BLASTX nr result
ID: Coptis24_contig00001383
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001383
(2465 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002882196.1| hypothetical protein ARALYDRAFT_317076 [Arab... 359 2e-96
ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-... 348 5e-93
ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-... 348 5e-93
ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [... 340 1e-90
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-... 339 2e-90
>ref|XP_002882196.1| hypothetical protein ARALYDRAFT_317076 [Arabidopsis lyrata subsp.
lyrata] gi|297328036|gb|EFH58455.1| hypothetical protein
ARALYDRAFT_317076 [Arabidopsis lyrata subsp. lyrata]
Length = 725
Score = 359 bits (922), Expect = 2e-96
Identities = 226/516 (43%), Positives = 286/516 (55%), Gaps = 19/516 (3%)
Frame = +1
Query: 658 THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPV--- 828
THRLAIVNMDW V A DLYVVL+SFLPK G++LSV VYPSEFGL+RM+EE + GPV
Sbjct: 206 THRLAIVNMDWRHVSAKDLYVVLNSFLPKDGRILSVAVYPSEFGLERMKEEEIHGPVIDG 265
Query: 829 --GLFXXXXXXXXXXXXXXIDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 1002
+ +KLRAYE+SRL+YY AVAECDSSATADH+YK+CDG+EF
Sbjct: 266 DKKNEGSDDEDEEEEEDEDVINQKLRAYEISRLKYYFAVAECDSSATADHLYKSCDGIEF 325
Query: 1003 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1179
ERSSN LDLRF+PD+M+F+ PRD+A+E P Y +DF+++ALQ S + L+WDEDEP+R
Sbjct: 326 ERSSNKLDLRFIPDSMEFKHPPRDIASEAPAGYEGLDFQSRALQLSKVNLSWDEDEPHRI 385
Query: 1180 KALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEG--QSGENLGK-LEKY 1350
K L + F +QL L++ F+A+DES S E D + EG QS K +KY
Sbjct: 386 KTLNQKFNPEQLANLEMKEFLASDESDS-------DDEDDDSKEGINQSKRKEDKRKDKY 438
Query: 1351 RALIQA--XXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKE 1524
RALI++ MEVTFNTGLED+SK IL KKKD KSE+VWE LR+R+E
Sbjct: 439 RALIESEDVDSDKDMEEEDGQDMEVTFNTGLEDLSKEIL-KKKDSKSESVWETYLRQRRE 497
Query: 1525 KKIARKNRYLXXXXXXXXXXXXXXQ--------PDDFFVEEPXXXXXXXXXXXXXXXXXX 1680
KK ARKN+ DDFF+EEP
Sbjct: 498 KKRARKNKQNDDSSSPDDDDDYKIDRKAVKDDGDDDFFMEEPPLKKKKKEGKTKKKGLEE 557
Query: 1681 XXXXXXXXXXXXXXXXXXXXXXXXPTMRGYXXXXXXXXXXXXXXXXXXXXXDPAEDKLPS 1860
++GY D +E+K+P+
Sbjct: 558 EVAAEEKSRAELELLLADENAGDGNGLKGY----------NIKRKGKKGKTDISEEKIPA 607
Query: 1861 VACDDPRFSALFSSPLFALDPTDAQYKRSAAYARQLAQQKGVGEEILDKEQKKTPKEILL 2040
DDPRFSALFSSP +ALDPTD Q+KRSA YARQLA ++ E+ E K PKE
Sbjct: 608 ADLDDPRFSALFSSPFYALDPTDPQFKRSATYARQLAAKQ--KEDPKSHEDVKAPKE--- 662
Query: 2041 QSDDTSKRDEPKQSDSMSREKVNPELSSMIRSLKRK 2148
+ E ++ +K EL+S ++SLK K
Sbjct: 663 -------KHELNSDGNLGSKKERHELTSTVKSLKMK 691
Score = 82.8 bits (203), Expect = 4e-13
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +1
Query: 175 EAKTSLQDNNIKNDGRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFAT 354
EAK S + ++G ++I+DPRFS+ H DP+F+ + + SKV IDSRF RMF+DK F T
Sbjct: 15 EAKGS---GGVADEGNEMIKDPRFSSAHTDPKFRRIRRRDSKVAIDSRFQRMFNDKRFTT 71
Query: 355 SSSHTDKRGK-RKDKNAVNPLRHYYKI 432
+S+ DKRGK R+ + + LR +Y+I
Sbjct: 72 ASAPVDKRGKRRRGGSGKDSLREFYRI 98
>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
Length = 735
Score = 348 bits (892), Expect = 5e-93
