BLASTX nr result

ID: Coptis24_contig00001468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001468
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267609.1| PREDICTED: remorin [Vitis vinifera] gi|14784...   172   1e-40
ref|XP_002510796.1| Remorin, putative [Ricinus communis] gi|2235...   164   3e-38
ref|XP_004165762.1| PREDICTED: remorin-like [Cucumis sativus]         163   5e-38
gb|AGB07445.1| remorin [Morus indica]                                 161   2e-37
ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|2235...   160   5e-37

>ref|XP_002267609.1| PREDICTED: remorin [Vitis vinifera] gi|147840877|emb|CAN73187.1|
           hypothetical protein VITISV_041529 [Vitis vinifera]
           gi|302143892|emb|CBI22753.3| unnamed protein product
           [Vitis vinifera]
          Length = 196

 Score =  172 bits (436), Expect = 1e-40
 Identities = 94/169 (55%), Positives = 116/169 (68%), Gaps = 4/169 (2%)
 Frame = +2

Query: 227 KDVTEEKSVVPAV---KEKADDSKALAVVEKDPEAIDEK-STGGSIDRDKVLARVETQKR 394
           KDVTEEK+V+P     +EK D++KALA+VEK PE I+EK S GGS++RD VLARV T+KR
Sbjct: 28  KDVTEEKAVIPPAPPPEEKPDETKALAIVEKVPEPIEEKGSEGGSVNRDTVLARVATEKR 87

Query: 395 LSLIRAWEDSEKTKAENKAQRTLAAIESWENSKKATVXXXXXXXXXXXXXXXXXXXXXMK 574
           LSLIRAWE+SEK KAENKAQ+ L+A E+WENS+KA+V                     MK
Sbjct: 88  LSLIRAWEESEKCKAENKAQKKLSATEAWENSQKASVEAELKKIEENLERKKAEYVEKMK 147

Query: 575 NKIALIHKESDEKKAMVQXXXXXXXXXXXXXXXXYRATNSAPKKLLGCF 721
           NKIA+IHKE++EK+AM++                YRAT SAPKKLLGCF
Sbjct: 148 NKIAIIHKEAEEKRAMIEARRGEDLLKAEEMAAKYRATGSAPKKLLGCF 196


>ref|XP_002510796.1| Remorin, putative [Ricinus communis] gi|223549911|gb|EEF51398.1|
           Remorin, putative [Ricinus communis]
          Length = 182

 Score =  164 bits (415), Expect = 3e-38
 Identities = 93/167 (55%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
 Frame = +2

Query: 227 KDVTEEKSVVPAV-KEKA-DDSKALAVVEKDPEAIDEKSTGGSIDRDKVLARVETQKRLS 400
           KDV EEKS +P   +EKA DDSKAL  VEK   +++EKST GS++RD VLARVET+KR+S
Sbjct: 19  KDVAEEKSAIPPPPQEKASDDSKALVAVEK---SVEEKSTEGSVNRDAVLARVETEKRVS 75

Query: 401 LIRAWEDSEKTKAENKAQRTLAAIESWENSKKATVXXXXXXXXXXXXXXXXXXXXXMKNK 580
           LIRAWE+SEK+KAENKA + L+AI SWENSKKA+V                     MKNK
Sbjct: 76  LIRAWEESEKSKAENKAHKKLSAIVSWENSKKASVEAELKQMEEKLEKKKAEYVEKMKNK 135

Query: 581 IALIHKESDEKKAMVQXXXXXXXXXXXXXXXXYRATNSAPKKLLGCF 721
           IALIHKE++EK+AM++                YRAT +APKKLLGCF
Sbjct: 136 IALIHKEAEEKRAMIEAKRGEDLLKAEETAAKYRATGTAPKKLLGCF 182


>ref|XP_004165762.1| PREDICTED: remorin-like [Cucumis sativus]
          Length = 189

 Score =  163 bits (413), Expect = 5e-38
 Identities = 85/166 (51%), Positives = 111/166 (66%), Gaps = 1/166 (0%)
 Frame = +2

