BLASTX nr result
ID: Coptis24_contig00001338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001338
(1907 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 421 e-122
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 412 e-120
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 412 e-119
ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II su... 409 e-119
emb|CAA21466.2| DNA-directed RNA polymerase (EC 2.7.7.6) II larg... 406 e-117
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 421 bits (1082), Expect(2) = e-122
Identities = 230/363 (63%), Positives = 256/363 (70%), Gaps = 6/363 (1%)
Frame = -1
Query: 1907 LADMALQGIPDISKVFIKQEKGNRYHXXXXXXXXXXXEWMVDTEGVNLLAVMCHEDVDAK 1728
L +MAL+GIPDI+KVFIK K N++ WM+DTEGVNLLAVMCHEDVDA+
Sbjct: 1288 LTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEVE--WMLDTEGVNLLAVMCHEDVDAR 1345
Query: 1727 RTTSNHLIEVLEVLGIEAARRALLDELRKVLSFDGSYVNYRHLAVLCDTMTYRGHLMAIT 1548
RTTSNHLIEV+EVLGIEA RR+LLDELR V+SFDGSYVNYRHLA+LCDTMTYRGHLMAIT
Sbjct: 1346 RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT 1405
Query: 1547 RHGINRNDTGPLMRCSFEETVDILLGAAVYAETDHLRGVTENIMLGQLAPIGTGDCAMYL 1368
RHGINRNDTGP+MRCSFEETVDILL AAVYAETD LRGVTENIMLGQLAPIGTGDCA+YL
Sbjct: 1406 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQLAPIGTGDCALYL 1465
Query: 1367 NDQMLLKSVDLQLPSYFEGGGFDFSVTPS-SHVTITPYHASFQ--DYSLSPNVRSSPITD 1197
NDQML +++LQLPSY E G DF +TPS S +T TPYH +Y LSPN+R SPITD
Sbjct: 1466 NDQMLQHAIELQLPSYME--GLDFGMTPSRSPITGTPYHDGMMSPNYLLSPNLRLSPITD 1523
Query: 1196 ASFSPYVGGMG---TSSAAWSPLSSGYNSSCRGYIPNTPSYRPSSLGNDPYLLGXXXXXX 1026
A FSPYVGGM TSS +SP S GY+ S GY P +P Y P+S G P G
Sbjct: 1524 AQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP--- 1580
Query: 1025 XXXXXXPVIDSNILXXXXXXXXXXXXXXXXSLTAYSPTSPSYDQTRPSYILNSPSYILNS 846
S + +YSPTSPSY T PSY SPSY S
Sbjct: 1581 ---------TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 845 PSY 837
PSY
Sbjct: 1632 PSY 1634
Score = 47.0 bits (110), Expect(2) = e-122
Identities = 25/43 (58%), Positives = 27/43 (62%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSPSY SP SPTS +YS TS S TSP TS +YSPT
Sbjct: 1630 TSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPT 1672
Score = 56.2 bits (134), Expect(2) = 6e-13
Identities = 45/151 (29%), Positives = 56/151 (37%)
Frame = -1
Query: 1289 TPSSHVTITPYHASFQDYSLSPNVRSSPITDASFSPYVGGMGTSSAAWSPLSSGYNSSCR 1110
+P T Y S YS P + T S+SP +S ++SP S Y+ +
Sbjct: 1575 SPGYSPTSPTYSPSSPGYS--PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 1109 GYIPNTPSYRPSSLGNDPYLLGXXXXXXXXXXXXPVIDSNILXXXXXXXXXXXXXXXXSL 930
Y P +PSY P+S P +
Sbjct: 1633 SYSPTSPSYSPTSPVYSP--------------------------TSPSYSPTSPAYSPTS 1666
Query: 929 TAYSPTSPSYDQTRPSYILNSPSYILNSPSY 837
AYSPTSPSY T PSY SPSY SPSY
Sbjct: 1667 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1697
