BLASTX nr result

ID: Coptis24_contig00001450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001450
         (1880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513702.1| protein with unknown function [Ricinus commu...   811   0.0  
gb|ABU98948.1| GDP-dissociation inhibitor [Lupinus albus]             810   0.0  
ref|XP_004138948.1| PREDICTED: rab GDP dissociation inhibitor al...   809   0.0  
ref|XP_002280606.1| PREDICTED: rab GDP dissociation inhibitor al...   809   0.0  
ref|XP_002331641.1| predicted protein [Populus trichocarpa] gi|1...   809   0.0  

>ref|XP_002513702.1| protein with unknown function [Ricinus communis]
            gi|223547153|gb|EEF48649.1| protein with unknown function
            [Ricinus communis]
          Length = 444

 Score =  811 bits (2094), Expect = 0.0
 Identities = 393/428 (91%), Positives = 410/428 (95%)
 Frame = -1

Query: 1766 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK 1587
            MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMD+NDYYGGES SLNL QLWKRFRG DK
Sbjct: 1    MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDKNDYYGGESASLNLNQLWKRFRGSDK 60

Query: 1586 PPAHLGSSRDYNVDMIPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFNKGKVHKVPA 1407
            PPAHLGSSRDYNVDMIPKFMMANG LVR LIHTDVTKYL FKAVDGSFV+NKGKVHKVPA
Sbjct: 61   PPAHLGSSRDYNVDMIPKFMMANGNLVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPA 120

Query: 1406 TDMEALKSPLMGLFEKRRARKFFIYVQDYKESEPQTHEGMDLTRVTTRQLIAKYGLDDNT 1227
            TDMEALKSPLMG+FEKRRARKFFIYVQDY ES+P+THEGMDLTRVTTR+LIAKYGLDDNT
Sbjct: 121  TDMEALKSPLMGIFEKRRARKFFIYVQDYNESDPKTHEGMDLTRVTTRELIAKYGLDDNT 180

Query: 1226 VDFIGHAVALHRDDRYLDEPALDTVMRMKLYSESVARFQGGSPYIYPLYGLAELPQAFAR 1047
            +DFIGHA+ALHRDDRYLDEPALDTVMRMKLY+ES+ARFQGGSPYIYPLYGL ELPQAFAR
Sbjct: 181  MDFIGHALALHRDDRYLDEPALDTVMRMKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240

Query: 1046 LSAVYGGTYMLNKPECKVEFDEEGKVFGVTSEGETARCKKVVCDPSYLPNKVRKVGRVAR 867
            LSAVYGGTYMLNKPECKVEFDEEGKV GVTSEGETA+CKKVVCDPSYLPNK RKV RVAR
Sbjct: 241  LSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKARKVSRVAR 300

Query: 866  AICIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAAKGKFIAFVSTEAET 687
            AI IMSHPIPNTNDSHS QVILPQKQLGRRSDMYLFCCSYSHNVA KGK+IAFVS+EAET
Sbjct: 301  AIAIMSHPIPNTNDSHSAQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKYIAFVSSEAET 360

Query: 686  DHPEVELKQGIDLLGPVDEIFFDAYDRYEPVNEPSLDNCFISMSYDATTHFESTVMDVLN 507
            D+PEVELK GIDLLGPVDEIFF+ YDRYEPVNEPSLDNCFIS SYDATTHFESTV DVLN
Sbjct: 361  DNPEVELKPGIDLLGPVDEIFFEVYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLN 420

Query: 506  MYTLITGK 483
            MY++ITGK
Sbjct: 421  MYSMITGK 428


>gb|ABU98948.1| GDP-dissociation inhibitor [Lupinus albus]
          Length = 444

 Score =  810 bits (2091), Expect = 0.0
 Identities = 392/428 (91%), Positives = 408/428 (95%)
 Frame = -1

Query: 1766 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK 1587
            MDEEYDVIVLGTGL ECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK
Sbjct: 1    MDEEYDVIVLGTGLXECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK 60

Query: 1586 PPAHLGSSRDYNVDMIPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFNKGKVHKVPA 1407
            PP HLGSSRDYNVDM+PKFMMANGTLVR LIHTDVTKYL FKAVDGSFVFNKGKVHKVPA
Sbjct: 61   PPPHLGSSRDYNVDMVPKFMMANGTLVRVLIHTDVTKYLYFKAVDGSFVFNKGKVHKVPA 120

