BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001353
         (2462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]    311   4e-82
dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica G...   311   5e-82
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   310   9e-82
ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP...   309   2e-81
emb|CBI32444.3| unnamed protein product [Vitis vinifera]              308   6e-81

>dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 479

 Score =  311 bits (798), Expect = 4e-82
 Identities = 170/316 (53%), Positives = 201/316 (63%), Gaps = 5/316 (1%)
 Frame = -2

Query: 2182 PSHYPAPHYLPFIHXXXXXXXXXXXXXQGGGEGVT-----EENRKSIWVGDLHYWMDENY 2018
            P H  APH++PF                  G         +E  K+IWVGDLHYWMDENY
Sbjct: 109  PPHQFAPHFVPFHAVAPPPPPLQPRVGVAMGSPAPAAQPGQEENKTIWVGDLHYWMDENY 168

Query: 2017 LHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFYSHAAAEKILQTYNGAPMLSSEQPFRL 1838
            LHTCFG+TGEV +IKVIRNKQTGQSEGYGFVEFYSHAAAEK+L  + G  M +++QPFR+
Sbjct: 169  LHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLDGFAGHIMPNTDQPFRI 228

Query: 1837 NWASNSMGDKRSDVGTDRSIFVGDLAADVTDTLLQETFASKYSSVKGAKVVIDATTGRSK 1658
            NWAS SMGD+RSD+ +D SIFVGDLA+DV DT L ETF+S+YSSVKGAKVVIDA TGRSK
Sbjct: 229  NWASFSMGDRRSDIASDHSIFVGDLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSK 288

Query: 1657 GYGFVRFGDDNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXX 1478
            GYGFVRFGDD+E++ AMTEMNG YCS+R MRIG ATPRK                     
Sbjct: 289  GYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPATPRK---------------SSGTSG 333

Query: 1477 XXXXXXXXXXXXXXXTIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITRKSKGYAF 1298
                           T+FVGGLD    E+DL + F  +GEI +   VK P+    K   F
Sbjct: 334  STGSSARSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISS---VKIPV---GKQCGF 387

Query: 1297 ISFATSEQAKKVLAEL 1250
            + F   + A+  L  L
Sbjct: 388  VQFLQRKNAEDALQGL 403



 Score = 63.5 bits (153), Expect = 3e-07
 Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 24/274 (8%)
 Frame = -2

Query: 1429 IFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITRKSKGYAFISFATSEQAKKVLAEL 1250
            I+VG L     E  L   FG  GE+ A +++++  T +S+GY F+ F +   A+KVL   
Sbjct: 155  IWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLDGF 214

Query: 1249 KDGVEVK--------------GKHAGISASQDSDTIYMGNICKSWTKEQVLETLKG-YGI 1115
               +                 G      AS  S  I++G++        +LET    Y  
Sbjct: 215  AGHIMPNTDQPFRINWASFSMGDRRSDIASDHS--IFVGDLASDVNDTALLETFSSRYSS 272

Query: 1114 EQIEDIFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLR---------KPDAVFGRNRS 962
             +   + +     + G+ +G+ ++ FG  S+   A   +          +      R  S
Sbjct: 273  VKGAKVVI---DANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPATPRKSS 329

Query: 961  AKVAFVPSMHPSEEALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSRDLVNVRR 782
                   S   S+  L+   TV+V GL  + +E  LKQ   QYG++  V++         
Sbjct: 330  GTSGSTGSSARSDGDLTNT-TVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPVG------ 382

Query: 781  EDFGFVSFTSRENALACVAGINNAQVEDGDVTVR 680
            +  GFV F  R+NA   + G+N + +  G  TVR
Sbjct: 383  KQCGFVQFLQRKNAEDALQGLNGSTI--GKQTVR 414



 Score = 62.0 bits (149), Expect = 7e-07
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
 Frame = -2

Query: 2062 SIWVGDLHYWMDEN-YLHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFYSHAAAEKILQ 1886
            SI+VGDL   +++   L T       V   KV+ +  TG+S+GYGFV F   +     + 
Sbjct: 247  SIFVGDLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMT 306