Score = 45.8 bits (107), Expect(2) = 6e-13
Identities = 26/43 (60%), Positives = 26/43 (60%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSPSY SP SPTS YS TS S TSP TS SYSPT
Sbjct: 1693 TSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPT 1735
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 412 bits (1059), Expect(2) = e-120
Identities = 225/363 (61%), Positives = 255/363 (70%), Gaps = 6/363 (1%)
Frame = -1
Query: 1907 LADMALQGIPDISKVFIKQEKGNRYHXXXXXXXXXXXEWMVDTEGVNLLAVMCHEDVDAK 1728
L +MAL+GIPDI+KVFIK K N++ WM+DTEGVNLLAVM HEDVDA+
Sbjct: 1288 LTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEME--WMLDTEGVNLLAVMTHEDVDAR 1345
Query: 1727 RTTSNHLIEVLEVLGIEAARRALLDELRKVLSFDGSYVNYRHLAVLCDTMTYRGHLMAIT 1548
RTTSNHLIEV+EVLGIEA RR+LLDELR V+SFDGSYVNYRHLA+LCDTMTYRGHLMAIT
Sbjct: 1346 RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT 1405
Query: 1547 RHGINRNDTGPLMRCSFEETVDILLGAAVYAETDHLRGVTENIMLGQLAPIGTGDCAMYL 1368
RHGINRNDTGP+MRCSFEETVDILL AAVYAETDHLRGVTENIMLGQLAPIGTG CA+YL
Sbjct: 1406 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL 1465
Query: 1367 NDQMLLKSVDLQLPSYFEGGGFDFSVTPS-SHVTITPYHASFQ--DYSLSPNVRSSPITD 1197
ND+ML +++LQLPSY + G DF +TPS S ++ TPYH +Y LSPN+R SPI+D
Sbjct: 1466 NDEMLKNAIELQLPSYID--GLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISD 1523
Query: 1196 ASFSPYVGGMG---TSSAAWSPLSSGYNSSCRGYIPNTPSYRPSSLGNDPYLLGXXXXXX 1026
A FSPYVGGM TSS +SP S GY+ S GY P +P Y P+S G P G
Sbjct: 1524 AQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP--- 1580
Query: 1025 XXXXXXPVIDSNILXXXXXXXXXXXXXXXXSLTAYSPTSPSYDQTRPSYILNSPSYILNS 846
S + +YSPTSPSY T PSY SPSY S
Sbjct: 1581 ---------TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 845 PSY 837
PSY
Sbjct: 1632 PSY 1634
Score = 48.1 bits (113), Expect(2) = e-120
Identities = 27/43 (62%), Positives = 27/43 (62%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSPSY SP SPTS YS TS S TSPG TS SYSPT
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1707
Score = 59.7 bits (143), Expect(2) = 5e-11
Identities = 46/154 (29%), Positives = 59/154 (38%)
Frame = -1
Query: 1298 FSVTPSSHVTITPYHASFQDYSLSPNVRSSPITDASFSPYVGGMGTSSAAWSPLSSGYNS 1119
+S T S+ +P ++ S SP S T S+SP +S A+SP S Y+
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSPTSPSYSPXSPAYSPTSPAYSPTSPAYSP 1664
Query: 1118 SCRGYIPNTPSYRPSSLGNDPYLLGXXXXXXXXXXXXPVIDSNILXXXXXXXXXXXXXXX 939
+ Y P +PSY P+S P
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSP--------------------------------------- 1685
Query: 938 XSLTAYSPTSPSYDQTRPSYILNSPSYILNSPSY 837
+ AYSPTSP Y T PSY SPSY SPSY
Sbjct: 1686 -TSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1718
Score = 35.8 bits (81), Expect(2) = 5e-11
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSP+Y SP SPTS YS +S S +SP S YSP+
Sbjct: 1747 TSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPS 1789
