BLASTX nr result
ID: Coptis24_contig00001474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001474
(1383 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ93975.1| predicted protein [Hordeum vulgare subsp. vulgar... 296 1e-77
ref|NP_001049283.1| Os03g0199100 [Oryza sativa Japonica Group] g... 295 2e-77
ref|XP_003558574.1| PREDICTED: UPF0496 protein 1-like isoform 1 ... 292 2e-76
ref|XP_002468329.1| hypothetical protein SORBIDRAFT_01g043880 [S... 290 6e-76
tpg|DAA43952.1| TPA: hypothetical protein ZEAMMB73_791340 [Zea m... 289 1e-75
>dbj|BAJ93975.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526341|dbj|BAJ97187.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 383
Score = 296 bits (757), Expect = 1e-77
Identities = 163/390 (41%), Positives = 257/390 (65%), Gaps = 12/390 (3%)
Frame = +1
Query: 142 MGNQWSNTGTSA------VSPREQLSHAQLSTEELLTYQDACQTDQDVRKFDSELQSRTT 303
MGN S++ + S L HA + E+L +Y+ AC+ D +VR FDS LQ RT+
Sbjct: 1 MGNNSSSSAGGSRPHRPTTSSEPGLPHAA-AAEDLSSYEAACRHDPEVRTFDSTLQRRTS 59
Query: 304 RAINALVADVHKPNSCSLDLLKEVTGCMVETDQQVVGIILASKKDVWKNPELFSLVEDYY 483
RAI+ L V + S SLD L+EVTGC+++ +Q+VV +IL KKD+WK+PELF LVEDY+
Sbjct: 60 RAISTLAVGV-EVRSMSLDSLREVTGCLLDMNQEVVKVILDCKKDIWKSPELFDLVEDYF 118
Query: 484 QTSLHTMEFCNSLEKFLTEAKYKQIILRTALRRLSEAVPGEDD------YNKAIEDLGWF 645
++SLHT++FC +L+K L A+ Q++L AL+R + + D Y + + +L F
Sbjct: 119 ESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEDDNDGDAAPAARYARTLHELRQF 178
Query: 646 RSSEVNFTEELLKSFEIVYCEHLQMLQRLQAQRIQLDKKMKRVKSLKKTANIIFAATVVT 825
+++ FT+E ++F+ VY + L ML++LQ ++ +LDKK+K +K+ ++ +++IFA+T
Sbjct: 179 KAAGDPFTDEFFEAFQAVYRQQLAMLEKLQQRKHRLDKKIKTIKAWRRVSSVIFASTFAA 238
Query: 826 VLVCSIVASAITAPHLVTAMVAALGAAVSVIPTENWFKRLFKGFEDAVQEQREIVSSMQA 1005
VL+CS+VA+AI AP + A+ AA AA+ + W L KG++DAV+ Q+E+VS+MQ
Sbjct: 239 VLICSVVAAAIAAPPVAAALAAA--AAIPIGSMGKWIDSLLKGYQDAVRGQKEVVSAMQV 296
Query: 1006 GTCIAIRDLDIIRVLVEGLEIEMADFLRQIDDNLALGKDSDILLVIKDIENKVDIFTKNV 1185
GT IAI+DLD IRVL+ +E+E++ + +D A + + +++I+ K++ F K+V
Sbjct: 297 GTFIAIKDLDNIRVLISRVEMEISSMIDCVD--FAERDEEAVKFGVEEIKKKLEAFMKSV 354
Query: 1186 DELGECVDGYSRNIRQARAVVQRRIINVPN 1275
++LGE D SR+IR+AR VV +RII PN
Sbjct: 355 EDLGEQADRCSRDIRRARTVVLQRIIR-PN 383
>ref|NP_001049283.1| Os03g0199100 [Oryza sativa Japonica Group]
gi|122247414|sp|Q10QE9.1|U496A_ORYSJ RecName:
