BLASTX nr result

ID: Coptis24_contig00001439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001439
         (1490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotr...   412   e-113
gb|ADC45390.1| branched chain amino acid transaminase [Cucumis m...   411   e-112
emb|CBI19346.3| unnamed protein product [Vitis vinifera]              411   e-112
ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycin...   407   e-111
ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotr...   406   e-111

>ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2,
            chloroplastic [Vitis vinifera]
            gi|302142142|emb|CBI19345.3| unnamed protein product
            [Vitis vinifera]
          Length = 387

 Score =  412 bits (1060), Expect = e-113
 Identities = 200/278 (71%), Positives = 230/278 (82%)
 Frame = +2

Query: 215  FTTQAVSSLQDMSGPTSPSFDDDYADVNWDELGFSLTPTDYMYTMKCSKDERFSHGELNR 394
            +T++   SLQ +    SP  DD+YADV+WD LGFSL PTDYMY  KCS  + F  G L+R
Sbjct: 30   YTSRTAPSLQPVV-ELSPDSDDEYADVDWDNLGFSLRPTDYMYITKCSGGDSFEEGHLSR 88

Query: 395  YGNIELSPSSGVLNYGQGLFEGLKAYRKVGGGFLLFRPEENARRMQMGADRMCMPSPSIE 574
            YGNIELSPS+GVLNYGQGLFEG KAYR+  G   LFRP++NA RMQ GA+RMCMPSPSI 
Sbjct: 89   YGNIELSPSAGVLNYGQGLFEGTKAYRRENGRLCLFRPDQNAIRMQAGAERMCMPSPSIH 148

Query: 575  QFVVAVKETVLANKCWVPPPGKGSLYVRPLLIGSGPVLGLAPAPDYTFLIYASPVANYFK 754
            QFV AVK+T  ANK W+PPPGKGSLY+RPLL+GSGPVLGL PAP+ TFLIYASPV NYFK
Sbjct: 149  QFVEAVKQTAFANKRWIPPPGKGSLYIRPLLMGSGPVLGLGPAPECTFLIYASPVGNYFK 208

Query: 755  EGLSPLNLVIDDEFHRSTPGGTGNVKTISNYAPVLKPQKRAKSQGFSDVLYLDSLKKKNL 934
            EGL+PLNL IDDE+HR+T GG G VKTI+NY+PVLK   RAKS+GFSDVLYLDS+ KKN+
Sbjct: 209  EGLAPLNLFIDDEYHRATRGGAGGVKTITNYSPVLKALTRAKSRGFSDVLYLDSVYKKNI 268

Query: 935  EEVSSCNIFLVKGNFISTPATDGTILAGITRKSIIDIA 1048
            EEVSSCN+F+VK N ISTPAT GTIL G+TRKSI+DIA
Sbjct: 269  EEVSSCNVFIVKDNVISTPATGGTILEGVTRKSIVDIA 306



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 36/53 (67%), Positives = 39/53 (73%)
 Frame = +3

Query: 1173 AVVVAPVGSITYQGKRFEYKSGAGTVSQKLCSTLTGIQTGVLEDKMGWTIEID 1331
            AV VA VGSITYQGKR EYK G   VSQ+L ST  GIQ G +EDK GW +EID
Sbjct: 335  AVGVAAVGSITYQGKRVEYKMGDQCVSQELFSTYMGIQKGDIEDKKGWILEID 387


>gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo]
          Length = 389

 Score =  411 bits (1057), Expect = e-112
 Identities = 202/275 (73%), Positives = 235/275 (85%)
 Frame = +2

Query: 224  QAVSSLQDMSGPTSPSFDDDYADVNWDELGFSLTPTDYMYTMKCSKDERFSHGELNRYGN 403
            +AVSS+ +    +SP  DD+  D +WD LGF L PTDYMY MKCSKD +F  G+++RYGN
Sbjct: 35   RAVSSMPEPC-QSSPLSDDESCDFDWDSLGFGLMPTDYMYIMKCSKDGKFERGQMSRYGN 93

Query: 404  IELSPSSGVLNYGQGLFEGLKAYRKVGGGFLLFRPEENARRMQMGADRMCMPSPSIEQFV 583
            IELSPS+GVLNYGQGLFEGLKAYRK  GGF LFRP++NA RM  GA+RMCMPSPSIEQFV
Sbjct: 94   IELSPSAGVLNYGQGLFEGLKAYRKKDGGFRLFRPDQNALRMMTGAERMCMPSPSIEQFV 153

Query: 584  VAVKETVLANKCWVPPPGKGSLYVRPLLIGSGPVLGLAPAPDYTFLIYASPVANYFKEGL 763
             AVK+  +AN+ WVPP GKGSLY+RPLLIG+GPVLGLAPAP+YTFLIYASPV NYFKEG 
Sbjct: 154  DAVKQITIANRRWVPPLGKGSLYIRPLLIGTGPVLGLAPAPEYTFLIYASPVRNYFKEGS 213

