BLASTX nr result

ID: Coptis24_contig00001355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001355
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298708.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09
gb|AFK40012.1| unknown [Lotus japonicus]                               67   5e-09
gb|AFK42834.1| unknown [Lotus japonicus]                               66   6e-09
gb|AFK33954.1| unknown [Lotus japonicus]                               66   6e-09
ref|NP_001235294.1| uncharacterized protein LOC100527126 [Glycin...    66   6e-09

>ref|XP_002298708.1| predicted protein [Populus trichocarpa] gi|222845966|gb|EEE83513.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -3

Query: 391 CAICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 287
           C IC+SEFV GD VRILPKC HGFHVKCI+ WLSS
Sbjct: 117 CVICISEFVHGDRVRILPKCSHGFHVKCIDEWLSS 151


>gb|AFK40012.1| unknown [Lotus japonicus]
          Length = 206

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 391 CAICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 287
           CAICL EFVDG+ VR+LPKC HGFHVKCI+ WL S
Sbjct: 115 CAICLGEFVDGEKVRVLPKCNHGFHVKCIDKWLLS 149


>gb|AFK42834.1| unknown [Lotus japonicus]
          Length = 107

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -3

Query: 391 CAICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 287
           C ICLSEF DG+ VR+LPKC HGFHV+CI+ WLSS
Sbjct: 18  CVICLSEFTDGEKVRVLPKCNHGFHVRCIDKWLSS 52


>gb|AFK33954.1| unknown [Lotus japonicus]
          Length = 229

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -3

Query: 391 CAICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 287
           C ICLSEF DG+ VR+LPKC HGFHV+CI+ WLSS
Sbjct: 140 CVICLSEFTDGEKVRVLPKCNHGFHVRCIDKWLSS 174


>ref|NP_001235294.1| uncharacterized protein LOC100527126 [Glycine max]
           gi|255631612|gb|ACU16173.1| unknown [Glycine max]
          Length = 232

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 391 CAICLSEFVDGDGVRILPKCKHGFHVKCIEGWLSS 287
           C ICLSEF +GD VRILPKC HGFHV+CI+ WLSS
Sbjct: 144 CVICLSEFANGDKVRILPKCNHGFHVRCIDKWLSS 178


Top