Full=UPF0496 protein 1
gi|158706402|sp|A2XDK8.1|U496A_ORYSI RecName:
Full=UPF0496 protein 1 gi|108706685|gb|ABF94480.1|
expressed protein [Oryza sativa Japonica Group]
gi|113547754|dbj|BAF11197.1| Os03g0199100 [Oryza sativa
Japonica Group] gi|125542779|gb|EAY88918.1| hypothetical
protein OsI_10402 [Oryza sativa Indica Group]
gi|125585279|gb|EAZ25943.1| hypothetical protein
OsJ_09795 [Oryza sativa Japonica Group]
Length = 388
Score = 295 bits (755), Expect = 2e-77
Identities = 161/394 (40%), Positives = 260/394 (65%), Gaps = 16/394 (4%)
Frame = +1
Query: 142 MGNQWSNTGTSA----VSPREQLSHAQLSTEELLTYQDACQTDQDVRKFDSELQSRTTRA 309
MGN S++G+ S L A + EEL +Y+ AC++D ++R FD+ LQ RT+RA
Sbjct: 1 MGNS-SSSGSHRPPRPASSESALPPAAAAAEELSSYEAACRSDPELRTFDTTLQRRTSRA 59
Query: 310 INALVADVHKPNSCSLDLLKEVTGCMVETDQQVVGIILASKKDVWKNPELFSLVEDYYQT 489
I+ L V + S SL+ L+EVTGC+++ +Q+VV +IL KKD+WK+PELF LVEDY+++
Sbjct: 60 ISTLAVGV-EVRSLSLESLREVTGCLLDMNQEVVRVILDCKKDIWKSPELFDLVEDYFES 118
Query: 490 SLHTMEFCNSLEKFLTEAKYKQIILRTALRRLSE------AVPGEDD------YNKAIED 633
SLHT++FC +L+K L A+ Q++L AL+R + A G++D Y + + +
Sbjct: 119 SLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEEDNDAAAAGQEDAAPSARYARTLHE 178
Query: 634 LGWFRSSEVNFTEELLKSFEIVYCEHLQMLQRLQAQRIQLDKKMKRVKSLKKTANIIFAA 813
L F+++ FTEE +F+ VY + L ML++LQ ++ +LDKK++ +K+ ++ ++IIFA
Sbjct: 179 LRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQRKHRLDKKVRAIKAWRRVSSIIFAT 238
Query: 814 TVVTVLVCSIVASAITAPHLVTAMVAALGAAVSVIPTENWFKRLFKGFEDAVQEQREIVS 993
T VL+CS+VA+AI AP + A+ AA A++ V W L KG++DA++ Q+E+VS
Sbjct: 239 TFAAVLICSVVAAAIAAPPVAAALAAA--ASIPVGSMGKWIDSLLKGYQDALRGQKEVVS 296
Query: 994 SMQAGTCIAIRDLDIIRVLVEGLEIEMADFLRQIDDNLALGKDSDILLVIKDIENKVDIF 1173
+MQ GT IAI+DLD IRVL+ +E+E++ + ++ A + + +++I+ K+++F
Sbjct: 297 AMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVE--FAERDEEAVKFGVEEIKKKLEVF 354
Query: 1174 TKNVDELGECVDGYSRNIRQARAVVQRRIINVPN 1275
K+V++LGE D SR+IR+AR VV +RII P+
Sbjct: 355 MKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS 388
>ref|XP_003558574.1| PREDICTED: UPF0496 protein 1-like isoform 1 [Brachypodium distachyon]
gi|357113569|ref|XP_003558575.1| PREDICTED: UPF0496
protein 1-like isoform 2 [Brachypodium distachyon]
Length = 393
Score = 292 bits (747), Expect = 2e-76
Identities = 165/399 (41%), Positives = 253/399 (63%), Gaps = 21/399 (5%)
