BLASTX nr result
ID: Coptis24_contig00001459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001459
(3031 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527822.1| Squamous cell carcinoma antigen recognized b... 662 0.0
ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen r... 645 0.0
emb|CBI29629.3| unnamed protein product [Vitis vinifera] 645 0.0
ref|XP_003539380.1| PREDICTED: squamous cell carcinoma antigen r... 629 e-177
ref|XP_003548657.1| PREDICTED: squamous cell carcinoma antigen r... 625 e-176
>ref|XP_002527822.1| Squamous cell carcinoma antigen recognized by T-cells, putative
[Ricinus communis] gi|223532746|gb|EEF34525.1| Squamous
cell carcinoma antigen recognized by T-cells, putative
[Ricinus communis]
Length = 852
Score = 662 bits (1709), Expect = 0.0
Identities = 329/563 (58%), Positives = 418/563 (74%), Gaps = 5/563 (0%)
Frame = +1
Query: 1357 EDVENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHD 1536
E ++++E L+ NP++YD HVQYIK +RK+GE++KLR ARE+MS FPL+P +W +WA D
Sbjct: 66 EQLKSLEAELSSNPSNYDAHVQYIKLLRKMGEIEKLREAREAMSASFPLTPIMWQEWAKD 125
Query: 1537 EAXXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLR 1707
EA V +LY+R + DYLSVPLWCDYLN+VQ+ + S SK R
Sbjct: 126 EASLSTGPEGYS---VVEKLYERGVSDYLSVPLWCDYLNYVQECNLLVRECSSDGLSKAR 182
Query: 1708 DLFERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXX 1887
+++ERAL AGLHV +G K+W++Y +FEQ IL T+D +T+ KE QV RIR++FHRQ
Sbjct: 183 NIYERALTAAGLHVAEGNKLWDSYREFEQAILLTMDETDTKVKESQVQRIRNIFHRQLSV 242
Query: 1888 XXXXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-S 2064
AYK+WE E GN ++ DGI +V+S+YQKAMEMY+ RA +EE I
Sbjct: 243 PLHNLRSTLLAYKAWEVEQGNVLDTESSYLDGISSHVASAYQKAMEMYNTRAQHEEQIYK 302
Query: 2065 GEITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVP 2244
+I+ EK Q+FM YL FE+++GDPAR Q+LYERA+TEFPVSSD+WLDYT Y+D+T+KV
Sbjct: 303 QDISEQEKFQNFMNYLNFEKTAGDPARVQVLYERAITEFPVSSDIWLDYTCYLDKTLKVG 362
Query: 2245 KIVLDIHARATRNCTWVGELWVRYLLALERAHSSEELMSTVFEQSLQCV-SSSEEYLDLF 2421
IV D + RATRNC+WVGELWVRYLL+LER+ + E+ +STVFE+SLQC+ S++EEYLDLF
Sbjct: 363 NIVKDAYFRATRNCSWVGELWVRYLLSLERSRAHEKEISTVFEESLQCLFSTAEEYLDLF 422
Query: 2422 LTRIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELS 2601
LTR+DGLRRRI + L YS+I++T Q A+DYLSP LKN +GLL LH YWARLEL+
Sbjct: 423 LTRVDGLRRRILFGSEAEGVLNYSLIKETMQHASDYLSPQLKNTEGLLRLHAYWARLELN 482
Query: 2602 FGKDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSE 2781
GKDL A RGVWESLLK SGSM E W+ YI ME E GH+ EAR IYKRCYSK+FTGTGSE
Sbjct: 483 LGKDLVAARGVWESLLKISGSMLEVWQGYITMETELGHINEARSIYKRCYSKRFTGTGSE 542
Query: 2782 DICHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKA 2961
DICHSW+RFEREFG L+D+DHAV+KVTPRLEEL+LYR QQESK+ VA QKE+ +
Sbjct: 543 DICHSWLRFEREFGALEDFDHAVQKVTPRLEELQLYRMQQESKAFVASADQKENPIKRNV 602
Query: 2962 PQKRKMGAKSTEELPTSKRQKGT 3030
+KRK G + T+E +KR+K T
Sbjct: 603 REKRKGGPEYTDEQSPAKRKKQT 625
>ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Vitis vinifera]
Length = 838
Score = 645 bits (1663), Expect = 0.0
Identities = 326/561 (58%), Positives = 411/561 (73%), Gaps = 5/561 (0%)
Frame = +1
Query: 1363 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1542
++ +E ++ +P+ YD HV+YIK +RK+GE++KLR ARE+MS L PL+P +W +WA DE
Sbjct: 44 LQTLESEVSSDPSKYDAHVEYIKCLRKLGEIEKLREAREAMSALHPLTPLMWQEWARDEL 103
Query: 1543 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1713
+ +LY++ + DYLSVPLWCDYLNFVQ+H + S K R+L
Sbjct: 104 TARPEAFLE-----IEKLYEKGVFDYLSVPLWCDYLNFVQEHDPAVRECSSEGILKARNL 158
Query: 1714 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1893
FERAL AGLHV +G KIWE Y +FEQ IL TID + E KEKQV RIR++FHRQ
Sbjct: 159 FERALTAAGLHVAEGSKIWEVYREFEQAILLTIDENDNEAKEKQVQRIRNIFHRQLSVPL 218
Query: 1894 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2070
A+K+WE E GN +++S DGI +V+S+Y+KAM+MY ARA EE I +
Sbjct: 219 ANMRSTLLAFKAWEVEQGNVLDVNSSSMDGISSHVASAYEKAMDMYDARAHLEEQIVRQD 278
Query: 2071 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2250
I+ +E+ Q F+ YL FEQSSGDPAR QILYERA+TEFPVS DLWLDYT+Y+D+T+KV +
Sbjct: 279 ISDSERHQQFLNYLNFEQSSGDPARVQILYERAITEFPVSRDLWLDYTQYLDKTLKVANV 338
Query: 2251 VLDIHARATRNCTWVGELWVRYLLALERAHSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2427
V D+++RA +NC WVGELWV+YLL+LERA +SE +STVF++SLQC S EYL+LFLT
Sbjct: 339 VRDVYSRAVKNCPWVGELWVQYLLSLERARASEREISTVFDKSLQCTFSRFGEYLNLFLT 398
Query: 2428 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2607
R+DGLRRRI+L ++ LEY++IRD FQ A+DYLSPHLK D L+ LH YWARLEL+
Sbjct: 399 RVDGLRRRISLPGQ-EEVLEYALIRDAFQYASDYLSPHLKCTDDLVRLHAYWARLELNLN 457
Query: 2608 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2787
KDL A RGVWESLLK SGSMF AW+ YI ME+E GH+ EAR IYKRCYSK+F GTGSEDI
Sbjct: 458 KDLVAARGVWESLLKNSGSMFGAWQGYIAMELEAGHINEARSIYKRCYSKRFAGTGSEDI 517
Query: 2788 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKAPQ 2967
CHSW+RFEREFGTL+D +HAVRKVTPRL EL+L++ QESKS A Q E+ H K A +
Sbjct: 518 CHSWLRFEREFGTLEDLEHAVRKVTPRLAELQLFK-LQESKSTAASTDQIENPHKKNARE 576
Query: 2968 KRKMGAKSTEELPTSKRQKGT 3030
KRK + T+E P +KRQK T
Sbjct: 577 KRKSTSSRTDEQPPAKRQKDT 597
>emb|CBI29629.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 645 bits (1663), Expect = 0.0
Identities = 326/561 (58%), Positives = 411/561 (73%), Gaps = 5/561 (0%)
Frame = +1
Query: 1363 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1542
++ +E ++ +P+ YD HV+YIK +RK+GE++KLR ARE+MS L PL+P +W +WA DE
Sbjct: 44 LQTLESEVSSDPSKYDAHVEYIKCLRKLGEIEKLREAREAMSALHPLTPLMWQEWARDEL 103
Query: 1543 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1713
+ +LY++ + DYLSVPLWCDYLNFVQ+H + S K R+L
Sbjct: 104 TARPEAFLE-----IEKLYEKGVFDYLSVPLWCDYLNFVQEHDPAVRECSSEGILKARNL 158
Query: 1714 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1893
FERAL AGLHV +G KIWE Y +FEQ IL TID + E KEKQV RIR++FHRQ
