BLASTX nr result

ID: Coptis24_contig00001477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001477
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300813.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
dbj|BAH10641.1| 2-methyl-6-phytylbenzoquinone methyltranferase [...   547   e-153
ref|XP_002307615.1| predicted protein [Populus trichocarpa] gi|2...   544   e-152
ref|XP_002520956.1| chloroplast inner envelope protein, putative...   543   e-152
ref|XP_002281313.1| PREDICTED: 37 kDa inner envelope membrane pr...   540   e-151

>ref|XP_002300813.1| predicted protein [Populus trichocarpa] gi|222842539|gb|EEE80086.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  551 bits (1421), Expect = e-154
 Identities = 270/341 (79%), Positives = 288/341 (84%)
 Frame = +2

Query: 173  MASSMLNGAESVTLIRXXXXXXXXXXXXXXXXXXXXKMGSVSFNRYSKGRTLVTKCXXXX 352
            MASSMLNGAE++TLIR                    K+ +V+  R SK RTL   C    
Sbjct: 1    MASSMLNGAENLTLIRGITPKGLGFGGSDLQGRHFSKVNAVASTRISKARTLTPMCSLSA 60

Query: 353  XXRPASQPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMIVVD 532
              RPASQPRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPADL++RNM+VVD
Sbjct: 61   S-RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLSNRNMLVVD 119

Query: 533  VXXXXXXXXXXIVKHVDAKNVTILDQSPHQLAKAREKAPLKDCKIIEGDAEDLPFPTDYA 712
            V          IVKHVDAKNVTILDQSPHQLAKA++K PLKDCKIIEGDAEDLPF TDYA
Sbjct: 120  VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIIEGDAEDLPFRTDYA 179

Query: 713  DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEE 892
            DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEE
Sbjct: 180  DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEE 239

Query: 893  YIEWFKKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKLGPKVEDVRK 1072
            YIEWF+KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL+LGPK EDV +
Sbjct: 240  YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKAEDVTE 299

Query: 1073 PVNPMVFLLRLILGALAGTYYVLVPIYMWIKDLIVPKGMPI 1195
            PV P VFL+RLILGA+A TYYVLVPIYMW+KD IVPKG PI
Sbjct: 300  PVKPFVFLMRLILGAMAATYYVLVPIYMWLKDQIVPKGRPI 340


>dbj|BAH10641.1| 2-methyl-6-phytylbenzoquinone methyltranferase [Hevea brasiliensis]
          Length = 340

 Score =  547 bits (1409), Expect = e-153
 Identities = 266/341 (78%), Positives = 285/341 (83%)
 Frame = +2

Query: 173  MASSMLNGAESVTLIRXXXXXXXXXXXXXXXXXXXXKMGSVSFNRYSKGRTLVTKCXXXX 352
            MAS MLNGAE+ TL+                     ++  +S +R S+ RT++ KC    
Sbjct: 1    MASLMLNGAENFTLMSGITPKGLGFLGSDFHGNHFPRVNLISSSRISRTRTVMPKCNLSA 60

Query: 353  XXRPASQPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMIVVD 532
              RPASQPRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLN+RN++VVD
Sbjct: 61   S-RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNNRNLLVVD 119

Query: 533  VXXXXXXXXXXIVKHVDAKNVTILDQSPHQLAKAREKAPLKDCKIIEGDAEDLPFPTDYA 712
            V          IVKHVDA+NVTILDQSPHQLAKA++K PLKDCKIIEGDAEDLPFPTDYA
Sbjct: 120  VGGGTGFTTLGIVKHVDAQNVTILDQSPHQLAKAKQKEPLKDCKIIEGDAEDLPFPTDYA 179

Query: 713  DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEE 892
            DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFAD WMLFPKEEE
Sbjct: 180  DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLFPKEEE 239

Query: 893  YIEWFKKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKLGPKVEDVRK 1072
            YIEWF+KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKLGPK ED+ K
Sbjct: 240  YIEWFEKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKLGPKEEDIAK 299

Query: 1073 PVNPMVFLLRLILGALAGTYYVLVPIYMWIKDLIVPKGMPI 1195
            PVNP VFLLR ILG LA  YYVLVPIYMW+KD IVPKG PI
Sbjct: 300  PVNPFVFLLRFILGGLAAAYYVLVPIYMWLKDQIVPKGRPI 340


>ref|XP_002307615.1| predicted protein [Populus trichocarpa] gi|222857064|gb|EEE94611.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  544 bits (1401), Expect = e-152
 Identities = 265/341 (77%), Positives = 281/341 (82%)
 Frame = +2

Query: 173  MASSMLNGAESVTLIRXXXXXXXXXXXXXXXXXXXXKMGSVSFNRYSKGRTLVTKCXXXX 352
            M SS+ NGAE++ LIR                    K+  +S  R SK RTL  KC    
Sbjct: 1    MTSSVFNGAENLALIRGITPKGLGFLGSDLQGRHFSKVSLISSTRISKARTLTPKCSLSA 60

Query: 353  XXRPASQPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMIVVD 532
              RPASQPRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPADL+DRN IVVD
Sbjct: 61   P-RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLSDRNTIVVD 119

Query: 533  VXXXXXXXXXXIVKHVDAKNVTILDQSPHQLAKAREKAPLKDCKIIEGDAEDLPFPTDYA 712
            V          IVKHVDAKNVTILDQSPHQLAKA++K PLKDCKI+EGDAEDLPFPTDYA
Sbjct: 120  VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIVEGDAEDLPFPTDYA 179