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
sativus]
Length = 1853
Score = 412 bits (1059), Expect(2) = e-119
Identities = 225/363 (61%), Positives = 255/363 (70%), Gaps = 6/363 (1%)
Frame = -1
Query: 1907 LADMALQGIPDISKVFIKQEKGNRYHXXXXXXXXXXXEWMVDTEGVNLLAVMCHEDVDAK 1728
L +MAL+GIPDI+KVFIK K N++ WM+DTEGVNLLAVM HEDVDA+
Sbjct: 1288 LTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEME--WMLDTEGVNLLAVMTHEDVDAR 1345
Query: 1727 RTTSNHLIEVLEVLGIEAARRALLDELRKVLSFDGSYVNYRHLAVLCDTMTYRGHLMAIT 1548
RTTSNHLIEV+EVLGIEA RR+LLDELR V+SFDGSYVNYRHLA+LCDTMTYRGHLMAIT
Sbjct: 1346 RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT 1405
Query: 1547 RHGINRNDTGPLMRCSFEETVDILLGAAVYAETDHLRGVTENIMLGQLAPIGTGDCAMYL 1368
RHGINRNDTGP+MRCSFEETVDILL AAVYAETDHLRGVTENIMLGQLAPIGTG CA+YL
Sbjct: 1406 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL 1465
Query: 1367 NDQMLLKSVDLQLPSYFEGGGFDFSVTPS-SHVTITPYHASFQ--DYSLSPNVRSSPITD 1197
ND+ML +++LQLPSY + G DF +TPS S ++ TPYH +Y LSPN+R SPI+D
Sbjct: 1466 NDEMLKNAIELQLPSYID--GLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISD 1523
Query: 1196 ASFSPYVGGMG---TSSAAWSPLSSGYNSSCRGYIPNTPSYRPSSLGNDPYLLGXXXXXX 1026
A FSPYVGGM TSS +SP S GY+ S GY P +P Y P+S G P G
Sbjct: 1524 AQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP--- 1580
Query: 1025 XXXXXXPVIDSNILXXXXXXXXXXXXXXXXSLTAYSPTSPSYDQTRPSYILNSPSYILNS 846
S + +YSPTSPSY T PSY SPSY S
Sbjct: 1581 ---------TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 845 PSY 837
PSY
Sbjct: 1632 PSY 1634
Score = 46.6 bits (109), Expect(2) = e-119
Identities = 26/43 (60%), Positives = 26/43 (60%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSPSY SP SPTS YS TS S TSP TS SYSPT
Sbjct: 1637 TSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1679
Score = 60.5 bits (145), Expect(2) = 3e-11
Identities = 47/154 (30%), Positives = 60/154 (38%)
Frame = -1
Query: 1298 FSVTPSSHVTITPYHASFQDYSLSPNVRSSPITDASFSPYVGGMGTSSAAWSPLSSGYNS 1119
+S T S+ +P ++ S SP S T S+SP +S A+SP S Y+
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSP 1664
Query: 1118 SCRGYIPNTPSYRPSSLGNDPYLLGXXXXXXXXXXXXPVIDSNILXXXXXXXXXXXXXXX 939
+ Y P +PSY P+S P S
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSP-------------------TSPSYSPTSPSYSPTSPSYS 1705
Query: 938 XSLTAYSPTSPSYDQTRPSYILNSPSYILNSPSY 837
+ AYSPTSP Y T PSY SPSY SPSY
Sbjct: 1706 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1739
Score = 35.8 bits (81), Expect(2) = 3e-11
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSP+Y SP SPTS YS +S S +SP S YSP+
Sbjct: 1768 TSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPS 1810
>ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Glycine
max]
Length = 1827
Score = 409 bits (1051), Expect(2) = e-119
Identities = 222/363 (61%), Positives = 252/363 (69%), Gaps = 6/363 (1%)
Frame = -1