Identities = 221/516 (42%), Positives = 283/516 (54%), Gaps = 9/516 (1%)
Frame = +1
Query: 658 THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 837
THRLA+VN+DW V+AVDLYVVLSSFLPKGGQ+LSV VYPSEFGL+RM+EE + GPVGLF
Sbjct: 206 THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 265
Query: 838 XXXXXXXXXXXXXX-----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 1002
+D EKLRAYE+SRLRYY+AV ECDS ATAD++YK CDG+EF
Sbjct: 266 DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 325
Query: 1003 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1179
ERSSN+LDLRF+PD+M+FE PRD ATE P +Y V++F T ALQ S I L+WDEDEP R
Sbjct: 326 ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 385
Query: 1180 KALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRAL 1359
KAL+R F QL +L++ F+A+DES S + GE Q + K +KYRAL
Sbjct: 386 KALKRKFNADQLADLELKEFLASDESES--------DDESDDGEDQVDKKRKKGDKYRAL 437
Query: 1360 IQAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIAR 1539
+Q+ MEVTFNTGLEDISK ILE KKDKKSET+WEA LRK+ EK++A
Sbjct: 438 LQS---DEDGEQDGGQDMEVTFNTGLEDISKRILE-KKDKKSETLWEAHLRKKHEKRMAS 493
Query: 1540 KNRYLXXXXXXXXXXXXXXQP-DDFFVEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1716
+N+ + DDFFVEEP
Sbjct: 494 RNKSANSSDDESSDTDREVEEVDDFFVEEPPVKESGKDRTKNIKGREHVGEDGAAEASRA 553
Query: 1717 XXXXXXXXXXXXPT-MRGYXXXXXXXXXXXXXXXXXXXXXDPAEDKLPSVACDDPRFSAL 1893
T ++GY D + + S + P F+
Sbjct: 554 ELELLLADDDGVDTSIKGYNLKHKKKKGKEDITEDKIPTVDYNDPRF-SALFNSPLFALD 612
Query: 1894 FSSPLFALDPTDAQYKRSAAYARQLAQQKGVG-EEILDKEQKKTPKEILLQSDDTSKRDE 2070
+ P F A Y R A L Q KG G + + K + K+ +D SK D
Sbjct: 613 PTDPQF---KRSAAYVRQVA----LKQPKGDGYQPTKSRHGKSSTKQPAAPGEDESKGDV 665
Query: 2071 PKQSDSMSREKVNPELSSMIRSLKRKTQQYQATASG 2178
+++ S +K ELSS+++S+K K++Q Q + G
Sbjct: 666 SVKTEGDSSKKEKYELSSLVKSIKMKSKQLQLPSGG 701
Score = 99.4 bits (246), Expect = 4e-18
Identities = 47/81 (58%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = +1
Query: 205 IKNDG--RKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHTDKR 378
I ND +K+I D RFS+VH DPRFQN PKH++KV IDSRFN+MF DK F+++S+ DKR
Sbjct: 31 INNDQSKKKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKR 90
Query: 379 GKRKDKNAVNPLRHYYKIDQQ 441
G+ K + NPLR YYKI+++
Sbjct: 91 GRVKKGKSENPLRRYYKIEEK 111
>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
Length = 740
Score = 348 bits (892), Expect = 5e-93
Identities = 221/516 (42%), Positives = 283/516 (54%), Gaps = 9/516 (1%)
Frame = +1
Query: 658 THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 837
THRLA+VN+DW V+AVDLYVVLSSFLPKGGQ+LSV VYPSEFGL+RM+EE + GPVGLF
Sbjct: 211 THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 270
Query: 838 XXXXXXXXXXXXXX-----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 1002
+D EKLRAYE+SRLRYY+AV ECDS ATAD++YK CDG+EF
Sbjct: 271 DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 330
Query: 1003 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1179
ERSSN+LDLRF+PD+M+FE PRD ATE P +Y V++F T ALQ S I L+WDEDEP R
Sbjct: 331 ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 390
Query: 1180 KALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRAL 1359