Query: 713  DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEE 892
            DRYVSAGSIEYWPDPQRGIKEAYRVLKL GKACLIGPV+PTFWLSRFFAD WMLFPKEEE
Sbjct: 180  DRYVSAGSIEYWPDPQRGIKEAYRVLKLEGKACLIGPVHPTFWLSRFFADVWMLFPKEEE 239

Query: 893  YIEWFKKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKLGPKVEDVRK 1072
            YIEWF+KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL+LGPK EDV K
Sbjct: 240  YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKAEDVSK 299

Query: 1073 PVNPMVFLLRLILGALAGTYYVLVPIYMWIKDLIVPKGMPI 1195
            P NP VF LR ILGA+A TYYVLVPIYMW+KD IVPKG PI
Sbjct: 300  PANPFVFFLRFILGAMAATYYVLVPIYMWLKDQIVPKGRPI 340


>ref|XP_002520956.1| chloroplast inner envelope protein, putative [Ricinus communis]
            gi|223539793|gb|EEF41373.1| chloroplast inner envelope
            protein, putative [Ricinus communis]
          Length = 342

 Score =  543 bits (1398), Expect = e-152
 Identities = 267/343 (77%), Positives = 285/343 (83%), Gaps = 2/343 (0%)
 Frame = +2

Query: 173  MASSMLNGAESVTLIRXXXXXXXXXXXXXXXXXXXX--KMGSVSFNRYSKGRTLVTKCXX 346
            MASSMLNGAE++TL+R                      ++   S +R  K  T+  KC  
Sbjct: 1    MASSMLNGAENLTLMRIKSTNHKGLSFSGSDFNGKHFPRVNLTSSSRILKTTTIAPKCSL 60

Query: 347  XXXXRPASQPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMIV 526
                RPASQPRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL+DRNM+V
Sbjct: 61   SAS-RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSDRNMLV 119

Query: 527  VDVXXXXXXXXXXIVKHVDAKNVTILDQSPHQLAKAREKAPLKDCKIIEGDAEDLPFPTD 706
            VDV          IVKHVDAKNVTILDQSPHQLAKA++K PLK+CKIIEGDAEDLPFPTD
Sbjct: 120  VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTD 179

Query: 707  YADRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKE 886
            YADRYVSAGSIEYWPDPQRGI+EAYRVLKLGGKACLIGPVYPTFWLSRFFAD WMLFPKE
Sbjct: 180  YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLFPKE 239

Query: 887  EEYIEWFKKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKLGPKVEDV 1066
            EEYIEWF+KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL+LGPK EDV
Sbjct: 240  EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKEEDV 299

Query: 1067 RKPVNPMVFLLRLILGALAGTYYVLVPIYMWIKDLIVPKGMPI 1195
             KPVNP VF LR ILGA+A TYYVLVPIYMW+KD IVPKG PI
Sbjct: 300  SKPVNPFVFFLRFILGAMAATYYVLVPIYMWLKDQIVPKGRPI 342


>ref|XP_002281313.1| PREDICTED: 37 kDa inner envelope membrane protein, chloroplastic
            [Vitis vinifera]
          Length = 340

 Score =  540 bits (1390), Expect = e-151
 Identities = 261/341 (76%), Positives = 284/341 (83%)
 Frame = +2

Query: 173  MASSMLNGAESVTLIRXXXXXXXXXXXXXXXXXXXXKMGSVSFNRYSKGRTLVTKCXXXX 352
            MASSML GAE++ LIR                    K+G VS++R  + +TL  +C    
Sbjct: 1    MASSMLTGAENLKLIRGISPNGLGFLGSDVHGKHFPKLGLVSWSRNYRLKTLKARCNASV 60

Query: 353  XXRPASQPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMIVVD 532
              RPASQ RFIQHK+EAFWFYRFLSIVYDH+INPGHWTEDMRDDALEPADLNDRN++VVD
Sbjct: 61   S-RPASQLRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLNDRNLVVVD 119

Query: 533  VXXXXXXXXXXIVKHVDAKNVTILDQSPHQLAKAREKAPLKDCKIIEGDAEDLPFPTDYA 712
            V          IVKHVDAKNVT+LDQSPHQLAKA++K PLKDC+IIEGDAEDLPFPTDYA
Sbjct: 120  VGGGTGFTTLGIVKHVDAKNVTLLDQSPHQLAKAKKKEPLKDCRIIEGDAEDLPFPTDYA 179

Query: 713  DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEE 892
            DRYVSAGSIEYWP+PQRGIKEAYRVLK GGKAC+IGPVYPTFWLSRFFAD WMLFPKEEE
Sbjct: 180  DRYVSAGSIEYWPEPQRGIKEAYRVLKQGGKACMIGPVYPTFWLSRFFADVWMLFPKEEE 239

Query: 893  YIEWFKKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKLGPKVEDVRK 1072
            YIEWF+KAGF DVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL+LGPK EDV K
Sbjct: 240  YIEWFEKAGFTDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKAEDVSK 299

Query: 1073 PVNPMVFLLRLILGALAGTYYVLVPIYMWIKDLIVPKGMPI 1195
            P NP VF LR ILGALAGTYYVLVPIYMW+KD +VP+G PI
Sbjct: 300  PTNPFVFFLRFILGALAGTYYVLVPIYMWLKDQLVPEGQPI 340


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