BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001363
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20844.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002320145.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CBI38188.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  165 bits (418), Expect = 3e-39
 Identities = 76/127 (59%), Positives = 96/127 (75%)
 Frame = -3

Query: 383 VFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACA 204
           +FD+M ERD VSWNSMIA YS+ GLNEEA  LF  ++N   +WKL+ +DFT A++ KAC 
Sbjct: 98  LFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACG 157

Query: 203 GFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWNS 24
           G GC +IGK VHG AVK+GFDSD+FV+G T+ MY K G LD+A   FD++  +DIV WN+
Sbjct: 158 GLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNT 217

Query: 23  MITGYTQ 3
           MITGY Q
Sbjct: 218 MITGYAQ 224



 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/125 (37%), Positives = 72/125 (57%)
 Frame = -3

Query: 380 FDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAG 201
           FD++  +D V+WN+MI  Y++N   EEA+ LF  +      +K   ND TF  + KA   
Sbjct: 204 FDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQM--ELEGFK--PNDTTFCCVLKASTA 259

Query: 200 FGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWNSM 21
                +G+  H   +K+G   DVFVA   +DMYSK  +++   R F  M KR++V +N++
Sbjct: 260 MSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNAL 319

Query: 20  ITGYT 6
           ITGY+
Sbjct: 320 ITGYS 324



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/128 (33%), Positives = 79/128 (61%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           + F+ +   ++V W  +I+ +++NG  E+A+  F  +  ++ D    T++F+ +S+ KA 
Sbjct: 404 EAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKM-RKFID---KTDEFSSSSVIKAV 459

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
           + +  V+ G+ +H   +K G D  ++V    IDMYSK G ++ A++VF  M ++++V WN
Sbjct: 460 SSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWN 519

Query: 26  SMITGYTQ 3
           SMITGY Q
Sbjct: 520 SMITGYAQ 527



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/123 (39%), Positives = 68/123 (55%)
 Frame = -3

Query: 371 MLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGC 192
           MLE + V W S I   +R GL ++A+S F  +L       +  N  T+++   ACA    
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRA----GIEPNAITYSATISACAQSTR 56

Query: 191 VKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWNSMITG 12
             +  S+H   +K GF + +FV+ G I MYSK   +  AR +FD M +RD V WNSMI G
Sbjct: 57  PSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAG 116

Query: 11  YTQ 3
           Y+Q
Sbjct: 117 YSQ 119



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/128 (35%), Positives = 70/128 (54%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           + F EM +R+ VS+N++I  YS  G  EEA+ ++S L +      +  + FTF  +F +C
Sbjct: 303 RAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSE----GMEPDSFTFVGLFSSC 358

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
           +    V  G  VH  +VK G DSDV V    ++ YSK G  D A   F+ + + + V W 
Sbjct: 359 SVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWA 418

Query: 26  SMITGYTQ 3
            +I+G+ Q
Sbjct: 419 GIISGFAQ 426


>ref|XP_002320145.1| predicted protein [Populus trichocarpa] gi|222860918|gb|EEE98460.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/126 (42%), Positives = 80/126 (63%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           + FDE+  RD V WN M++ Y+ N L EEA   F ++     +   MT+ FTF+S+  +C
Sbjct: 151 RAFDEVYCRDLVLWNVMLSCYAMNCLAEEASGFFKLM----QEENFMTDGFTFSSMLNSC 206

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
              G   +G+ +HG ++K+ FD DV VA G +DMY+KS N+D AR+ FD M  R++V WN
Sbjct: 207 GTLGSCNLGRQIHGLSIKLSFDLDVLVASGLVDMYAKSENIDDARKAFDGMAARNVVSWN 266

Query: 26  SMITGY 9
           +M+ GY
Sbjct: 267 TMVVGY 272



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAY--SRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFK 213
           ++FDEM  R+ V+WN++I      R    E +V +      +    K+  +  T   + +
Sbjct: 44  RLFDEMHVRNVVTWNTVICGLVDCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGLLR 103

Query: 212 ACAGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVV 33
           AC     V+IG+ +H   VK+GF  + FV    +D+Y K G +  ARR FD +  RD+V+
Sbjct: 104 ACLELNDVEIGRELHCFIVKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVL 163

Query: 32  WNSMITGY 9
           WN M++ Y
Sbjct: 164 WNVMLSCY 171



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/126 (32%), Positives = 68/126 (53%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           K FD M  R+ VSWN+M+  Y R G   EA+ L   L+  + +  L  ++ T ASI ++C
Sbjct: 252 KAFDGMAARNVVSWNTMVVGYGRLGDGGEAMKL---LIGMFQE-DLRPDEITLASIIRSC 307

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
           +          V+   +K GF + + +A   I+ YSK G++ +A + F+ + + D+V W 
Sbjct: 308 SSALTSCEIMQVNAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFNTVLEPDLVTWT 367

Query: 26  SMITGY 9
           S+I  Y
Sbjct: 368 SLIGAY 373


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/127 (41%), Positives = 80/127 (62%)
 Frame = -3

Query: 383 VFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACA 204
           +FD +  R  + WN++I  Y  N  + + + LF  L++ Y     + ++FT   + K CA
Sbjct: 69  IFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEY-----LPDNFTLPCVIKGCA 123

