BLASTX nr result

ID: Coptis24_contig00001377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001377
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation...   774   0.0  
ref|XP_003522695.1| PREDICTED: eukaryotic translation initiation...   771   0.0  
ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation...   770   0.0  
ref|XP_003636390.1| Eukaryotic translation initiation factor 3 s...   758   0.0  
ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation...   756   0.0  

>ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Vitis vinifera]
          Length = 517

 Score =  774 bits (1998), Expect = 0.0
 Identities = 369/410 (90%), Positives = 397/410 (96%)
 Frame = +1

Query: 205  GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 384
            GYDPN+VP++V+TFVVHLYRHIREKNVYEIHQMYE SFQ LS+R+FKE+PWPSVDAVA H
Sbjct: 20   GYDPNYVPDSVRTFVVHLYRHIREKNVYEIHQMYESSFQTLSDRLFKETPWPSVDAVAHH 79

Query: 385  VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 564
            VD+DHVFCLLYREMW+RHLYARLSPT KQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 80   VDNDHVFCLLYREMWYRHLYARLSPTAKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 139

Query: 565  MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 744
            MVDEFVYQFQSFCQYRAKMK+KTE EIALLRQ+DQAWNVYGVLNFLQALVEKS IIQILE
Sbjct: 140  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQYDQAWNVYGVLNFLQALVEKSMIIQILE 199

Query: 745  QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQP 924
            QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PIDISQ 
Sbjct: 200  QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQ 259

Query: 925  GGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQILK 1104
             GVYTSVIGSHITTIYH+GFANLMLRRYVEAIREF+KIL+YI+K KQ+HQKSPQYEQILK
Sbjct: 260  -GVYTSVIGSHITTIYHFGFANLMLRRYVEAIREFNKILLYIYKTKQFHQKSPQYEQILK 318

Query: 1105 KNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYAC 1284
            KNEQMYALLAICLSLCPQ +LV + V +QL+EKYGEKM+RMQRYDDEA+ALYDELFSYAC
Sbjct: 319  KNEQMYALLAICLSLCPQEQLVEETVQSQLKEKYGEKMNRMQRYDDEAFALYDELFSYAC 378

Query: 1285 PKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLY 1434
            PKFITPS+P+YEEPLVNYNQ+AYRLQLKLFLYEVKQQQLLSGVR+FLK+Y
Sbjct: 379  PKFITPSAPVYEEPLVNYNQEAYRLQLKLFLYEVKQQQLLSGVRTFLKVY 428


>ref|XP_003522695.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Glycine max]
          Length = 514

 Score =  771 bits (1991), Expect = 0.0
 Identities = 371/414 (89%), Positives = 396/414 (95%)
 Frame = +1

Query: 193  PELSGYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDA 372
            P+  GYDPNFVP++VK+FVVHLYRHIREKNVYEIHQMYE SFQ LSER+FK++PWPSVDA
Sbjct: 13   PQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDA 72

Query: 373  VAPHVDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 552
            VA +VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQ
Sbjct: 73   VAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 132

Query: 553  WLWDMVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTII 732
            WLWDMVDEFVYQFQSFCQYRAKMKSKTE EIALLRQFDQAWNV+GVLNFLQALVEKS II
Sbjct: 133  WLWDMVDEFVYQFQSFCQYRAKMKSKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAII 192

Query: 733  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPID 912
            QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PID
Sbjct: 193  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPID 252

Query: 913  ISQPGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYE 1092
            I+Q  GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREF+KIL+YIFK KQYHQKSPQYE
Sbjct: 253  ITQQ-GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYE 311

Query: 1093 QILKKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELF 1272
            QILKKNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKM RMQRYDDEA+A+YDELF
Sbjct: 312  QILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELF 371

Query: 1273 SYACPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLY 1434
            SYACPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSGVR+FLK+Y
Sbjct: 372  SYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVY 425


>ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Glycine max]
          Length = 516

 Score =  770 bits (1988), Expect = 0.0
 Identities = 370/414 (89%), Positives = 396/414 (95%)
 Frame = +1

Query: 193  PELSGYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDA 372
            P+  GYDPNFVP++VK+FVVHLYRHIREKNVYEIHQMYE SFQ LSER+FK++PWPSVDA
Sbjct: 15   PQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDA 74

Query: 373  VAPHVDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 552
            VA +VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQ
Sbjct: 75   VAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 134

Query: 553  WLWDMVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTII 732
            WLWDMVDEFVYQFQSFCQYRAKMK+KTE EIALLRQFDQAWNV+GVLNFLQALVEKS II
Sbjct: 135  WLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAII 194

