 605
             I   P P            +V + V G  +NV +T +    +  LL  +   +  H L
Sbjct: 358 TAITALPPPGKESCLQSYLGTNVGLHVCG--LNVFITTSSPRGRQGLLQQLLVTIHKHQL 415

Query: 606 ELVRSTHCRDGSKVLHHSESKISDGLERSPGLLKTRLQEL 725
           +++ +T     + V H    + S   E     L + LQ +
Sbjct: 416 DVINATISTSSTSVFHCLHCQASQNAEVLNNDLHSALQSI 455


>dbj|BAJ93630.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 253

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
 Frame = +3

Query: 141 SSEGKSSGAPIDARE-RHKLAERERRKSMRELFLSLHDLLPHGNTVRK-EQSSILDEIIK 314
           +S G  SG P   ++  H   ER+RRK + EL+LSL  LLP  +  +K    + +   +K
Sbjct: 62  ASSGSGSGGPGSHKKLSHNAYERDRRKQLNELYLSLRSLLPDADHTKKLSIPTTVCRALK 121

Query: 315 YIPLASARLKSLQNRKESTPLSARPKLASPSILVSDRKSAGSSNSTDCDIRVAPEPSASV 494
           YIP    ++++L+ +KE        KLAS +        +GS         +AP  SA+ 
Sbjct: 122 YIPELQKQVENLEKKKE--------KLASANCKPGVLSVSGS---------IAPTVSAT- 163

Query: 495 AIRVRGDRVNVSLTDTKGAAQTLLLSAIFDELDAHNLELV-RSTHCRDGSKVLHHSESKI 671
            +  +   V +S++  K AA TL LS   + L+   L+L+  ST    G+K+ ++     
Sbjct: 164 CLNDKEIMVQISMSRDKDAATTLPLSKCINVLENEGLQLISSSTSSTFGNKMFYNLH--- 220

Query: 672 SDGLERSPGLLKTRLQELAGRLHK-LRKSS 758
              L+RS G L         +L + +RK++
Sbjct: 221 ---LQRSQGALNMECPSFCDKLEQAIRKTA 247


>ref|XP_002282369.1| PREDICTED: transcription factor bHLH95 [Vitis vinifera]
           gi|147766738|emb|CAN74162.1| hypothetical protein
           VITISV_026442 [Vitis vinifera]
           gi|297741258|emb|CBI32389.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
 Frame = +3

Query: 144 SEGKSSGAP--IDARERHKLAERERRKSMRELFLSLHDLLPHGNTVRKEQSSILDEIIKY 317
           +EGKS G        E H   ERERRK MR +F SLH LLP     + ++S+I+DE + Y
Sbjct: 78  NEGKSGGGGGGESDHEIHIWTERERRKKMRNMFSSLHALLPQ-LPPKADKSTIVDEAVNY 136

Query: 318 IPLASARLKSLQNRK-----ESTPLSARPKLASPSILVSDRKSA-----GSS-------N 446
           I      L+ LQ +K      +T ++  P + +   L  D + A     GSS       +
Sbjct: 137 IKTLQHTLQKLQKQKLERLQGATTVNYEPSIITSQKLAFDSREAFLADQGSSSNLAITPS 196

Query: 447 STDCDIRVAPEP-------SASVAIRVRGDRVNVSLTDTKGAAQTLLLSAIFDELDAHNL 605
           ++   + VA  P       S +V + V G+   +S+   K      LL+ I   L+ H L
Sbjct: 197 NSSNSLSVARVPAVFQSWTSPNVTLNVCGNEAQISVCSPKKPG---LLTTICYVLEKHKL 253

Query: 606 ELVRSTHCRDGSKVLHHSESKISDGLERSP 695
           E++ +    D ++ ++  ++  +  L++ P
Sbjct: 254 EVISAHVSSDYNRSMYMIQTNANGALDQFP 283