Query: 203 GFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWNS 24
             G V+ GK +HG A+K+GF SDVFV G  ++MYSK G +D AR+VFD M  +D+V+WNS
Sbjct: 124 RLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNS 183

Query: 23  MITGYTQ 3
           +I GY +
Sbjct: 184 LIDGYAR 190



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/125 (30%), Positives = 64/125 (51%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           ++F +M   D V+WN MIA Y  NG   +AV +F ++L   +      +  T  S+  A 
Sbjct: 261 ELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS----RPSHATLVSVLSAV 316

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
           +G   +  G+ +H    K GF+ D  +    I+MY+K G ++ A  VF  + K+ +  W 
Sbjct: 317 SGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWT 376

Query: 26  SMITG 12
           ++I G
Sbjct: 377 AIIVG 381



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           KVFD M+++D V WNS+I  Y+R G  + A+ LF  +  R        + F++  +    
Sbjct: 168 KVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER--------DAFSWTVLVDGL 219

Query: 206 AGFGCVKIGKSVHGCAVKMGFDS----DVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDI 39
           +  G V+  + +        FD     ++      I+ Y KSG+ D A  +F +M   D+
Sbjct: 220 SKCGKVESARKL--------FDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDL 271

Query: 38  VVWNSMITGY 9
           V WN MI GY
Sbjct: 272 VTWNLMIAGY 281


>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/128 (43%), Positives = 85/128 (66%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           +VFD +L +D VSW  M+  ++ N   +EA+ LFS +  R   +K   N+FTFAS+FKAC
Sbjct: 195 EVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQM--RMVGFK--PNNFTFASVFKAC 250

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
            G     +GKSVHGCA+K  ++ D++V    +D+Y+KSG++D ARR F+ + K+D++ W+
Sbjct: 251 LGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWS 310

Query: 26  SMITGYTQ 3
            MI  Y Q
Sbjct: 311 FMIARYAQ 318



 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/128 (32%), Positives = 77/128 (60%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           + F+E+ ++D + W+ MIA Y+++  ++EAV +F  +        ++ N FTFAS+ +AC
Sbjct: 296 RAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQAL----VLPNQFTFASVLQAC 351

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
           A    + +G  +H   +K+G  SDVFV+   +D+Y+K G ++ +  +F     R+ V WN
Sbjct: 352 ATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWN 411

Query: 26  SMITGYTQ 3
           ++I G+ Q
Sbjct: 412 TVIVGHVQ 419



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/128 (35%), Positives = 71/128 (55%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           K+FDEM ER+ +S+ ++I  Y+ +    EA+ LF  L    ++     N F F +I K  
Sbjct: 94  KLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHE----LNPFVFTTILKLL 149

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWN 27
               C ++G  +H C  K+G +S+ FV    ID YS  G +D+AR VFD +  +D+V W 
Sbjct: 150 VSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWT 209

Query: 26  SMITGYTQ 3
            M+T + +
Sbjct: 210 GMVTCFAE 217


>ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|222854713|gb|EEE92260.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/127 (43%), Positives = 83/127 (65%)
 Frame = -3

Query: 383 VFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACA 204
           +FD M+ ++ VSWN++IA Y+R G  ++A  LFS +L       +    FT++S+  ACA
Sbjct: 175 IFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRE----NVKPTHFTYSSVLCACA 230

Query: 203 GFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVVWNS 24
             G ++ GK VH   +K G     FV    +DMY+KSG+++ A++VFDR+ KRD+V WNS
Sbjct: 231 SMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNS 290

Query: 23  MITGYTQ 3
           M+TGY+Q
Sbjct: 291 MLTGYSQ 297



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/130 (36%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           K+FDEM  RD V+W ++I  YS++   ++A+ L   +L       L  N FT AS+ KA 
Sbjct: 71  KLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRI----GLKPNQFTLASLLKAA 126

Query: 206 AGFGCVKI--GKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKRDIVV 33
           +G G   +  G+ +HG  ++ G+DS+V+V+   +DMY++  +L+ A+ +FD M  ++ V 
Sbjct: 127 SGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVS 186

Query: 32  WNSMITGYTQ 3
           WN++I GY +
Sbjct: 187 WNALIAGYAR 196



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = -3

Query: 386 KVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 207
           KVFD + +RD VSWNSM+  YS++GL + A+  F  +L      ++  ND TF  +  AC
Sbjct: 275 KVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRT----RIAPNDITFLCVLTAC 330

Query: 206 AGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMG-KRDIVVW 30
           +  G +  G+       K   +  +      +D+  ++G+LD A +    M  K    VW
Sbjct: 331 SHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVW 390

Query: 29  NSMI 18
            +++
Sbjct: 391 GALL 394



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -3

Query: 224 SIFKACAGFGCVKIGKSVHGCAVKMGFDSDVFVAGGTIDMYSKSGNLDIARRVFDRMGKR 45
           ++ K C     +  GK +H   +   F  D+ +    +++Y+K G+L  AR++FD M  R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 44  DIVVWNSMITGYTQ 3
           D+V W ++ITGY+Q
Sbjct: 80  DVVTWTALITGYSQ 93