KAL+R F QL +L++ F+A+DES S + GE Q + K +KYRAL
Sbjct: 391 KALKRKFNADQLADLELKEFLASDESES--------DDESDDGEDQVDKKRKKGDKYRAL 442
Query: 1360 IQAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIAR 1539
+Q+ MEVTFNTGLEDISK ILE KKDKKSET+WEA LRK+ EK++A
Sbjct: 443 LQS---DEDGEQDGGQDMEVTFNTGLEDISKRILE-KKDKKSETLWEAHLRKKHEKRMAS 498
Query: 1540 KNRYLXXXXXXXXXXXXXXQP-DDFFVEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1716
+N+ + DDFFVEEP
Sbjct: 499 RNKSADSSDDESSDTDREVEEVDDFFVEEPPVKESGKDRTKNIKGREHVGEDGAAEASRA 558
Query: 1717 XXXXXXXXXXXXPT-MRGYXXXXXXXXXXXXXXXXXXXXXDPAEDKLPSVACDDPRFSAL 1893
T ++GY D + + S + P F+
Sbjct: 559 ELELLLADDDGVDTSIKGYNLKHKKKKGKEDITEDKIPTVDYNDPRF-SALFNSPLFALD 617
Query: 1894 FSSPLFALDPTDAQYKRSAAYARQLAQQKGVG-EEILDKEQKKTPKEILLQSDDTSKRDE 2070
+ P F A Y R A L Q KG G + + K + K+ +D SK D
Sbjct: 618 PTDPQF---KRSAAYVRQVA----LKQPKGDGYQPTKSRHGKSSTKQPAAPGEDESKGDV 670
Query: 2071 PKQSDSMSREKVNPELSSMIRSLKRKTQQYQATASG 2178
+++ S +K ELSS+++S+K K++Q Q + G
Sbjct: 671 SVKTEGDSSKKEKYELSSLVKSIKMKSKQLQLPSGG 706
Score = 99.4 bits (246), Expect = 4e-18
Identities = 47/81 (58%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = +1
Query: 205 IKNDG--RKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHTDKR 378
I ND +K+I D RFS+VH DPRFQN PKH++KV IDSRFN+MF DK F+++S+ DKR
Sbjct: 35 INNDQSKKKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKR 94
Query: 379 GKRKDKNAVNPLRHYYKIDQQ 441
G+ K + NPLR YYKI+++
Sbjct: 95 GRVKKGKSENPLRRYYKIEEK 115
>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
ESF1, putative [Ricinus communis]
Length = 722
Score = 340 bits (872), Expect = 1e-90
Identities = 186/330 (56%), Positives = 223/330 (67%), Gaps = 7/330 (2%)
Frame = +1
Query: 658 THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 837
THRLA+VN+DW VRAVDLYVVL SFLPKGG +LSV VYPSEFGL+RMEEE + GPVGLF
Sbjct: 188 THRLAVVNLDWRHVRAVDLYVVLRSFLPKGGDILSVAVYPSEFGLQRMEEEELHGPVGLF 247
Query: 838 XXXXXXXXXXXXXX----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEFE 1005
ID+EKLRAYE SRLRYY+AV ECDS ATA+H+YKACDG+EFE
Sbjct: 248 DDEKKKNDEDEDEDEDDEIDEEKLRAYEKSRLRYYYAVVECDSVATAEHLYKACDGVEFE 307
Query: 1006 RSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR-K 1182
RSSNV DLRFVPD+M+F+ PRD+A E P +Y +DF T+ALQ SNI ++WDEDEP R K
Sbjct: 308 RSSNVFDLRFVPDSMEFKHPPRDIAKEAPTSYEGLDFHTKALQHSNIPISWDEDEPQRVK 367
Query: 1183 ALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRALI 1362
L+R FT QL E+++ F+A+D S S +D EG++ K +KYRALI
Sbjct: 368 TLKRKFTADQLAEMELQEFLASDGSESDDDG------NDDNAEGEADRKEKKRDKYRALI 421
Query: 1363 QAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIARK 1542
Q+ ME+TFNTGLE +SK ILE K+DKKSETVWEA LRK++EKK ARK
Sbjct: 422 QSGDGSDGEDEEEGQEMEITFNTGLEGLSKRILE-KRDKKSETVWEAHLRKQQEKKKARK 480
Query: 1543 NR--YLXXXXXXXXXXXXXXQPDDFFVEEP 1626
R Y + +DFFVEEP
Sbjct: 481 KRSKYSSEDESSDADEEMIEEANDFFVEEP 510
Score = 116 bits (291), Expect = 3e-23
Identities = 63/121 (52%), Positives = 86/121 (71%), Gaps = 3/121 (2%)
Frame = +1
Query: 1837 PAEDKLPSVACDDPRFSALFSSPLFALDPTDAQYKRSAAYARQLAQQ--KGVGEEILDKE 2010
P E+KLP+V DDPRFSALF+SPLFALDPTD Q+KRSAAYARQ+AQ+ KG +E+ + E