Query: 227 KDVTEEKSVVPAVKE-KADDSKALAVVEKDPEAIDEKSTGGSIDRDKVLARVETQKRLSL 403
           KDVTEEKSV+P   E K DDSKAL +VEK PE  D K+T GS++RD VLA+V T+KRLSL
Sbjct: 22  KDVTEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSL 81

Query: 404 IRAWEDSEKTKAENKAQRTLAAIESWENSKKATVXXXXXXXXXXXXXXXXXXXXXMKNKI 583
           ++AWE+SEK+KAENKA + L+++ +WENS+KA+V                     MKNKI
Sbjct: 82  VKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLKKIEESLEKKKAKYIEQMKNKI 141

Query: 584 ALIHKESDEKKAMVQXXXXXXXXXXXXXXXXYRATNSAPKKLLGCF 721
           AL+HK ++EK+A+++                YRAT +APKKLLGCF
Sbjct: 142 ALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLGCF 187


>gb|AGB07445.1| remorin [Morus indica]
          Length = 199

 Score =  161 bits (408), Expect = 2e-37
 Identities = 89/168 (52%), Positives = 113/168 (67%), Gaps = 3/168 (1%)
 Frame = +2

Query: 227 KDVTEEKSVVP--AVKEKADDSKALAVVEKDPEAIDEKSTG-GSIDRDKVLARVETQKRL 397
           KDVTEEKSV+P    ++K D+SKALAVV+ +PE   EKS+  GSI+RD VLARV T+KRL
Sbjct: 32  KDVTEEKSVIPHPPPEDKPDESKALAVVDMEPEPAAEKSSSEGSINRDAVLARVATEKRL 91

Query: 398 SLIRAWEDSEKTKAENKAQRTLAAIESWENSKKATVXXXXXXXXXXXXXXXXXXXXXMKN 577
           SLIRAWE+SEK+KAENKA + +++I +WENSKKA+V                     MKN
Sbjct: 92  SLIRAWEESEKSKAENKAHKNVSSIGAWENSKKASVEAQLKKFEENLEKKKAEYVEKMKN 151

Query: 578 KIALIHKESDEKKAMVQXXXXXXXXXXXXXXXXYRATNSAPKKLLGCF 721
           KIALIHKE++E+KA+++                YRAT + PKKLLGCF
Sbjct: 152 KIALIHKEAEERKAIIEAKRGEELLKAEESAAKYRATGTGPKKLLGCF 199


>ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|223549013|gb|EEF50502.1|
           Remorin, putative [Ricinus communis]
          Length = 188

 Score =  160 bits (404), Expect = 5e-37
 Identities = 82/164 (50%), Positives = 106/164 (64%)
 Frame = +2

Query: 230 DVTEEKSVVPAVKEKADDSKALAVVEKDPEAIDEKSTGGSIDRDKVLARVETQKRLSLIR 409
           DV  +K+ VP  +EK DDSKALAVVEK PE+  +K++GGS+DRD  LA VE +KR S I+
Sbjct: 25  DVAHDKATVPTPEEKPDDSKALAVVEKVPESGPKKTSGGSLDRDIALAEVEKEKRNSFIK 84

Query: 410 AWEDSEKTKAENKAQRTLAAIESWENSKKATVXXXXXXXXXXXXXXXXXXXXXMKNKIAL 589
           AWEDSEK+KAENKAQ+ L+++ +WENSKKA +                     MKNK+AL
Sbjct: 85  AWEDSEKSKAENKAQKKLSSVTAWENSKKAALEAKLRKIEEQLEKKKAEYAEKMKNKVAL 144

Query: 590 IHKESDEKKAMVQXXXXXXXXXXXXXXXXYRATNSAPKKLLGCF 721
           +HK+++EK+AMV+                YRAT   PKKLLGCF
Sbjct: 145 VHKQAEEKRAMVEAQRGEEVLKAEEMAAKYRATGQTPKKLLGCF 188


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