Sbjct: 159 FERALTAAGLHVAEGSKIWEVYREFEQAILLTIDENDNEAKEKQVQRIRNIFHRQLSVPL 218
Query: 1894 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2070
A+K+WE E GN +++S DGI +V+S+Y+KAM+MY ARA EE I +
Sbjct: 219 ANMRSTLLAFKAWEVEQGNVLDVNSSSMDGISSHVASAYEKAMDMYDARAHLEEQIVRQD 278
Query: 2071 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2250
I+ +E+ Q F+ YL FEQSSGDPAR QILYERA+TEFPVS DLWLDYT+Y+D+T+KV +
Sbjct: 279 ISDSERHQQFLNYLNFEQSSGDPARVQILYERAITEFPVSRDLWLDYTQYLDKTLKVANV 338
Query: 2251 VLDIHARATRNCTWVGELWVRYLLALERAHSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2427
V D+++RA +NC WVGELWV+YLL+LERA +SE +STVF++SLQC S EYL+LFLT
Sbjct: 339 VRDVYSRAVKNCPWVGELWVQYLLSLERARASEREISTVFDKSLQCTFSRFGEYLNLFLT 398
Query: 2428 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2607
R+DGLRRRI+L ++ LEY++IRD FQ A+DYLSPHLK D L+ LH YWARLEL+
Sbjct: 399 RVDGLRRRISLPGQ-EEVLEYALIRDAFQYASDYLSPHLKCTDDLVRLHAYWARLELNLN 457
Query: 2608 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2787
KDL A RGVWESLLK SGSMF AW+ YI ME+E GH+ EAR IYKRCYSK+F GTGSEDI
Sbjct: 458 KDLVAARGVWESLLKNSGSMFGAWQGYIAMELEAGHINEARSIYKRCYSKRFAGTGSEDI 517
Query: 2788 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKAPQ 2967
CHSW+RFEREFGTL+D +HAVRKVTPRL EL+L++ QESKS A Q E+ H K A +
Sbjct: 518 CHSWLRFEREFGTLEDLEHAVRKVTPRLAELQLFK-LQESKSTAASTDQIENPHKKNARE 576
Query: 2968 KRKMGAKSTEELPTSKRQKGT 3030
KRK + T+E P +KRQK T
Sbjct: 577 KRKSTSSRTDEQPPAKRQKDT 597
>ref|XP_003539380.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Glycine max]
Length = 837
Score = 629 bits (1623), Expect = e-177
Identities = 316/558 (56%), Positives = 409/558 (73%), Gaps = 6/558 (1%)
Frame = +1
Query: 1363 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1542
+E+++ L NP++YD H+QYI+ +R++G++DKL ARE+MS+LFPLSP++W QW DE
Sbjct: 52 IESLQTELVTNPSNYDAHLQYIRLLRRMGDVDKLSRAREAMSELFPLSPTMWRQWIKDEL 111
Query: 1543 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1713
+ +LY+R + DYLSV LWCDY+NFVQ+ SP SK RDL
Sbjct: 112 SLNTAARPEAFSR-ILKLYERGVFDYLSVSLWCDYINFVQEFDPMVRQFSPTGISKARDL 170
Query: 1714 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1893
FE AL AGLHV +G KIWEAY K+EQ IL T D + + KEKQV RIRSLFHRQ
Sbjct: 171 FESALTAAGLHVAEGSKIWEAYKKYEQDILLTFDDTDEQAKEKQVQRIRSLFHRQLSVPL 230
Query: 1894 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2070
AYK+WE E G+ + I P+V++SYQKA+EMY+AR EE I S
Sbjct: 231 AGMSSTITAYKTWEMEQGSLQDVESIDLVDIYPHVAASYQKALEMYNARFHLEEQILSPN 290
Query: 2071 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2250
I+ +E+LQH+M YLKFEQSSG PAR Q+LYERA+T+FP++ DLWLD TR +D T+KV I
Sbjct: 291 ISDSERLQHYMNYLKFEQSSGMPARIQVLYERAITDFPITPDLWLDCTRNLDNTLKVGNI 350
Query: 2251 VLDIHARATRNCTWVGELWVRYLLALERAHSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2427
V ++++RAT+NC WVGELWVRY+L+LER H+SE+ +S +FE+SL C S+ +EYLDLFLT
Sbjct: 351 VSNVYSRATKNCPWVGELWVRYMLSLERGHASEKDLSEIFEKSLLCTFSTLDEYLDLFLT 410
