BLASTX nr result

ID: Coptis24_contig00001423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001423
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vi...   505   e-152
emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]   504   e-151
ref|XP_002305820.1| predicted protein [Populus trichocarpa] gi|2...   485   e-144
emb|CBI33642.3| unnamed protein product [Vitis vinifera]              505   e-140
ref|XP_003552724.1| PREDICTED: mannose-6-phosphate isomerase-lik...   481   e-140

>ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vitis vinifera]
          Length = 420

 Score =  505 bits (1300), Expect(2) = e-152
 Identities = 249/350 (71%), Positives = 295/350 (84%)
 Frame = +1

Query: 376  GESVTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSVAKALSIQAHPDKELARALHDSH 555
            G+S TL SWISENP+VLG +V E+WG++LPFLFKVLSVAKALSIQAHPDKELAR LH   
Sbjct: 70   GKSRTLKSWISENPNVLGDEVVEKWGSDLPFLFKVLSVAKALSIQAHPDKELARTLHKLQ 129

Query: 556  PSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEH 735
            P +YKD NHKPEMALA+TEF+ALCGFVSL ELK VL  VPEIVE+VG+ DA+QV+ + E 
Sbjct: 130  PHVYKDDNHKPEMALAITEFQALCGFVSLGELKIVLKDVPEIVEVVGSADANQVLDVSEE 189

Query: 736  AVVERVKTVLRSIFTQLMSAEKDTVYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYP 915
               E+VK+VL+SIFTQLMSA K+ V ++++KLK RL ME +VRQLT+KE+LVLRLEKQYP
Sbjct: 190  DGKEKVKSVLQSIFTQLMSANKEMVSKIITKLKIRLQMESQVRQLTDKEQLVLRLEKQYP 249

Query: 916  NDIGVAAAFFLNYVKLNPGEALYLGANEPHAYLSGECMECMATSDNVVRAGLTPKLRDVP 1095
             D+GV +AFF NYVKLNPGEALYLGANEPHAYL GEC+ECMATSDNVVRAGLTPK RDV 
Sbjct: 250  GDVGVISAFFFNYVKLNPGEALYLGANEPHAYLYGECIECMATSDNVVRAGLTPKHRDVQ 309

Query: 1096 TLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQLATTVFPAISGPSIFI 1275
            TLCSMLTYKQGFPEILQG+PL+PYT+RY PPFDEFEVDCC LP+ A+ +FPA+ GPSIF+
Sbjct: 310  TLCSMLTYKQGFPEILQGVPLNPYTRRYLPPFDEFEVDCCSLPKGASAMFPAVEGPSIFV 369

Query: 1276 VMCGQGTMQMESSNNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSK 1425
            V  G+GT  +  +  E++ EG V+F PADT+I+    + L LYRAGVNS+
Sbjct: 370  VTVGEGTAHV-GACEEQVGEGDVLFAPADTEISFGTSTQLNLYRAGVNSR 418



 Score = 60.8 bits (146), Expect(2) = e-152
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = +3

Query: 195 EKVVESKKKLLPQRLRCSVQNYDWGKVGKESHVARLFSLNSGLDIEV 335
           E  V  K+K L +RLRCSVQNYDWG++G ES VARLFS+NSG ++++
Sbjct: 2   EVQVPDKQKRL-RRLRCSVQNYDWGRLGSESTVARLFSMNSGAEVQL 47


>emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]
          Length = 455

 Score =  504 bits (1298), Expect(2) = e-151
 Identities = 248/350 (70%), Positives = 295/350 (84%)
 Frame = +1

Query: 376  GESVTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSVAKALSIQAHPDKELARALHDSH 555
            G+S TL SWISENP+VLG +V E+WG++LPFLFKVLSVAKALSIQAHPDKELAR LH   
Sbjct: 105  GKSRTLKSWISENPNVLGDEVVEKWGSDLPFLFKVLSVAKALSIQAHPDKELARTLHKLQ 164

Query: 556  PSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEH 735
            P +YKD NHKPEMALA+TEF+ALCGFVSL ELK VL  VPEIVE+VG+ DA+QV+ + E 
Sbjct: 165  PHVYKDDNHKPEMALAITEFQALCGFVSLXELKIVLKDVPEIVEVVGSADANQVLDVSEE 224

Query: 736  AVVERVKTVLRSIFTQLMSAEKDTVYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYP 915
               E+VK+VL+SIFTQLMSA K+ V ++++KLK RL ME ++RQLT+KE+LVLRLEKQYP
Sbjct: 225  DGKEKVKSVLQSIFTQLMSANKEMVSKIITKLKIRLQMESQMRQLTDKEQLVLRLEKQYP 284

