BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001447
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   497   e-138
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   493   e-137
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4...   491   e-136
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...   489   e-136
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach...   489   e-136

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  497 bits (1280), Expect = e-138
 Identities = 239/253 (94%), Positives = 248/253 (98%), Gaps = 1/253 (0%)
 Frame = -3

Query: 844 GKAVKIAPSASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGESPSYLTGE 668
           G+A+K+APS+SDLLGEGR+TMRKT GRPKPVSS S WYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 667 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 488
           FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 487 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 308
           AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPGG
Sbjct: 135 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGG 194

Query: 307 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 128
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 127 NAWAFATNFVPGK 89
           NAWA+ATNFVPGK
Sbjct: 255 NAWAYATNFVPGK 267


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  493 bits (1268), Expect = e-137
 Identities = 236/253 (93%), Positives = 247/253 (97%), Gaps = 1/253 (0%)
 Frame = -3

Query: 844 GKAVKIAPSASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGESPSYLTGE 668
           G+AVK++P+ASDLLGEGRITMRKT G+PKPVSS S WYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 667 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 488
           FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 134

Query: 487 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 308
           AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGG 194

Query: 307 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 128
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 127 NAWAFATNFVPGK 89
           NAWA+ATNFVPGK
Sbjct: 255 NAWAYATNFVPGK 267


>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
           vinifera] gi|147833686|emb|CAN73057.1| hypothetical
           protein VITISV_007597 [Vitis vinifera]
          Length = 267

 Score =  491 bits (1263), Expect = e-136
 Identities = 237/253 (93%), Positives = 246/253 (97%), Gaps = 1/253 (0%)
 Frame = -3

Query: 844 GKAVKIAPSASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGESPSYLTGE 668
           GKA+K+APSASDLLGEGR+TMRKTGGR KPVSS S WYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15  GKALKLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGE 74

Query: 667 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 488
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 487 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 308
           AGAQIFSEGGLDYLGNP+LVHAQSILAIWA+QVILMGAVEGYRI GGPLGEVVDPLYPGG
Sbjct: 135 AGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVILMGAVEGYRIGGGPLGEVVDPLYPGG 194

Query: 307 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 128
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 127 NAWAFATNFVPGK 89
           NAWA+ATNFVPGK
Sbjct: 255 NAWAYATNFVPGK 267


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score =  489 bits (1260), Expect = e-136
 Identities = 233/253 (92%), Positives = 248/253 (98%), Gaps = 1/253 (0%)
 Frame = -3

Query: 844 GKAVKIAPSASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGESPSYLTGE 668
           GKAVK+AP+AS++ GEGR++MRKT G+PKPVSS S WYGPDRVKYLGPFSGE+PSYLTGE
Sbjct: 14  GKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 73

Query: 667 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 488
           F GDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 74  FAGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWFK 133

Query: 487 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 308
           AG+QIFSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAVEGYR+AGGPLGEVVDPLYPGG
Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGG 193

Query: 307 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 128
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 194 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 253

Query: 127 NAWAFATNFVPGK 89
           NAWAFATNFVPGK
Sbjct: 254 NAWAFATNFVPGK 266


>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
           terminalis]
          Length = 267

 Score =  489 bits (1259), Expect = e-136
 Identities = 235/253 (92%), Positives = 246/253 (97%), Gaps = 1/253 (0%)
 Frame = -3

Query: 844 GKAVKIAPSASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGESPSYLTGE 668
           GKAVK+APSAS+LLG GR++MRKTGGRPKPVSS S WYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 667 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 488
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 487 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 308
           AGAQIFSEGGLDYLGNP+LVHAQSILAIWATQV+LMGAVEGYRIAGGPLGEV+DPLYPGG
Sbjct: 135 AGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVLLMGAVEGYRIAGGPLGEVIDPLYPGG 194

Query: 307 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 128
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 127 NAWAFATNFVPGK 89
           NAWA+ TNFV GK
Sbjct: 255 NAWAYPTNFVSGK 267