Frame = +1
Query: 142 MGNQWSNTGTSAVSPREQ------LSHAQLSTEELLTYQDACQTDQDVRKFDSELQSRTT 303
MGN S+ G P L HA + EEL +Y+ AC+ D +VR FDS LQ RT+
Sbjct: 1 MGNNSSSGGGGGHKPHRPSSSDSGLPHAT-AAEELSSYEAACRYDPEVRTFDSTLQRRTS 59
Query: 304 RAINALVADVHKPNSCSLDLLKEVTGCMVETDQQVVGIILASKKDVWKNPELFSLVEDYY 483
RAI+ L V + S SLD L+EVTGC+++ +Q+VV +IL KKD+WK+P+LF LVEDY+
Sbjct: 60 RAISTLAVGV-EVRSMSLDSLREVTGCLLDMNQEVVRVILDCKKDIWKSPDLFDLVEDYF 118
Query: 484 QTSLHTMEFCNSLEKFLTEAKYKQIILRTALRRLSEAVPGEDD---------------YN 618
++SL T++FC +L+K L A+ Q++L AL+R + G+ Y
Sbjct: 119 ESSLQTLDFCTALDKCLKRARDSQLLLHVALQRFDDEERGDAPEGASASAAAAAPSARYA 178
Query: 619 KAIEDLGWFRSSEVNFTEELLKSFEIVYCEHLQMLQRLQAQRIQLDKKMKRVKSLKKTAN 798
+ + +L F+++ FT+E ++F+ VY + L ML++LQ ++ +LDKK+K +K+ ++ ++
Sbjct: 179 RTLHELRQFKAAGDPFTDEFFEAFQAVYRQQLAMLEKLQQRKHRLDKKVKTIKAWRRVSS 238
Query: 799 IIFAATVVTVLVCSIVASAITAPHLVTAMVAALGAAVSVIPTENWFKRLFKGFEDAVQEQ 978
IIFA T VL+CS+VA+AI AP + A+ AA AAV V W L KG++DA+ Q
Sbjct: 239 IIFATTFAAVLICSVVAAAIAAPPVAAALAAA--AAVPVGSMGKWIDSLLKGYQDALHGQ 296
Query: 979 REIVSSMQAGTCIAIRDLDIIRVLVEGLEIEMADFLRQIDDNLALGKDSDILLVIKDIEN 1158
+E+VS+MQ GT IAI+DLD IRVL+ +E+E++ + ++ A + I +++I+
Sbjct: 297 KEVVSAMQVGTFIAIKDLDSIRVLINRVEMEISSMVDCVE--FAERDEEAIKFGVEEIKK 354
Query: 1159 KVDIFTKNVDELGECVDGYSRNIRQARAVVQRRIINVPN 1275
K++ F K+V++LGE D SR+IR+AR VV +RII PN
Sbjct: 355 KLEAFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPN 393
>ref|XP_002468329.1| hypothetical protein SORBIDRAFT_01g043880 [Sorghum bicolor]
gi|241922183|gb|EER95327.1| hypothetical protein
SORBIDRAFT_01g043880 [Sorghum bicolor]
Length = 381
Score = 290 bits (742), Expect = 6e-76
Identities = 162/387 (41%), Positives = 253/387 (65%), Gaps = 9/387 (2%)
Frame = +1
Query: 142 MGNQWSNTGTSAVSPREQLS----HAQLSTEELLTYQDACQTDQDVRKFDSELQSRTTRA 309
MGN S+ G+S P S A EEL +Y+ AC++D ++R FD+ LQ RT+RA
Sbjct: 1 MGNSSSSGGSSNRRPGHSESALPPEAAAPAEELSSYEAACRSDPELRTFDTTLQRRTSRA 60
Query: 310 INALVADVHKPNSCSLDLLKEVTGCMVETDQQVVGIILASKKDVWKNPELFSLVEDYYQT 489
I+ L V + S SLD L+EVTGC+++ +Q+VV +IL KKD+WK+ ELF LVEDY+++
Sbjct: 61 ISTLAVGV-EVRSMSLDSLREVTGCLLDMNQEVVRVILDCKKDIWKSAELFDLVEDYFES 119
Query: 490 SLHTMEFCNSLEKFLTEAKYKQIILRTALRRL-----SEAVPGEDDYNKAIEDLGWFRSS 654
SL T++FC +L+K L A+ Q++L AL+R S+A P Y + + +L F+++
Sbjct: 120 SLQTLDFCTALDKCLKRARDSQLLLHVALQRFDDEQNSDAAPSA-RYARTLHELRQFKAA 178