Query: 916  NDIGVAAAFFLNYVKLNPGEALYLGANEPHAYLSGECMECMATSDNVVRAGLTPKLRDVP 1095
             D+GV +AFF NYVKLNPGEALYLGANEPHAYL GEC+ECMATSDNVVRAGLTPK RDV 
Sbjct: 285  GDVGVISAFFFNYVKLNPGEALYLGANEPHAYLYGECIECMATSDNVVRAGLTPKHRDVQ 344

Query: 1096 TLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQLATTVFPAISGPSIFI 1275
            TLCSMLTYKQGFPEILQG+PL+PYT+RY PPFDEFEVDCC LP+ A+ +FPA+ GPSIF+
Sbjct: 345  TLCSMLTYKQGFPEILQGVPLNPYTRRYLPPFDEFEVDCCSLPKGASAMFPAVEGPSIFV 404

Query: 1276 VMCGQGTMQMESSNNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSK 1425
            V  G+GT  +  +  E++ EG V+F PADT+I+    + L LYRAGVNS+
Sbjct: 405  VTVGEGTAHV-GACEEQVGEGDVLFAPADTEISFGTSTQLNLYRAGVNSR 453



 Score = 60.8 bits (146), Expect(2) = e-151
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = +3

Query: 195 EKVVESKKKLLPQRLRCSVQNYDWGKVGKESHVARLFSLNSGLDIEV 335
           E  V  K+K L +RLRCSVQNYDWG++G ES VARLFS+NSG ++++
Sbjct: 37  EVQVPDKQKRL-RRLRCSVQNYDWGRLGSESTVARLFSMNSGAEVQL 82


>ref|XP_002305820.1| predicted protein [Populus trichocarpa] gi|222848784|gb|EEE86331.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  485 bits (1249), Expect(2) = e-144
 Identities = 241/349 (69%), Positives = 286/349 (81%)
 Frame = +1

Query: 382  SVTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSVAKALSIQAHPDKELARALHDSHPS 561
            S+ L  WI +NP+VLG  V ++WG +LPFLFKVLSVAKALSIQAHPDKELA+ LH   P+
Sbjct: 87   SMGLKEWILKNPNVLGDGVLDKWGCDLPFLFKVLSVAKALSIQAHPDKELAKVLHKLQPN 146

Query: 562  IYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEHAV 741
             YKD NHKPEMALA+TEFEALCGF+S+ ELK VL  VPEIVE+VG+ +A+QV+ + E   
Sbjct: 147  RYKDDNHKPEMALAITEFEALCGFISIGELKGVLRDVPEIVEVVGSAEANQVLQIHEQDH 206

Query: 742  VERVKTVLRSIFTQLMSAEKDTVYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYPND 921
             E+VK+VLRS FTQLMSA ++   E +SKLK RL ME K+RQLT KE+LVL+LEKQYP D
Sbjct: 207  EEKVKSVLRSAFTQLMSASQEITAEAISKLKSRLYMESKIRQLTGKEQLVLQLEKQYPAD 266

Query: 922  IGVAAAFFLNYVKLNPGEALYLGANEPHAYLSGECMECMATSDNVVRAGLTPKLRDVPTL 1101
            IGV +AFFLNYVKLN GEALYLGANEPHAYL GEC+ECMATSDNVVRAGLTPKLRD+ TL
Sbjct: 267  IGVISAFFLNYVKLNSGEALYLGANEPHAYLYGECIECMATSDNVVRAGLTPKLRDIQTL 326

Query: 1102 CSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQLATTVFPAISGPSIFIVM 1281
            CSMLTYKQGFPEIL+G PL PY  RY PPFDEFEVD C+LP+ A+TVFPAI GPSIF+VM
Sbjct: 327  CSMLTYKQGFPEILKGFPLSPYITRYLPPFDEFEVDRCILPRGASTVFPAIPGPSIFLVM 386

Query: 1282 CGQGTMQMESSNNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSKF 1428
             G G M    S+ + + EG V+F PA+++I+++  S+L LYRAGVNS+F
Sbjct: 387  VGDGAM-CTGSSKDVVMEGDVLFAPANSEISVSTASELHLYRAGVNSRF 434



 Score = 55.5 bits (132), Expect(2) = e-144
 Identities = 27/36 (75%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
 Frame = +3

Query: 231 QRLRCSVQNYDWGKVGKE-SHVARLFSLNSGLDIEV 335
           +RLRCSVQNYDWGK G E S VARL+ LNSG DIE+
Sbjct: 16  KRLRCSVQNYDWGKKGTEGSEVARLYELNSGSDIEL 51


>emb|CBI33642.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  505 bits (1300), Expect = e-140
 Identities = 249/350 (71%), Positives = 295/350 (84%)
 Frame = +1

Query: 376  GESVTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSVAKALSIQAHPDKELARALHDSH 555
            G+S TL SWISENP+VLG +V E+WG++LPFLFKVLSVAKALSIQAHPDKELAR LH   
Sbjct: 15   GKSRTLKSWISENPNVLGDEVVEKWGSDLPFLFKVLSVAKALSIQAHPDKELARTLHKLQ 74