Query: 1406 TDMEALKSPLMGLFEKRRARKFFIYVQDYKESEPQTHEGMDLTRVTTRQLIAKYGLDDNT 1227
            TDMEALKSPLMG+FEKRRARKFFIYVQDY ES+P+THEGMDLTRVTTR+LIAKYGLDDNT
Sbjct: 121  TDMEALKSPLMGIFEKRRARKFFIYVQDYDESDPKTHEGMDLTRVTTRELIAKYGLDDNT 180

Query: 1226 VDFIGHAVALHRDDRYLDEPALDTVMRMKLYSESVARFQGGSPYIYPLYGLAELPQAFAR 1047
            +DFIGHA+ALHRDDRYL+EPALDTV RMKLY+ES+ARFQGGS YIYPLYGL ELPQ F R
Sbjct: 181  IDFIGHAIALHRDDRYLNEPALDTVKRMKLYAESLARFQGGSSYIYPLYGLGELPQGFVR 240

Query: 1046 LSAVYGGTYMLNKPECKVEFDEEGKVFGVTSEGETARCKKVVCDPSYLPNKVRKVGRVAR 867
            LSAVYGGTYMLNKPECKV+FDEEGKV GVTSEGETA+CKKVVCDPSYLPNKVRKVGRVAR
Sbjct: 241  LSAVYGGTYMLNKPECKVKFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVAR 300

Query: 866  AICIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAAKGKFIAFVSTEAET 687
            AI IMSHPIPNTNDSHS QVILPQKQLGR+SDMYLFCCSYSHNVA KGKFIAFVS EAET
Sbjct: 301  AIVIMSHPIPNTNDSHSAQVILPQKQLGRKSDMYLFCCSYSHNVAPKGKFIAFVSAEAET 360

Query: 686  DHPEVELKQGIDLLGPVDEIFFDAYDRYEPVNEPSLDNCFISMSYDATTHFESTVMDVLN 507
             HPE ELK GIDLLGPVDEIF+D YDRYEPVNEP+LDNCFIS SYDATTHFESTV+DVLN
Sbjct: 361  GHPESELKPGIDLLGPVDEIFYDIYDRYEPVNEPTLDNCFISTSYDATTHFESTVLDVLN 420

Query: 506  MYTLITGK 483
            MYTLITGK
Sbjct: 421  MYTLITGK 428


>ref|XP_004138948.1| PREDICTED: rab GDP dissociation inhibitor alpha-like [Cucumis
            sativus] gi|449522606|ref|XP_004168317.1| PREDICTED: rab
            GDP dissociation inhibitor alpha-like [Cucumis sativus]
          Length = 444

 Score =  809 bits (2090), Expect = 0.0
 Identities = 390/428 (91%), Positives = 412/428 (96%)
 Frame = -1

Query: 1766 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK 1587
            MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES+SLNLIQLWKRFRGDDK
Sbjct: 1    MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGDDK 60

Query: 1586 PPAHLGSSRDYNVDMIPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFNKGKVHKVPA 1407
            PPAHLGSSRDYNVDMIPKFMMANGTLVR LIHTDVTKYLSFKAVDGS+V+NKGK+HKVPA
Sbjct: 61   PPAHLGSSRDYNVDMIPKFMMANGTLVRVLIHTDVTKYLSFKAVDGSYVYNKGKIHKVPA 120

Query: 1406 TDMEALKSPLMGLFEKRRARKFFIYVQDYKESEPQTHEGMDLTRVTTRQLIAKYGLDDNT 1227
            TDMEALKSPLMGLFEKRRARKFFI+VQDY ES P+THEGMDL RVTT++LIAKYGLDDNT
Sbjct: 121  TDMEALKSPLMGLFEKRRARKFFIFVQDYDESNPKTHEGMDLARVTTKELIAKYGLDDNT 180

Query: 1226 VDFIGHAVALHRDDRYLDEPALDTVMRMKLYSESVARFQGGSPYIYPLYGLAELPQAFAR 1047
            +DFIGHA+ALHRDDRYLD PALDTV RMKLY+ES+ARFQGGSPYIYPLYGL ELPQAFAR
Sbjct: 181  IDFIGHALALHRDDRYLDLPALDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240