Query: 733  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPID 912
            QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PID
Sbjct: 195  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPID 254

Query: 913  ISQPGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYE 1092
            I+Q  GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREF+KIL+YIFK KQYHQKSPQYE
Sbjct: 255  ITQQ-GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYE 313

Query: 1093 QILKKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELF 1272
            QILKKNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKM RMQRYDDEA+A+YDELF
Sbjct: 314  QILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELF 373

Query: 1273 SYACPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLY 1434
            SYACPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSGVR+FLK+Y
Sbjct: 374  SYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVY 427


>ref|XP_003636390.1| Eukaryotic translation initiation factor 3 subunit L [Medicago
            truncatula] gi|355502325|gb|AES83528.1| Eukaryotic
            translation initiation factor 3 subunit L [Medicago
            truncatula]
          Length = 511

 Score =  758 bits (1957), Expect = 0.0
 Identities = 365/410 (89%), Positives = 389/410 (94%)
 Frame = +1

Query: 205  GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 384
            GYDPNFVP+ VKTFVVHLYRHIREKNVYEIHQMYE SFQ LSER FK++PWPSVDAVA +
Sbjct: 14   GYDPNFVPDPVKTFVVHLYRHIREKNVYEIHQMYETSFQTLSERFFKDTPWPSVDAVAQY 73

Query: 385  VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 564
            VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 74   VDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 133

Query: 565  MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 744
            MVDEFVYQFQSFCQYRAKMK+KTE EIALL+QFDQAWNV+GVLNFLQALVEKSTIIQILE
Sbjct: 134  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLKQFDQAWNVFGVLNFLQALVEKSTIIQILE 193

Query: 745  QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQP 924
            QEKEGLEQFT+ DGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL PIDISQ 
Sbjct: 194  QEKEGLEQFTSNDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLEPIDISQ- 252

Query: 925  GGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQILK 1104
             GVYT VIG HITTIYHYGFANLMLRRYV+AIREF+KIL+YIFK K YHQKSPQYEQILK
Sbjct: 253  SGVYTIVIGCHITTIYHYGFANLMLRRYVDAIREFNKILLYIFKYKVYHQKSPQYEQILK 312

Query: 1105 KNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYAC 1284
            KNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKMSRMQRYDDEA+A+YDELFSYAC
Sbjct: 313  KNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMSRMQRYDDEAFAMYDELFSYAC 372

Query: 1285 PKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLY 1434
            PKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSG+R+FLK+Y
Sbjct: 373  PKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGLRTFLKVY 422


>ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Cucumis sativus] gi|449508023|ref|XP_004163195.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit L-like [Cucumis sativus]
          Length = 528

 Score =  756 bits (1952), Expect = 0.0
 Identities = 363/411 (88%), Positives = 393/411 (95%), Gaps = 1/411 (0%)
 Frame = +1

Query: 205  GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 384
            GYDPNFVP++VK+FVVHLYRHIREKNVYE HQMYE SFQ LS+R+FK++PWPSVDAVA  
Sbjct: 30   GYDPNFVPDSVKSFVVHLYRHIREKNVYETHQMYETSFQSLSDRLFKDTPWPSVDAVAHF 89

Query: 385  VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 564
            VD+DHVFCLLYREMWFRHLYARLSPT KQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 90   VDNDHVFCLLYREMWFRHLYARLSPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 149

Query: 565  MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 744
            MVDEFVYQFQSFCQYRAKMK+KTE EIALLRQFDQAWNVYGVLN+LQA VEKS+II ILE
Sbjct: 150  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNYLQAFVEKSSIIHILE 209

Query: 745  QEKEGLEQFTATDGYDYNGG-SNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQ 921
            +EKEGLEQFTATDGYDY+GG SNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PIDISQ
Sbjct: 210  EEKEGLEQFTATDGYDYSGGSSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQ 269

Query: 922  PGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQIL 1101
              GV+TSVIGSHITTIYHYGFANLMLRRYV+AI EF++IL+YI+K KQYHQKSPQYEQIL
Sbjct: 270  Q-GVFTSVIGSHITTIYHYGFANLMLRRYVDAIHEFNRILLYIYKTKQYHQKSPQYEQIL 328

Query: 1102 KKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYA 1281
            KKNEQMYALLAIC+SLCPQGKLV + VN+QLREKYGEKM RMQRYD+EA+A+YDELFSYA
Sbjct: 329  KKNEQMYALLAICVSLCPQGKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDELFSYA 388

Query: 1282 CPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLY 1434
            CPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVR+FLK+Y
Sbjct: 389  CPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRTFLKVY 439


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