Query: 2428 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2607
R+DGLRRR +A S+++ LEY +IR+TFQRA+DYLSP+LKN +GLL LH YWARLE G
Sbjct: 411 RVDGLRRR--MASSSEEDLEYKIIRETFQRASDYLSPYLKNTEGLLHLHAYWARLETKLG 468
Query: 2608 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2787
KD+ A RGVWE+ LK GSM E+W YI ME+E GH+ EAR IYKRCYSK+F+GTGSEDI
Sbjct: 469 KDITAARGVWENCLKLCGSMLESWTGYIAMEVELGHINEARSIYKRCYSKRFSGTGSEDI 528
Query: 2788 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKK-AP 2964
C SW+RFEREFG L+D+DHA+ KVTPR++ELKL+R QQESKS A++ + ++K+ A
Sbjct: 529 CQSWLRFEREFGKLEDFDHALHKVTPRMDELKLFRMQQESKS-----AEESEKNTKRNAR 583
Query: 2965 QKRKMGAKSTEELPTSKR 3018
+KRK+G+ TEE SKR
Sbjct: 584 EKRKLGSDITEEQSPSKR 601
>ref|XP_003548657.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Glycine max]
Length = 847
Score = 625 bits (1611), Expect = e-176
Identities = 313/557 (56%), Positives = 402/557 (72%), Gaps = 5/557 (0%)
Frame = +1
Query: 1363 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1542
+E+++ L NP++YD H+QYI +R++G++DKL ARE+MS+LFPLSP++W QW DE
Sbjct: 62 LESLQTELVTNPSNYDAHLQYITLLRRMGDVDKLSRAREAMSELFPLSPAIWRQWIKDEL 121
Query: 1543 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1713
+ +LY+R + DYLSV LWCDY+NFVQ+ SP SK RDL
Sbjct: 122 SLNTATRPEAFSR-ILKLYERGVFDYLSVSLWCDYINFVQEFDPMVRQCSPTGISKARDL 180
Query: 1714 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1893
FE AL AGLHV +G KIWEAY K+EQ IL T D I+ + KEKQV IRSLFHRQ
Sbjct: 181 FESALTAAGLHVAEGSKIWEAYRKYEQAILLTFDDIDAQAKEKQVQSIRSLFHRQLSVPL 240
Query: 1894 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2070
AYK+WE E G+ + I P+V++SYQKA++MY+AR EE I S
Sbjct: 241 AGMSSTITAYKTWEVEQGSLQDVESIDLVDIYPHVAASYQKALDMYNARFHLEEQILSPN 300
Query: 2071 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2250
++ +E+LQH+M YLKFEQSSG PAR Q+LYERA+T+FP++ DLWLDYT +D T+KV I
Sbjct: 301 VSDSERLQHYMNYLKFEQSSGTPARIQVLYERAITDFPITPDLWLDYTCNLDNTLKVGNI 360
Query: 2251 VLDIHARATRNCTWVGELWVRYLLALERAHSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2427
V ++++RAT+NC WVGELWVR +L+LER H+SE+ +S +FE+SLQC S+ +EYLDLFLT
Sbjct: 361 VNNVYSRATKNCPWVGELWVRCMLSLERGHASEKDLSEIFEKSLQCTFSTLDEYLDLFLT 420
Query: 2428 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2607
R+DGLRRR +A S ++ LEY +IR+TFQRA+DYLSP+LKN +GLL LH YWARLE G
Sbjct: 421 RVDGLRRR--MASSNEEDLEYKIIRETFQRASDYLSPYLKNTEGLLHLHAYWARLETKLG 478
Query: 2608 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2787
KD+ A RGVWE+ LK GSM E+W YI ME+E GH+ EAR IYKRCYSK+F+GTGSEDI
Sbjct: 479 KDITAARGVWENCLKICGSMLESWTGYIAMEVELGHINEARSIYKRCYSKRFSGTGSEDI 538
Query: 2788 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKAPQ 2967
C SW+RFEREFG L+D+DHA+ KVTPRLEELKL+R QQESK+ + E + A +
Sbjct: 539 CQSWLRFEREFGKLEDFDHALHKVTPRLEELKLFRIQQESKT----AEESEKNPKRNARE 594
Query: 2968 KRKMGAKSTEELPTSKR 3018
KRK+G+ TEE +KR
Sbjct: 595 KRKLGSDITEEQYPTKR 611