Query: 1885 TYNGA-----PM-LSSEQPFRLNWASNSMGDKRSDVG--TDRSIFVGDLAADVTDTLLQE 1730
              NG      PM +    P + +  S S G      G  T+ ++FVG L  +V++  L++
Sbjct: 307  EMNGVYCSTRPMRIGPATPRKSSGTSGSTGSSARSDGDLTNTTVFVGGLDPNVSEDDLKQ 366

Query: 1729 TFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQMRI 1562
            TF S+Y  +   K+ +       K  GFV+F        A+  +NG     + +R+
Sbjct: 367  TF-SQYGEISSVKIPV------GKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRL 415


>dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 345

 Score =  311 bits (797), Expect = 5e-82
 Identities = 166/282 (58%), Positives = 195/282 (69%)
 Frame = -2

Query: 2095 GGEGVTEENRKSIWVGDLHYWMDENYLHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFY 1916
            GG G  EEN K+IWVGDLHYWMDENYLH+CFG+TGEV +IKVIRNKQTGQSEGYGFVEFY
Sbjct: 10   GGGGGQEEN-KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 68

Query: 1915 SHAAAEKILQTYNGAPMLSSEQPFRLNWASNSMGDKRSDVGTDRSIFVGDLAADVTDTLL 1736
            SHAAAEK+L+ + G  M +++QPFR+NWAS SMGD+RSD+ +D SIFVGDLA+DV DT L
Sbjct: 69   SHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTL 128

Query: 1735 QETFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQMRIGL 1556
             ETF+ +YSSVKGAKVVIDA TGRSKGYGFVRFGDDNE++ AMTEMNG YCS+R MRIG 
Sbjct: 129  LETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGP 188

Query: 1555 ATPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIFVGGLDRKAVEEDLIKV 1376
            ATPRK                                    T+FVGGLD    E+DL + 
Sbjct: 189  ATPRK---------------TSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQT 233

Query: 1375 FGAFGEIKAARIVKHPITRKSKGYAFISFATSEQAKKVLAEL 1250
            F  +GEI +   VK P+    K   F+ F   + A+  L  L
Sbjct: 234  FSQYGEISS---VKIPV---GKQCGFVQFVQRKNAEDALQGL 269



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 24/274 (8%)
 Frame = -2

Query: 1429 IFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITRKSKGYAFISFATSEQAKKVLAEL 1250
            I+VG L     E  L   FG  GE+ A +++++  T +S+GY F+ F +   A+KVL   
Sbjct: 21   IWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGF 80

Query: 1249 KDGVEVK--------------GKHAGISASQDSDTIYMGNICKSWTKEQVLETL-KGYGI 1115
               +                 G      AS  S  I++G++        +LET  K Y  
Sbjct: 81   AGHIMPNTDQPFRINWASFSMGDRRSDIASDHS--IFVGDLASDVNDTTLLETFSKRYSS 138

Query: 1114 EQIEDIFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLR---------KPDAVFGRNRS 962
             +   + +     + G+ +G+ ++ FG  ++   A   +          +      R  S
Sbjct: 139  VKGAKVVI---DANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS 195

Query: 961  AKVAFVPSMHPSEEALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSRDLVNVRR 782
                   S   S+  L+   TV+V GL  + +E  L+Q   QYG++  V++         
Sbjct: 196  GTSGPTGSAARSDGDLTNT-TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVG------ 248

Query: 781  EDFGFVSFTSRENALACVAGINNAQVEDGDVTVR 680
            +  GFV F  R+NA   + G+N + +  G  TVR
Sbjct: 249  KQCGFVQFVQRKNAEDALQGLNGSTI--GKQTVR 280



 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 9/176 (5%)
 Frame = -2

Query: 2062 SIWVGDLHYWM-DENYLHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFYSHAAAEKILQ 1886
            SI+VGDL   + D   L T       V   KV+ +  TG+S+GYGFV F         + 
Sbjct: 113  SIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMT 172

Query: 1885 TYNGA-----PM-LSSEQPFRLNWASNSMGDKRSDVG--TDRSIFVGDLAADVTDTLLQE 1730
              NG      PM +    P + +  S   G      G  T+ ++FVG L  +V++  L++
Sbjct: 173  EMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQ 232