Query: 1046 LSAVYGGTYMLNKPECKVEFDEEGKVFGVTSEGETARCKKVVCDPSYLPNKVRKVGRVAR 867
            LSAVYGGTYMLNKPECKVEFD+EGKV GVTSEGETA+CKKVVCDPSYL NKVRKVG+VAR
Sbjct: 241  LSAVYGGTYMLNKPECKVEFDDEGKVIGVTSEGETAKCKKVVCDPSYLSNKVRKVGKVAR 300

Query: 866  AICIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAAKGKFIAFVSTEAET 687
            AI IMSH IPNTNDSHSVQ+I+PQKQLGRRSDMY+FCCSYSHNVA +GKFIAFV+TEAET
Sbjct: 301  AIAIMSHTIPNTNDSHSVQIIIPQKQLGRRSDMYVFCCSYSHNVAPRGKFIAFVTTEAET 360

Query: 686  DHPEVELKQGIDLLGPVDEIFFDAYDRYEPVNEPSLDNCFISMSYDATTHFESTVMDVLN 507
            DHPE ELK GIDLLG VDEIFFD YDRYEPVNEPSLDNCFISMSYDATTHFESTV+DVLN
Sbjct: 361  DHPESELKPGIDLLGAVDEIFFDTYDRYEPVNEPSLDNCFISMSYDATTHFESTVVDVLN 420

Query: 506  MYTLITGK 483
            MYT+ITGK
Sbjct: 421  MYTMITGK 428


>ref|XP_002280606.1| PREDICTED: rab GDP dissociation inhibitor alpha [Vitis vinifera]
            gi|147840053|emb|CAN70679.1| hypothetical protein
            VITISV_044153 [Vitis vinifera]
            gi|296084382|emb|CBI24770.3| unnamed protein product
            [Vitis vinifera]
          Length = 444

 Score =  809 bits (2090), Expect = 0.0
 Identities = 391/428 (91%), Positives = 412/428 (96%)
 Frame = -1

Query: 1766 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK 1587
            MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES+SLNLIQLWKRF+G+DK
Sbjct: 1    MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFKGNDK 60

Query: 1586 PPAHLGSSRDYNVDMIPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFNKGKVHKVPA 1407
            PPA LGSSRDYNVDMIPKFMMANGTLVR LIHTDVTKYL FKAVDGS+VFNKGKVHKVPA
Sbjct: 61   PPASLGSSRDYNVDMIPKFMMANGTLVRVLIHTDVTKYLYFKAVDGSYVFNKGKVHKVPA 120

Query: 1406 TDMEALKSPLMGLFEKRRARKFFIYVQDYKESEPQTHEGMDLTRVTTRQLIAKYGLDDNT 1227
             D+EALKSPLMGLFEKRRARKFFI+VQDY E++P+THEGMDLTRVTTR+LIAKYGLDDNT
Sbjct: 121  NDVEALKSPLMGLFEKRRARKFFIFVQDYDENDPRTHEGMDLTRVTTRELIAKYGLDDNT 180

Query: 1226 VDFIGHAVALHRDDRYLDEPALDTVMRMKLYSESVARFQGGSPYIYPLYGLAELPQAFAR 1047
            +DFIGHA+ALHRDD YL+EPA+DTV RMKLYSES+ARFQGGSPYIYPLYGL ELPQAFAR
Sbjct: 181  IDFIGHAIALHRDDCYLNEPAIDTVKRMKLYSESIARFQGGSPYIYPLYGLGELPQAFAR 240

Query: 1046 LSAVYGGTYMLNKPECKVEFDEEGKVFGVTSEGETARCKKVVCDPSYLPNKVRKVGRVAR 867
            LSAVYGGTYMLNKPECKVEFDEEGK  GVTSEGETARCKKVVCDPSYLPNKVRKVGRVAR
Sbjct: 241  LSAVYGGTYMLNKPECKVEFDEEGKAVGVTSEGETARCKKVVCDPSYLPNKVRKVGRVAR 300