Query: 655 EVNFTEELLKSFEIVYCEHLQMLQRLQAQRIQLDKKMKRVKSLKKTANIIFAATVVTVLV 834
FT+E +F+ VY + L ML++LQ ++ +LD+K+K +K+ ++ ++IIFA T VL+
Sbjct: 179 GDPFTDEFFAAFQAVYRQQLAMLEKLQQRKHRLDRKIKTIKAWRRVSSIIFATTFAAVLI 238
Query: 835 CSIVASAITAPHLVTAMVAALGAAVSVIPTENWFKRLFKGFEDAVQEQREIVSSMQAGTC 1014
CS+VA+AI AP + A+ AA AAV + W L KG++DA++ Q+E+VS+MQ GT
Sbjct: 239 CSVVAAAIAAPPVAAALAAA--AAVPLGSMGKWIDSLLKGYQDALRGQKEVVSTMQVGTF 296
Query: 1015 IAIRDLDIIRVLVEGLEIEMADFLRQIDDNLALGKDSDILLVIKDIENKVDIFTKNVDEL 1194
IAI+DLD IRVL+ +E E++ + ++ A + + +++I+ K++ F K+V++L
Sbjct: 297 IAIKDLDSIRVLINRVEAEVSSMVDCVE--FAERDEEAVKFGVEEIKKKLENFMKSVEDL 354
Query: 1195 GECVDGYSRNIRQARAVVQRRIINVPN 1275
GE D SR+IR+AR VV +RII PN
Sbjct: 355 GEQADRCSRDIRRARTVVLQRIIRQPN 381
>tpg|DAA43952.1| TPA: hypothetical protein ZEAMMB73_791340 [Zea mays]
Length = 382
Score = 289 bits (739), Expect = 1e-75
Identities = 158/384 (41%), Positives = 249/384 (64%), Gaps = 7/384 (1%)
Frame = +1
Query: 145 GNQWSNTGTSAVSPREQLSHAQLSTEELLTYQDACQTDQDVRKFDSELQSRTTRAINALV 324
GN+ SA+ P EEL +Y+ AC++D ++R FD+ LQ RT+RAI+ L
Sbjct: 10 GNRRPEHSESALPPEAS------PAEELSSYEAACRSDPELRTFDTTLQRRTSRAISTLA 63
Query: 325 ADVHKPNSCSLDLLKEVTGCMVETDQQVVGIILASKKDVWKNPELFSLVEDYYQTSLHTM 504
V + S SLD L+EVTGC+++ +Q+VV +IL KKD+WK+PELF LVEDY+++SL T+
Sbjct: 64 VGV-EVRSMSLDSLREVTGCLLDMNQEVVRVILDCKKDIWKSPELFDLVEDYFESSLQTL 122
Query: 505 EFCNSLEKFLTEAKYKQIILRTALRRLSE-------AVPGEDDYNKAIEDLGWFRSSEVN 663
+FC +L+K L A+ Q++L AL+R + A Y + + +L F+++
Sbjct: 123 DFCTALDKCLKRARDSQLLLHVALQRFDDEEGSDAAAAAPSARYARTLHELRQFKAAGDP 182
Query: 664 FTEELLKSFEIVYCEHLQMLQRLQAQRIQLDKKMKRVKSLKKTANIIFAATVVTVLVCSI 843
FT+E +F+ VY + L ML++LQ ++ +LDKK+K +K+ ++ ++IIFA T VL+CS+
Sbjct: 183 FTDEFFAAFQAVYRQQLAMLEKLQQRKHRLDKKVKTIKAWRRVSSIIFATTFAAVLICSV 242
Query: 844 VASAITAPHLVTAMVAALGAAVSVIPTENWFKRLFKGFEDAVQEQREIVSSMQAGTCIAI 1023
VA+AI AP + A+ AA AAV + W L KG++DA++ Q+E+VS+MQ GT IAI
Sbjct: 243 VAAAIAAPPVAAALAAA--AAVPLGSMGKWIDSLLKGYQDALRGQKEVVSAMQVGTFIAI 300
Query: 1024 RDLDIIRVLVEGLEIEMADFLRQIDDNLALGKDSDILLVIKDIENKVDIFTKNVDELGEC 1203
+DLD IRVL+ +E+E++ + ++ A + + +++I+ K++ F K+V++LGE
Sbjct: 301 KDLDSIRVLINRVEVEISSMVDCVE--FAERDEEAVKFGVEEIKKKLENFMKSVEDLGEQ 358
Query: 1204 VDGYSRNIRQARAVVQRRIINVPN 1275
D SR+IR+AR VV +RII PN
Sbjct: 359 ADRCSRDIRRARTVVLQRIIRHPN 382