Query: 1729 TFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQMRI 1562
            TF S+Y  +   K+ +       K  GFV+F        A+  +NG     + +R+
Sbjct: 233  TF-SQYGEISSVKIPV------GKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRL 281


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  310 bits (795), Expect = 9e-82
 Identities = 175/313 (55%), Positives = 199/313 (63%)
 Frame = -2

Query: 2176 HYPAPHYLPFIHXXXXXXXXXXXXXQGGGEGVTEENRKSIWVGDLHYWMDENYLHTCFGH 1997
            H+P PH     H              GGG G   ENR ++W+GDLH+WMDENYLHTCF  
Sbjct: 83   HHPHPHQPQQHHQNQGSSG-------GGGGG---ENR-TVWIGDLHHWMDENYLHTCFAS 131

Query: 1996 TGEVTSIKVIRNKQTGQSEGYGFVEFYSHAAAEKILQTYNGAPMLSSEQPFRLNWASNSM 1817
            TGE+ SIKVIRNKQTG SEGYGFVEFY+HA AEK+LQ Y G  M ++EQPFRLNWA+ S 
Sbjct: 132  TGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVLQNYAGILMPNTEQPFRLNWATFST 191

Query: 1816 GDKRSDVGTDRSIFVGDLAADVTDTLLQETFASKYSSVKGAKVVIDATTGRSKGYGFVRF 1637
            GDKRSD   D SIFVGDLAADVTD+LL ETF S+Y SVK AKVV DA TGRSKGYGFVRF
Sbjct: 192  GDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRF 251

Query: 1636 GDDNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1457
            GDDNER+QAMTEMNG YCSSR MRIG ATPRK                            
Sbjct: 252  GDDNERTQAMTEMNGVYCSSRAMRIGAATPRK-------STGYQHQGGYVSNGASGQAFQ 304

Query: 1456 XXXXXXXXTIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITRKSKGYAFISFATSE 1277
                    TIFVGGLD    +EDL + F  +GEI +   VK P+    KG  F+ FA+  
Sbjct: 305  ADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVS---VKIPV---GKGCGFVQFASRS 358

Query: 1276 QAKKVLAELKDGV 1238
             A++ L +L   V
Sbjct: 359  NAEEALQKLNGTV 371



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
 Frame = -2

Query: 2062 SIWVGDLHYWMDENYLHTCF-GHTGEVTSIKVIRNKQTGQSEGYGFVEFYSHAAAEKILQ 1886
            SI+VGDL   + ++ LH  F      V + KV+ +  TG+S+GYGFV F       + + 
Sbjct: 203  SIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMT 262

Query: 1885 TYNGA-------------PMLSSEQPFRLNWASNSMGDKRSDV---GTDRSIFVGDLAAD 1754
              NG              P  S+    +  + SN    +        T+ +IFVG L  +
Sbjct: 263  EMNGVYCSSRAMRIGAATPRKSTGYQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPN 322

Query: 1753 VTDTLLQETFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSR 1574
            VTD  L++ F S+Y  +   K+ +       KG GFV+F   +   +A+ ++NG     +
Sbjct: 323  VTDEDLKQPF-SQYGEIVSVKIPV------GKGCGFVQFASRSNAEEALQKLNGTVIGKQ 375

Query: 1573 QMRI 1562
             +R+
Sbjct: 376  TVRL 379


>ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
            sativus] gi|449496017|ref|XP_004160013.1| PREDICTED:
            polyadenylate-binding protein RBP47C-like [Cucumis
            sativus]
          Length = 429

 Score =  309 bits (792), Expect = 2e-81
 Identities = 188/389 (48%), Positives = 227/389 (58%), Gaps = 4/389 (1%)
 Frame = -2

Query: 2182 PSHY---PAPHYLPFIHXXXXXXXXXXXXXQGGGEGVTEENRKSIWVGDLHYWMDENYLH 2012
            P HY   P+PHY+P+               Q   +G T EN K+IWVGDL +WMDENYLH
Sbjct: 52   PQHYVPPPSPHYIPY-RQYPPPHQLNGQQHQQPHQGSTSEN-KTIWVGDLQHWMDENYLH 109

Query: 2011 TCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFYSHAAAEKILQTYNGAPMLSSEQPFRLNW 1832
            +CF  TGE++S+KVIRNKQTG SEGYGFVEF+SH  AEK+LQ Y+   M ++EQ FRLNW
Sbjct: 110  SCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNW 169