Query: 866  AICIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAAKGKFIAFVSTEAET 687
            AICIMSHPIPNT+DSHSVQVILPQKQLGR+SDMYLFCCSYSHNVA KGKFIAFVSTEAET
Sbjct: 301  AICIMSHPIPNTSDSHSVQVILPQKQLGRKSDMYLFCCSYSHNVAPKGKFIAFVSTEAET 360

Query: 686  DHPEVELKQGIDLLGPVDEIFFDAYDRYEPVNEPSLDNCFISMSYDATTHFESTVMDVLN 507
            DHPE ELK GIDLLGPVDEIF+D Y+R+EPVNEPSLD CFIS SYDATTHFESTVMDVLN
Sbjct: 361  DHPESELKPGIDLLGPVDEIFYDIYERFEPVNEPSLDQCFISTSYDATTHFESTVMDVLN 420

Query: 506  MYTLITGK 483
            MYT+ITGK
Sbjct: 421  MYTMITGK 428


>ref|XP_002331641.1| predicted protein [Populus trichocarpa] gi|118484203|gb|ABK93982.1|
            unknown [Populus trichocarpa] gi|118487234|gb|ABK95445.1|
            unknown [Populus trichocarpa] gi|222874037|gb|EEF11168.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  809 bits (2089), Expect = 0.0
 Identities = 392/428 (91%), Positives = 412/428 (96%)
 Frame = -1

Query: 1766 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK 1587
            MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES SLNLIQLWKRFRG+DK
Sbjct: 1    MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESASLNLIQLWKRFRGNDK 60

Query: 1586 PPAHLGSSRDYNVDMIPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSFVFNKGKVHKVPA 1407
            PPAHLGSSRDYNVDMIPKFMMANG LVR LIHTDVTKYL FKAVDG +VFNKGKVHKVPA
Sbjct: 61   PPAHLGSSRDYNVDMIPKFMMANGNLVRVLIHTDVTKYLYFKAVDGGYVFNKGKVHKVPA 120

Query: 1406 TDMEALKSPLMGLFEKRRARKFFIYVQDYKESEPQTHEGMDLTRVTTRQLIAKYGLDDNT 1227
            TDMEALKSPLMGLFEKRRARKFFIYVQ+Y++S+P+THEGMDLTRVTTR+LIAKYGLDDNT
Sbjct: 121  TDMEALKSPLMGLFEKRRARKFFIYVQNYEDSDPKTHEGMDLTRVTTRELIAKYGLDDNT 180

Query: 1226 VDFIGHAVALHRDDRYLDEPALDTVMRMKLYSESVARFQGGSPYIYPLYGLAELPQAFAR 1047
            +DFIGHA+ALHRDDRYL+EPALDTV RMKLY+ES+ARFQGGSPYIYPLYGL ELPQAFAR
Sbjct: 181  IDFIGHALALHRDDRYLNEPALDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240

Query: 1046 LSAVYGGTYMLNKPECKVEFDEEGKVFGVTSEGETARCKKVVCDPSYLPNKVRKVGRVAR 867
            LSAVYGGTYMLNKPECKVEF+EEGKV GVTSEGETA+CKKVVCDPSYLPNK RKVGRVAR
Sbjct: 241  LSAVYGGTYMLNKPECKVEFNEEGKVAGVTSEGETAKCKKVVCDPSYLPNKARKVGRVAR 300

Query: 866  AICIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAAKGKFIAFVSTEAET 687
            AI IMSHPIP+T++SHSVQVILPQKQLGRRSDMYLFCCSY+HNVA KGKFIAFVSTEAET
Sbjct: 301  AIAIMSHPIPSTDESHSVQVILPQKQLGRRSDMYLFCCSYTHNVAPKGKFIAFVSTEAET 360

Query: 686  DHPEVELKQGIDLLGPVDEIFFDAYDRYEPVNEPSLDNCFISMSYDATTHFESTVMDVLN 507
            DHPE ELK GIDLLGPVDEIFFD YDRYEPVNEPSLDNCFIS SYDATTHFESTV DVLN
Sbjct: 361  DHPESELKPGIDLLGPVDEIFFDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLN 420

Query: 506  MYTLITGK 483
            MYT+ITGK
Sbjct: 421  MYTMITGK 428


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