BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001466
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   472   e-131
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   469   e-130
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   468   e-130
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   467   e-129
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   466   e-129

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  472 bits (1215), Expect = e-131
 Identities = 236/289 (81%), Positives = 246/289 (85%), Gaps = 6/289 (2%)
 Frame = -3

Query: 951 PFLAGKAVKLSPSTSELLGEGXXXXXXXXXXXXXXXXXXXXXXXXXXELLGEGRVTMRKT 772
           P LAG+A+KL+PS+S+LLGE                                GRVTMRKT
Sbjct: 11  PSLAGQAIKLAPSSSDLLGE--------------------------------GRVTMRKT 38

Query: 771 VGKP------TQWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRE 610
            G+P      + WYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRE
Sbjct: 39  AGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 98

Query: 609 LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 430
           LEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS
Sbjct: 99  LEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158

Query: 429 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 250
           ILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKN
Sbjct: 159 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 218

Query: 249 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 103
           GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  469 bits (1206), Expect = e-130
 Identities = 234/289 (80%), Positives = 244/289 (84%), Gaps = 6/289 (2%)
 Frame = -3

Query: 951 PFLAGKAVKLSPSTSELLGEGXXXXXXXXXXXXXXXXXXXXXXXXXXELLGEGRVTMRKT 772
           P LAGKA+KL P+ SE+LG                                EGRVTMRKT
Sbjct: 11  PSLAGKAIKLGPTASEILG--------------------------------EGRVTMRKT 38

Query: 771 VGKP------TQWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRE 610
            GKP      + WYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFSKNRE
Sbjct: 39  AGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRE 98

Query: 609 LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 430
           LEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQS
Sbjct: 99  LEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158

Query: 429 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 250
           ILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KN
Sbjct: 159 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218

Query: 249 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 103
           GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK 267


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  468 bits (1205), Expect = e-130
 Identities = 233/289 (80%), Positives = 243/289 (84%), Gaps = 6/289 (2%)
 Frame = -3

Query: 951 PFLAGKAVKLSPSTSELLGEGXXXXXXXXXXXXXXXXXXXXXXXXXXELLGEGRVTMRKT 772
           P  AG+AVKLSP+ S+LLGE                                GR+TMRKT
Sbjct: 11  PSFAGQAVKLSPTASDLLGE--------------------------------GRITMRKT 38

Query: 771 VGKP------TQWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRE 610
            GKP      + WYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRE
Sbjct: 39  AGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 98

Query: 609 LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 430
           LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQS
Sbjct: 99  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158

Query: 429 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 250
           ILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKELKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKN 218

Query: 249 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 103
           GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  467 bits (1201), Expect = e-129
 Identities = 233/289 (80%), Positives = 243/289 (84%), Gaps = 6/289 (2%)
 Frame = -3

Query: 951 PFLAGKAVKLSPSTSELLGEGXXXXXXXXXXXXXXXXXXXXXXXXXXELLGEGRVTMRKT 772
           P LAGKAVKL P+ SE++GE                                GR+TMRKT
Sbjct: 11  PSLAGKAVKLGPTASEIIGE--------------------------------GRITMRKT 38

Query: 771 VGKP------TQWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRE 610
            GKP      + WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF+KNRE
Sbjct: 39  AGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 98

Query: 609 LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 430
           LEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQS
Sbjct: 99  LEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158

Query: 429 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 250
           ILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KN
Sbjct: 159 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218

Query: 249 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 103
           GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score =  466 bits (1200), Expect = e-129
 Identities = 233/289 (80%), Positives = 243/289 (84%), Gaps = 6/289 (2%)
 Frame = -3

Query: 951 PFLAGKAVKLSPSTSELLGEGXXXXXXXXXXXXXXXXXXXXXXXXXXELLGEGRVTMRKT 772
           P LAGKA+KL P+ SE+L E                                GRVTMRKT
Sbjct: 11  PSLAGKAIKLGPTASEILSE--------------------------------GRVTMRKT 38

Query: 771 VGKP------TQWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRE 610
            GKP      + WYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFSKNRE
Sbjct: 39  AGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRE 98

Query: 609 LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 430
           LEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQS
Sbjct: 99  LEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158

Query: 429 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 250
           ILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KN
Sbjct: 159 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218

Query: 249 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 103
           GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK 267