Query: 764  SPLNLVIDDEFHRSTPGGTGNVKTISNYAPVLKPQKRAKSQGFSDVLYLDSLKKKNLEEV 943
            +PLNL +++EF R++ GGTG VKTISNYAPVLK   RAKS+GFSDVLYLDS+ K++LEEV
Sbjct: 214  APLNLYVENEFVRASRGGTGGVKTISNYAPVLKAITRAKSRGFSDVLYLDSVNKRDLEEV 273

Query: 944  SSCNIFLVKGNFISTPATDGTILAGITRKSIIDIA 1048
            SSCNIFLVKGN ISTPAT+GTIL G+TRKSII+IA
Sbjct: 274  SSCNIFLVKGNVISTPATNGTILPGVTRKSIIEIA 308



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = +3

Query: 1173 AVVVAPVGSITYQGKRFEYKSGAGTVSQKLCSTLTGIQTGVLEDKMGWTIEI 1328
            AV VAPVGSIT   +R EY++GA T  Q+L STL GIQTG +EDKMGWT+EI
Sbjct: 337  AVGVAPVGSITCMDRRIEYQTGADTTCQELYSTLVGIQTGTIEDKMGWTVEI 388


>emb|CBI19346.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  411 bits (1057), Expect = e-112
 Identities = 200/278 (71%), Positives = 230/278 (82%)
 Frame = +2

Query: 215  FTTQAVSSLQDMSGPTSPSFDDDYADVNWDELGFSLTPTDYMYTMKCSKDERFSHGELNR 394
            FT++   SLQ +  P SP  DD+YADV+WD LGF L PTDYMYT KCS+   F  G L+R
Sbjct: 30   FTSRTAPSLQPLVEP-SPYSDDEYADVDWDNLGFGLIPTDYMYTTKCSEGGNFEEGHLSR 88

Query: 395  YGNIELSPSSGVLNYGQGLFEGLKAYRKVGGGFLLFRPEENARRMQMGADRMCMPSPSIE 574
            YGNIELSPS+GVLNYGQGLFEG KAYR+  G   LFRP++NA RMQ+GA+RMCMPSPSI 
Sbjct: 89   YGNIELSPSAGVLNYGQGLFEGTKAYRRENGRLCLFRPDQNAIRMQVGAERMCMPSPSIH 148

Query: 575  QFVVAVKETVLANKCWVPPPGKGSLYVRPLLIGSGPVLGLAPAPDYTFLIYASPVANYFK 754
             FV AVK+T LANK W+PPPGKGSLY+RPLL+GSGPVLGL PAP+ TFLIYASPV NYFK
Sbjct: 149  HFVEAVKQTALANKRWIPPPGKGSLYIRPLLMGSGPVLGLGPAPECTFLIYASPVGNYFK 208

Query: 755  EGLSPLNLVIDDEFHRSTPGGTGNVKTISNYAPVLKPQKRAKSQGFSDVLYLDSLKKKNL 934
            +  +PLNL IDDE+HR+T GG G VK I+NY+PVLK Q RAKS+GFSDVL+LDS+ KKN+
Sbjct: 209  QVSAPLNLFIDDEYHRATRGGAGGVKAITNYSPVLKAQSRAKSRGFSDVLFLDSVNKKNI 268

Query: 935  EEVSSCNIFLVKGNFISTPATDGTILAGITRKSIIDIA 1048
            EEVSSCNIF+VK N ISTPAT GTIL G+TRKSIIDIA
Sbjct: 269  EEVSSCNIFIVKDNVISTPATGGTILEGVTRKSIIDIA 306



 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 37/53 (69%), Positives = 40/53 (75%)
 Frame = +3

Query: 1173 AVVVAPVGSITYQGKRFEYKSGAGTVSQKLCSTLTGIQTGVLEDKMGWTIEID 1331
            AV VA VGSITYQGKR EYKSG   VSQ+L S  TGIQ G +EDK GW +EID
Sbjct: 335  AVGVAAVGSITYQGKRVEYKSGDRCVSQELLSMYTGIQKGHIEDKKGWILEID 387


>ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycine max]
            gi|255635824|gb|ACU18260.1| unknown [Glycine max]
          Length = 412

 Score =  407 bits (1046), Expect = e-111
 Identities = 197/277 (71%), Positives = 232/277 (83%), Gaps = 2/277 (0%)
 Frame = +2

Query: 224  QAVSSLQDMSGPTSPSFDD--DYADVNWDELGFSLTPTDYMYTMKCSKDERFSHGELNRY 397
            +A S L+  +  +S S+ +  + AD+ WD LGF L PTDYMY+MKC++   FS GEL R+
Sbjct: 55   EAASPLRPSATLSSDSYRETIELADIEWDNLGFGLQPTDYMYSMKCTRGGTFSKGELQRF 114