Query: 1831 ASNSMGDKRSDVGTDRSIFVGDLAADVTDTLLQETFASKYSSVKGAKVVIDATTGRSKGY 1652
            A+ S GDKRS+ G+D SIFVGDLAADVTD++L ETFASKYSSVK AKVV D  TG SKGY
Sbjct: 170  ATFSTGDKRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGY 229

Query: 1651 GFVRFGDDNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXXXX 1472
            GFVRFGDDNERSQAMTEMNG YCSSR MRIG ATP+K                       
Sbjct: 230  GFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPKK----SSGYQQQYSSQGYASNGSF 285

Query: 1471 XXXXXXXXXXXXXTIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITRKSKGYAFIS 1292
                         TIF+GGLD    +EDL ++F   GEI +   VK P+    KG  FI 
Sbjct: 286  SHGHQSDGDFTNTTIFIGGLDPNVTDEDLKQLFSQHGEIVS---VKIPV---GKGCGFIQ 339

Query: 1291 FATSEQAKKVLAELKDGVEVKGKHAGISASQDSDTIYMGNICKSWTKEQV-LETLKGYGI 1115
            FA  + A++ L +L   V  K           ++  Y G+    W+      +   GYG 
Sbjct: 340  FANRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGY 399

Query: 1114 EQIEDIFLPEDPKSEGKIRGFAYMEFGAH 1028
                 + LP DP +       AY  +G H
Sbjct: 400  A----LPLPYDPPTMYAAAYGAYPMYGTH 424


>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  308 bits (788), Expect = 6e-81
 Identities = 165/285 (57%), Positives = 195/285 (68%), Gaps = 2/285 (0%)
 Frame = -2

Query: 2086 GVTEENRKSIWVGDLHYWMDENYLHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFYSHA 1907
            G T+E  K++WVGDLH WMD+NYL TCFGHTGEV+SIK+IRNKQTGQSEGYGFVEF+S A
Sbjct: 3    GSTDEI-KTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRA 61

Query: 1906 AAEKILQTYNGAPMLSSEQPFRLNWASNSMGDKRSDVGTDRSIFVGDLAADVTDTLLQET 1727
             AEKIL +YNG  M ++EQPFRLNWA+ S GD+R+D G+D SIFVGDLA+DVTD LLQET
Sbjct: 62   TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQET 121

Query: 1726 FASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQMRIGLATP 1547
            FA++Y SVKGAKVV D+ TGRSKGYGFVRFGD+NERS+AM EMNG YCSSR MRIG+ATP
Sbjct: 122  FATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATP 181

Query: 1546 RK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIFVGGLDRKAVEEDLIKVF 1373
            +K                                      TIFVGGLD +  +EDL + F
Sbjct: 182  KKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSF 241

Query: 1372 GAFGEIKAARIVKHPITRKSKGYAFISFATSEQAKKVLAELKDGV 1238
              FGE+ +   VK P+    KG  F+ FA    A+  L  L   V
Sbjct: 242  SQFGEVVS---VKIPV---GKGCGFVQFANRNSAEDALQRLNGTV 280



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
 Frame = -2

Query: 2062 SIWVGDLHYWMDENYLHTCFG-HTGEVTSIKVIRNKQTGQSEGYGFVEFYSHAAAEKILQ 1886
            SI+VGDL   + +  L   F      V   KV+ +  TG+S+GYGFV F       + + 
Sbjct: 103  SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 162

Query: 1885 TYNGAPMLSSEQPFRLNWASN---------------------------SMGDKRSDVGTD 1787
              NG  +  S +P R+  A+                            + G + +   T+
Sbjct: 163  EMNG--IYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 220

Query: 1786 RSIFVGDLAADVTDTLLQETFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAM 1607
             +IFVG L ++VTD  L+++F S++  V   K+ +       KG GFV+F + N    A+
Sbjct: 221  TTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPV------GKGCGFVQFANRNSAEDAL 273

Query: 1606 TEMNGQYCSSRQMRI 1562
              +NG     + +R+
Sbjct: 274  QRLNGTVIGKQTVRL 288