Sbjct: 577 PDENKLPTVDYDDPRFSALFNSPLFALDPTDPQFKRSAAYARQMAQRQHKGDRQELAEGE 636
Query: 2011 QKKTP-KEILLQSDDTSKRDEPKQSDSMSREKVNPELSSMIRSLKRKTQQYQATASGTAS 2187
KK P K LL + + ++E SD+ S +K ELS+++RS+K K++Q Q ++G
Sbjct: 637 HKKQPAKSQLLSDEPDANKNEHLTSDAASSKKEKHELSALVRSIKMKSKQVQLPSNGKTK 696
Query: 2188 K 2190
K
Sbjct: 697 K 697
Score = 99.4 bits (246), Expect = 4e-18
Identities = 43/76 (56%), Positives = 63/76 (82%)
Frame = +1
Query: 217 GRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHTDKRGKRKDK 396
GR+++EDPRF+++H DPRFQ VPK ++KV IDSRF+RMF+DK+F +SS+ D RGK K +
Sbjct: 38 GRELMEDPRFASIHTDPRFQKVPKQRTKVEIDSRFSRMFTDKSFGSSSAPLDSRGKAKKQ 97
Query: 397 NAVNPLRHYYKIDQQK 444
N+ + LRHYY I++++
Sbjct: 98 NSESFLRHYYHIEEEE 113
>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
Length = 726
Score = 339 bits (869), Expect = 2e-90
Identities = 180/325 (55%), Positives = 219/325 (67%), Gaps = 3/325 (0%)
Frame = +1
Query: 658 THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 837
THRLA+VNM+W QV+AVDL++VLSSFLPK G +LSV +YPSEFGLKRMEEEAV GP+GLF
Sbjct: 186 THRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLF 245
Query: 838 XXXXXXXXXXXXXXIDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEFERSSN 1017
ID EKLRAYE SRL YY+AV +CDSSATAD++YKACDG+EFERSSN
Sbjct: 246 DDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSN 305
Query: 1018 VLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR-KALRR 1194
VLDLRF+PD+M+F+ P D+ATE P Y +DF T+ALQ S I ++WDEDEP R K L+R
Sbjct: 306 VLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKR 365
Query: 1195 NFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRALIQAXX 1374
+ D ++ EL + F+A+D S D + QS + + KY AL+++
Sbjct: 366 KYNDDEVAELAMKEFLASDTDES--------ETDDNENDDQSDKEHKRQNKYLALLESGD 417
Query: 1375 XXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIARKNR-- 1548
MEVTFNTGLEDISK ILE K++KKSETVWEA L+KR EK+ ARKNR
Sbjct: 418 GSDRDDEEDGQDMEVTFNTGLEDISKRILE-KREKKSETVWEAYLKKRSEKRKARKNRSK 476
Query: 1549 YLXXXXXXXXXXXXXXQPDDFFVEE 1623
Y QPDDFFVEE
Sbjct: 477 YSSEDESDDTDQELMEQPDDFFVEE 501
Score = 115 bits (289), Expect = 4e-23
Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 4/130 (3%)
Frame = +1
Query: 1837 PAEDKLPSVACDDPRFSALFSSPLFALDPTDAQYKRSAAYARQLA---QQKGVGEEILDK 2007
P EDK+P+V DDPRFS+LF+SPLFALDPTD Q+KRSA YARQLA QQK G+ + K
Sbjct: 570 PDEDKIPAVDYDDPRFSSLFTSPLFALDPTDPQFKRSATYARQLAQKQQQKSDGDALRGK 629
Query: 2008 EQKKTPKEILLQSD-DTSKRDEPKQSDSMSREKVNPELSSMIRSLKRKTQQYQATASGTA 2184
E K K+ SD + +DEP SD +S ++ ELSS++RS+K K++Q + ++G
Sbjct: 630 EAMKLQKQTRPSSDGPEANKDEPLMSDVLSSKREKHELSSLVRSIKTKSKQVKLPSNGKK 689
Query: 2185 SKKAVSIQSN 2214
+K+ ++ N
Sbjct: 690 PRKSENMLFN 699
Score = 101 bits (252), Expect = 8e-19
Identities = 47/84 (55%), Positives = 63/84 (75%)
Frame = +1
Query: 193 QDNNIKNDGRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHTD 372
+D KN G K++ D RFS++H DPRFQ VPKH++KV IDSRFNRMF DK+F +SS+ D
Sbjct: 26 EDRRSKNGG-KIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLD 84
Query: 373 KRGKRKDKNAVNPLRHYYKIDQQK 444
KRGK K + N L HYY++++Q+
Sbjct: 85 KRGKPKKDRSGNTLSHYYRLEEQE 108