BLASTX nr result

ID: Coptis24_contig00001397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001397
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276108.1| PREDICTED: uncharacterized protein LOC100250...   102   3e-20
ref|XP_003552725.1| PREDICTED: uncharacterized protein LOC100806...    95   8e-18
gb|AFK41935.1| unknown [Lotus japonicus]                               86   3e-15
ref|XP_002320975.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002515290.1| conserved hypothetical protein [Ricinus comm...    85   7e-15

>ref|XP_002276108.1| PREDICTED: uncharacterized protein LOC100250421 [Vitis vinifera]
          Length = 89

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/75 (70%), Positives = 59/75 (78%)
 Frame = -2

Query: 480 MENETNIVGPPRSHVKATFCLNSEVYSVNASSGTISEQLVSVKEESVCILKDFITKHNVP 301
           ME +T    PP+  VKAT  L  E YSVNAS GTISEQLVSVKEES+ ILK+FITKHNVP
Sbjct: 1   MEAQTEGGSPPKPRVKATLNLGPETYSVNASKGTISEQLVSVKEESMGILKEFITKHNVP 60

Query: 300 NDVPDELVEASEDDE 256
           NDVPDE +EAS +DE
Sbjct: 61  NDVPDEPLEASSEDE 75


>ref|XP_003552725.1| PREDICTED: uncharacterized protein LOC100806261 [Glycine max]
          Length = 88

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -2

Query: 447 RSHVKATFCLNSEVYSVNASSGTISEQLVSVKEESVCILKDFITKHNVPNDVPDELVEAS 268
           R H+KATF L SE YSV A+ G++SEQLVS+KEES+ ILKDFITKHNVP+DVPDE +EAS
Sbjct: 9   RPHLKATFRLGSESYSVQANKGSLSEQLVSLKEESMTILKDFITKHNVPHDVPDEPLEAS 68

Query: 267 EDDE 256
            DD+
Sbjct: 69  SDDD 72


>gb|AFK41935.1| unknown [Lotus japonicus]
          Length = 91

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = -2

Query: 480 MENETNIVGPPRSHVKATFCLNSEVYSVNASSGT-ISEQLVSVKEESVCILKDFITKHNV 304
           ME E       +S VKAT  L +E YSV A+ G+ +SEQLVS+KEES+ +LKDFITKHNV
Sbjct: 1   METEPCDAMHSKSQVKATLRLGTESYSVQATKGSSLSEQLVSLKEESMAVLKDFITKHNV 60

Query: 303 PNDVPDELVEASEDDE 256
           P DVPDE +EAS DD+
Sbjct: 61  PQDVPDESLEASSDDD 76


>ref|XP_002320975.1| predicted protein [Populus trichocarpa] gi|222861748|gb|EEE99290.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 42/63 (66%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
 Frame = -2

Query: 438 VKATFCLNSEVYSVNASSG-TISEQLVSVKEESVCILKDFITKHNVPNDVPDELVEASED 262
           VKAT  L SE+Y+VN+ +G T+SEQLVS+KE+S+ ILK+FITKHNVP+DVPDE+ E+S +
Sbjct: 15  VKATLKLGSELYAVNSCNGNTVSEQLVSMKEQSMSILKEFITKHNVPHDVPDEIAESSSE 74

Query: 261 DEV 253
           DEV
Sbjct: 75  DEV 77


>ref|XP_002515290.1| conserved hypothetical protein [Ricinus communis]
           gi|223545770|gb|EEF47274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 44/76 (57%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = -2

Query: 480 MENETNIVGPPRSHVKATFCLNSEVYSVNASSG-TISEQLVSVKEESVCILKDFITKHNV 304
           ME + +      S VKA   L SE+YS++A  G TISE+LVS+KE+S+ +LK+FITKHN 
Sbjct: 1   MEAQAHDAVTQASRVKAIIKLGSEIYSIDADKGSTISEELVSLKEKSMTVLKEFITKHNA 60

Query: 303 PNDVPDELVEASEDDE 256
           P+DVPDELVE S DDE
Sbjct: 61  PSDVPDELVEMSSDDE 76


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