BLASTX nr result

ID: Coptis24_contig00001446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001446
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35824.3| unnamed protein product [Vitis vinifera]              171   1e-40
ref|XP_003632758.1| PREDICTED: uncharacterized protein LOC100241...   171   1e-40
ref|XP_004155903.1| PREDICTED: uncharacterized LOC101208469 [Cuc...   152   5e-35
ref|XP_003528651.1| PREDICTED: uncharacterized protein LOC100812...   152   5e-35
ref|XP_002529179.1| transcription factor, putative [Ricinus comm...   149   7e-34

>emb|CBI35824.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  171 bits (433), Expect = 1e-40
 Identities = 95/161 (59%), Positives = 108/161 (67%), Gaps = 11/161 (6%)
 Frame = -1

Query: 452 VEEEKEIQQ-----------THENGRSVLTLQPVTVASIPSPQNTLTLALPIQHPRATAV 306
           +E+++EIQ               NGR       VTVA+ P PQNTLTLALPIQ  R TA 
Sbjct: 1   MEDDEEIQSHPSPDTGSPASPRSNGRIT-----VTVAAAPPPQNTLTLALPIQQAR-TAG 54

Query: 305 AXXXXXXGREDCWSEGATSILIDAWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAK 126
                  GREDCWSEGATS+LIDAWGERYLELSRGNLKQKHW++VADIVSSR+DY+K AK
Sbjct: 55  NGGGGGGGREDCWSEGATSVLIDAWGERYLELSRGNLKQKHWKDVADIVSSREDYTKTAK 114

Query: 125 TDVQCKNRIDTCXXXXXXXXXXXASGQGTSKWIFFHRLDRL 3
           TD+QCKNRIDT            A+G G SKW F+ RLD L
Sbjct: 115 TDIQCKNRIDTVKKKYKLEKAKIAAGGGPSKWPFYQRLDHL 155


>ref|XP_003632758.1| PREDICTED: uncharacterized protein LOC100241240 [Vitis vinifera]
          Length = 364

 Score =  171 bits (433), Expect = 1e-40
 Identities = 95/161 (59%), Positives = 108/161 (67%), Gaps = 11/161 (6%)
 Frame = -1

Query: 452 VEEEKEIQQ-----------THENGRSVLTLQPVTVASIPSPQNTLTLALPIQHPRATAV 306
           +E+++EIQ               NGR       VTVA+ P PQNTLTLALPIQ  R TA 
Sbjct: 1   MEDDEEIQSHPSPDTGSPASPRSNGRIT-----VTVAAAPPPQNTLTLALPIQQAR-TAG 54

Query: 305 AXXXXXXGREDCWSEGATSILIDAWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAK 126
                  GREDCWSEGATS+LIDAWGERYLELSRGNLKQKHW++VADIVSSR+DY+K AK
Sbjct: 55  NGGGGGGGREDCWSEGATSVLIDAWGERYLELSRGNLKQKHWKDVADIVSSREDYTKTAK 114

Query: 125 TDVQCKNRIDTCXXXXXXXXXXXASGQGTSKWIFFHRLDRL 3
           TD+QCKNRIDT            A+G G SKW F+ RLD L
Sbjct: 115 TDIQCKNRIDTVKKKYKLEKAKIAAGGGPSKWPFYQRLDHL 155


>ref|XP_004155903.1| PREDICTED: uncharacterized LOC101208469 [Cucumis sativus]
          Length = 373

 Score =  152 bits (385), Expect = 5e-35
 Identities = 81/139 (58%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
 Frame = -1

Query: 416 NGRSVLTLQPVTVASIP-SPQNTLTLALPIQHPRATAVAXXXXXXGREDCWSEGATSILI 240
           NGR  +T+  V     P S QN +TLALP Q  +           GREDCWSEGATS+LI
Sbjct: 24  NGRITVTVAAVAPPPPPPSSQNMITLALPNQQSKGGG--GGSGGGGREDCWSEGATSVLI 81

Query: 239 DAWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAKTDVQCKNRIDTCXXXXXXXXXX 60
           DAWGERYLELSRGNLKQKHW+EVADIVSSR+DY+K  +TD+QCKNRIDT           
Sbjct: 82  DAWGERYLELSRGNLKQKHWKEVADIVSSREDYTKIPRTDIQCKNRIDTVKKKYKTEKAK 141

Query: 59  XASGQGTSKWIFFHRLDRL 3
             +G G SKW F+ RLD+L
Sbjct: 142 ITAGGGPSKWPFYDRLDQL 160


>ref|XP_003528651.1| PREDICTED: uncharacterized protein LOC100812599 [Glycine max]
          Length = 368

 Score =  152 bits (385), Expect = 5e-35
 Identities = 81/138 (58%), Positives = 94/138 (68%)
 Frame = -1

Query: 416 NGRSVLTLQPVTVASIPSPQNTLTLALPIQHPRATAVAXXXXXXGREDCWSEGATSILID 237
           NGR  +T   V   + P P N+L LALPIQ P            GREDCWSEGAT++LID
Sbjct: 25  NGRITVT---VAAPAPPPPPNSLALALPIQQPAKGNGGGGGGGGGREDCWSEGATAVLID 81

Query: 236 AWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAKTDVQCKNRIDTCXXXXXXXXXXX 57
           AWGERYLELSRGNLKQKHW+EVADIVS R+DY+K  KTD+QCKNRIDT            
Sbjct: 82  AWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKI 141

Query: 56  ASGQGTSKWIFFHRLDRL 3
           A+G  TSKW F+ RL++L
Sbjct: 142 AAG-ATSKWPFYDRLEQL 158


>ref|XP_002529179.1| transcription factor, putative [Ricinus communis]
           gi|223531357|gb|EEF33193.1| transcription factor,
           putative [Ricinus communis]
          Length = 422

 Score =  149 bits (375), Expect = 7e-34
 Identities = 87/180 (48%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
 Frame = -1

Query: 524 NSTHLSVSLPLIRSQASFIHTMDEVEEEKEIQQTHENGRSVLTLQPVTVASIPSPQ---- 357
           NS H S S+PL             ++ + +   +  NGR  +T+    VA     Q    
Sbjct: 86  NSNH-SQSIPL------------HIQSQSQTSPSPSNGRITVTVAAAAVAEPQQQQQQKN 132

Query: 356 NTLTLALPIQH--PRATAVAXXXXXXGREDCWSEGATSILIDAWGERYLELSRGNLKQKH 183
           N   +   IQ   P++          GREDCWSEGAT +LIDAWGERYLELSRGNLKQKH
Sbjct: 133 NLAVIPFQIQQQPPKSNG-------GGREDCWSEGATGVLIDAWGERYLELSRGNLKQKH 185

Query: 182 WREVADIVSSRQDYSKPAKTDVQCKNRIDTCXXXXXXXXXXXASGQGTSKWIFFHRLDRL 3
           W+EVADIVSSR+DY+K AKTD+QCKNRIDT            A+G G SKW FF RLD+L
Sbjct: 186 WKEVADIVSSREDYTKSAKTDIQCKNRIDTVKKKYKLEKAKIAAGAGPSKWPFFQRLDQL 245


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