Query: 398  GNIELSPSSGVLNYGQGLFEGLKAYRKVGGGFLLFRPEENARRMQMGADRMCMPSPSIEQ 577
            GNIEL+PS+GVLNYGQGLFEGLKAYRK  G  LLFRPEEN  RMQ+GA+RMCMPSP++EQ
Sbjct: 115  GNIELNPSAGVLNYGQGLFEGLKAYRKQDGSILLFRPEENGLRMQIGAERMCMPSPTVEQ 174

Query: 578  FVVAVKETVLANKCWVPPPGKGSLYVRPLLIGSGPVLGLAPAPDYTFLIYASPVANYFKE 757
            FV AVKETVLANK WVPP GKGSLY+RPLL+GSGPVLGLAPAP+YTFLIY SPV NYFKE
Sbjct: 175  FVEAVKETVLANKRWVPPAGKGSLYIRPLLMGSGPVLGLAPAPEYTFLIYVSPVGNYFKE 234

Query: 758  GLSPLNLVIDDEFHRSTPGGTGNVKTISNYAPVLKPQKRAKSQGFSDVLYLDSLKKKNLE 937
            GL+P+NL++++E HR+TPGGTG VKTI NYA VLK Q  AK++G+SDVLYLD + K+ LE
Sbjct: 235  GLAPINLIVENELHRATPGGTGGVKTIGNYAAVLKAQSEAKAKGYSDVLYLDCVHKRYLE 294

Query: 938  EVSSCNIFLVKGNFISTPATDGTILAGITRKSIIDIA 1048
            EVSSCNIF+VKGN ISTPA  GTIL GITRKSIID+A
Sbjct: 295  EVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVA 331



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +3

Query: 1173 AVVVAPVGSITYQGKRFEYKSGAGTVSQKLCSTLTGIQTGVLEDKMGWTIEI 1328
            AVVV+PVGSITY  KR  Y  G G V+Q+L + LT +Q G+ ED+M WT+E+
Sbjct: 360  AVVVSPVGSITYLDKRVAYGDGIGVVAQQLYTVLTRLQMGLTEDEMNWTVEL 411


>ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2,
            chloroplastic-like [Cucumis sativus]
            gi|449494398|ref|XP_004159536.1| PREDICTED:
            branched-chain-amino-acid aminotransferase 2,
            chloroplastic-like [Cucumis sativus]
          Length = 390

 Score =  406 bits (1044), Expect = e-111
 Identities = 198/275 (72%), Positives = 234/275 (85%)
 Frame = +2

Query: 224  QAVSSLQDMSGPTSPSFDDDYADVNWDELGFSLTPTDYMYTMKCSKDERFSHGELNRYGN 403
            +AVSS+ +    +SP  DD+  D +WD LGF L PTDYMY MKCSKD  F  G+++R+GN
Sbjct: 36   RAVSSMPEPC-QSSPFSDDESCDFDWDSLGFGLMPTDYMYIMKCSKDGNFERGQMSRFGN 94

Query: 404  IELSPSSGVLNYGQGLFEGLKAYRKVGGGFLLFRPEENARRMQMGADRMCMPSPSIEQFV 583
            IELSPS+GVLNYGQGLFEGLKAYRK  GGF LFRP++NA RM  GA+RMCMPSPSIEQF+
Sbjct: 95   IELSPSAGVLNYGQGLFEGLKAYRKKDGGFRLFRPDQNALRMMTGAERMCMPSPSIEQFI 154

Query: 584  VAVKETVLANKCWVPPPGKGSLYVRPLLIGSGPVLGLAPAPDYTFLIYASPVANYFKEGL 763
             AVK+  +AN+ WVPP GKGSLY+RPLLIG+GPVLGLAPAP+YTFLIYASPV NYFKEG 
Sbjct: 155  DAVKQITIANRRWVPPLGKGSLYIRPLLIGTGPVLGLAPAPEYTFLIYASPVCNYFKEGS 214

Query: 764  SPLNLVIDDEFHRSTPGGTGNVKTISNYAPVLKPQKRAKSQGFSDVLYLDSLKKKNLEEV 943
            +PLNL +++EF R++ GGTG VKTISNYAPVLK   +AK++GFSDVLYLDS+ K++LEEV
Sbjct: 215  APLNLYVENEFVRASRGGTGGVKTISNYAPVLKAITQAKNRGFSDVLYLDSVNKRDLEEV 274

Query: 944  SSCNIFLVKGNFISTPATDGTILAGITRKSIIDIA 1048
            SSCNIFLVKGN ISTPAT+GTIL G+TRKSII+IA
Sbjct: 275  SSCNIFLVKGNVISTPATNGTILPGVTRKSIIEIA 309



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = +3

Query: 1173 AVVVAPVGSITYQGKRFEYKSGAGTVSQKLCSTLTGIQTGVLEDKMGWTIEI 1328
            AV VAPVGSIT   +R EY++GA T  Q+L STL GIQTG +EDKMGWT+EI
Sbjct: 338  AVGVAPVGSITCMDRRIEYRTGANTTCQELYSTLVGIQTGTIEDKMGWTVEI 389


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