BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001449
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              102   7e-20
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   102   7e-20
ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vin...   102   9e-20

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  103 bits (257), Expect = 3e-20
 Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 18/123 (14%)
 Frame = -1

Query: 606 KQKNLTTLVENFKKCSEI---RSRHLVYEKTIDRLALAKH----------QNKFDDITKQ 466
           +++NL  LV+ FKK SE+   R++  +YE+T+ RLA AK           Q K+ DI+++
Sbjct: 35  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISRE 94

Query: 465 GFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFDETHK-LSD 301
           GFA+RLISLYGK GMFDHA K+FDE+P    ER+V ++NALL A V S KFD+     S+
Sbjct: 95  GFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSE 154

Query: 300 FPS 292
            PS
Sbjct: 155 LPS 157


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  102 bits (254), Expect = 7e-20
 Identities = 57/113 (50%), Positives = 78/113 (69%), Gaps = 17/113 (15%)
 Frame = -1

Query: 606 KQKNLTTLVENFKKCSEI---RSRHLVYEKTIDRLALAKH----------QNKFDDITKQ 466
           +++NL  LV+ FKK SE+   R++  +YE+T+ RLA AK           Q K+ DI+++
Sbjct: 43  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISRE 102

Query: 465 GFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFDE 319
           GFA+RLISLYGK GMFDHA K+FDE+P    ER+V ++NALL A V S KFD+
Sbjct: 103 GFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDK 155


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  102 bits (254), Expect = 7e-20
 Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 18/123 (14%)
 Frame = -1

Query: 606 KQKNLTTLVENFKKCSEI---RSRHLVYEKTIDRLALAKH----------QNKFDDITKQ 466
           +++NL  LV+ FKK SE+   R++  +YE+T+ RLA AK           Q K+ DI+++
Sbjct: 35  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISRE 94

Query: 465 GFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFDETHK-LSD 301
           GFA+RLI+LYGK GMFDHA K+FDE+P    ER+V ++NALL A V S KFD+     S+
Sbjct: 95  GFAVRLITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSE 154

Query: 300 FPS 292
            PS
Sbjct: 155 LPS 157


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  102 bits (254), Expect = 7e-20
 Identities = 59/123 (47%), Positives = 81/123 (65%), Gaps = 18/123 (14%)
 Frame = -1

Query: 606 KQKNLTTLVENFKKCSEI---RSRHLVYEKTIDRLALAKH----------QNKFDDITKQ 466
           +++NL  LV+ FKK SE+   R++  +YE+T+ RLA AK           Q K+ DI+++
Sbjct: 35  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISRE 94

Query: 465 GFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFDETHK-LSD 301
           GFA+RLISLYGK GMFDHA K+FDE+P    ER+V ++N LL A V S KFD+     S+
Sbjct: 95  GFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSE 154

Query: 300 FPS 292
            PS
Sbjct: 155 LPS 157


>ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
           gi|209954150|emb|CAQ77586.1| succinate dehydrogenase
           subunit 3 [Vitis vinifera] gi|239764777|gb|ACS15245.1|
           succinate dehydrogenase subunit 3 [Vitis vinifera]
          Length = 168

 Score =  102 bits (253), Expect = 9e-20
 Identities = 53/74 (71%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
 Frame = -1

Query: 309 LSDFPSGN-----DLITKRKNILRPLSPHLPIYKPQLTSTFSIFRRISAVFLTTLVLFSY 145
           LSDF   +     +LI  RKNILRPLSPHLPIYKPQLTSTF I+ RIS  FL TLVLF Y
Sbjct: 43  LSDFVCNDLIRRGNLINNRKNILRPLSPHLPIYKPQLTSTFPIYHRISGAFLATLVLFFY 102

Query: 144 MLYLKIGLICFTYE 103
           +L LKIGLICFTYE
Sbjct: 103 LLCLKIGLICFTYE 116