Query: 556  PSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEH 735
            P +YKD NHKPEMALA+TEF+ALCGFVSL ELK VL  VPEIVE+VG+ DA+QV+ + E 
Sbjct: 75   PHVYKDDNHKPEMALAITEFQALCGFVSLGELKIVLKDVPEIVEVVGSADANQVLDVSEE 134

Query: 736  AVVERVKTVLRSIFTQLMSAEKDTVYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYP 915
               E+VK+VL+SIFTQLMSA K+ V ++++KLK RL ME +VRQLT+KE+LVLRLEKQYP
Sbjct: 135  DGKEKVKSVLQSIFTQLMSANKEMVSKIITKLKIRLQMESQVRQLTDKEQLVLRLEKQYP 194

Query: 916  NDIGVAAAFFLNYVKLNPGEALYLGANEPHAYLSGECMECMATSDNVVRAGLTPKLRDVP 1095
             D+GV +AFF NYVKLNPGEALYLGANEPHAYL GEC+ECMATSDNVVRAGLTPK RDV 
Sbjct: 195  GDVGVISAFFFNYVKLNPGEALYLGANEPHAYLYGECIECMATSDNVVRAGLTPKHRDVQ 254

Query: 1096 TLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQLATTVFPAISGPSIFI 1275
            TLCSMLTYKQGFPEILQG+PL+PYT+RY PPFDEFEVDCC LP+ A+ +FPA+ GPSIF+
Sbjct: 255  TLCSMLTYKQGFPEILQGVPLNPYTRRYLPPFDEFEVDCCSLPKGASAMFPAVEGPSIFV 314

Query: 1276 VMCGQGTMQMESSNNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSK 1425
            V  G+GT  +  +  E++ EG V+F PADT+I+    + L LYRAGVNS+
Sbjct: 315  VTVGEGTAHV-GACEEQVGEGDVLFAPADTEISFGTSTQLNLYRAGVNSR 363


>ref|XP_003552724.1| PREDICTED: mannose-6-phosphate isomerase-like [Glycine max]
          Length = 421

 Score =  481 bits (1239), Expect(2) = e-140
 Identities = 234/348 (67%), Positives = 282/348 (81%)
 Frame = +1

Query: 385  VTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSVAKALSIQAHPDKELARALHDSHPSI 564
            V+L +WISENP VLG KV  +WG++LPFLFKVLSV KALSIQAHPDKELAR LH  HP +
Sbjct: 70   VSLKAWISENPDVLGHKVLHKWGSDLPFLFKVLSVGKALSIQAHPDKELARTLHKLHPDL 129

Query: 565  YKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEHAVV 744
            YKDGNHKPEMALALT FEALCGF++L+ELK VL +VPEIVELVG  + + V+  ++    
Sbjct: 130  YKDGNHKPEMALALTNFEALCGFITLKELKGVLHTVPEIVELVGATNTNLVLQTNDQDGE 189

Query: 745  ERVKTVLRSIFTQLMSAEKDTVYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYPNDI 924
            E+VK VL+++FT LMSA KD V + V++LK RL  E +VRQLT+KE+LVLRLEKQYP D+
Sbjct: 190  EKVKPVLQAVFTDLMSASKDRVTDAVNRLKSRLLKESEVRQLTDKEQLVLRLEKQYPADV 249

Query: 925  GVAAAFFLNYVKLNPGEALYLGANEPHAYLSGECMECMATSDNVVRAGLTPKLRDVPTLC 1104
            GV AAFFLN+VKLNPGEAL+LGANEPHAYLSGEC+ECMATSDNVVRAGLTPK RDV TLC
Sbjct: 250  GVIAAFFLNHVKLNPGEALFLGANEPHAYLSGECVECMATSDNVVRAGLTPKHRDVQTLC 309

Query: 1105 SMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQLATTVFPAISGPSIFIVMC 1284
            SMLTYKQG PEIL+G+ ++PY  +Y+PPF+EFE+D C+LPQ  T VFPA+ GPSIF+V  
Sbjct: 310  SMLTYKQGSPEILRGVSVNPYVNKYTPPFEEFEIDRCILPQGETVVFPAVPGPSIFLVTV 369

Query: 1285 GQGTMQMESSNNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSKF 1428
            G+GTM         + EG V+F  A+T+I++   S+L LYR GVNSKF
Sbjct: 370  GEGTMNTGLPKGHVVTEGDVLFAAANTEISVTSASELNLYRTGVNSKF 417



 Score = 45.1 bits (105), Expect(2) = e-140
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = +3

Query: 231 QRLRCSVQNYDWGKVGKESHVARLFSLNS 317
           QRL CSV+NYDWG  G+ S VARL +LNS
Sbjct: 7   QRLHCSVKNYDWGLPGRVSEVARLHALNS 35


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