Query: 1907 LADMALQGIPDISKVFIKQEKGNRYHXXXXXXXXXXXEWMVDTEGVNLLAVMCHEDVDAK 1728
L +M L+GIPDI+KVFIK K ++ WM+DTEGVNLLAVMCHEDVDA
Sbjct: 1288 LTEMTLRGIPDINKVFIKNTKVQKFDENQGFKPNEE--WMLDTEGVNLLAVMCHEDVDAT 1345
Query: 1727 RTTSNHLIEVLEVLGIEAARRALLDELRKVLSFDGSYVNYRHLAVLCDTMTYRGHLMAIT 1548
RTTSNHLIEV+EVLGIEA RRALLDELR V+SFDGSYVNYRHLA+LCDTMTYRGHLMAIT
Sbjct: 1346 RTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT 1405
Query: 1547 RHGINRNDTGPLMRCSFEETVDILLGAAVYAETDHLRGVTENIMLGQLAPIGTGDCAMYL 1368
RHGINRNDTGP+MRCSFEETVDILL AAVYAETD+LRGVTENIMLGQLAPIGTG+CA+YL
Sbjct: 1406 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYL 1465
Query: 1367 NDQMLLKSVDLQLPSYFEGGGFDFSVTPS-SHVTITPYHASFQ--DYSLSPNVRSSPITD 1197
ND+ML +++LQLPSY + G DF +TP+ S ++ TPYH Y LSPN+R SP +D
Sbjct: 1466 NDEMLKNAIELQLPSYMD--GLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTSD 1523
Query: 1196 ASFSPYVGGMG---TSSAAWSPLSSGYNSSCRGYIPNTPSYRPSSLGNDPYLLGXXXXXX 1026
A FSPYVGGM TSS +SP S GY+ S GY P +P Y P+S G P G
Sbjct: 1524 AQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP--- 1580
Query: 1025 XXXXXXPVIDSNILXXXXXXXXXXXXXXXXSLTAYSPTSPSYDQTRPSYILNSPSYILNS 846
S + +YSPTSPSY T PSY SPSY S
Sbjct: 1581 ---------TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 845 PSY 837
PSY
Sbjct: 1632 PSY 1634
Score = 48.1 bits (113), Expect(2) = e-119
Identities = 27/43 (62%), Positives = 27/43 (62%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSPSY SP SPTS YS TS S TSPG TS SYSPT
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1707
Score = 59.3 bits (142), Expect(2) = 8e-11
Identities = 46/154 (29%), Positives = 59/154 (38%)
Frame = -1
Query: 1298 FSVTPSSHVTITPYHASFQDYSLSPNVRSSPITDASFSPYVGGMGTSSAAWSPLSSGYNS 1119
+S T S+ +P ++ S SP S T S+SP +S A+SP S Y+
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSP 1657
Query: 1118 SCRGYIPNTPSYRPSSLGNDPYLLGXXXXXXXXXXXXPVIDSNILXXXXXXXXXXXXXXX 939
+ Y P +PSY P+S P
Sbjct: 1658 TSPSYSPTSPSYSPTSPSYSP---------------------------------TSPSYS 1684
Query: 938 XSLTAYSPTSPSYDQTRPSYILNSPSYILNSPSY 837
+ AYSPTSP Y T PSY SPSY SPSY
Sbjct: 1685 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1718
Score = 35.4 bits (80), Expect(2) = 8e-11
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSP+Y SP SPTS YS +S S +SP S YSP+
Sbjct: 1747 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 1789
>emb|CAA21466.2| DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain
[Arabidopsis thaliana] gi|7270532|emb|CAB81489.1|
DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain
[Arabidopsis thaliana]
Length = 1840
Score = 406 bits (1043), Expect(2) = e-117
Identities = 220/363 (60%), Positives = 253/363 (69%), Gaps = 6/363 (1%)
Frame = -1
Query: 1907 LADMALQGIPDISKVFIKQEKGNRYHXXXXXXXXXXXEWMVDTEGVNLLAVMCHEDVDAK 1728
L +MAL+GIPDI+KVFIKQ + +R+ WM+DTEGVNLLAVMCHEDVD K
Sbjct: 1290 LTEMALRGIPDINKVFIKQVRKSRFDEEGGFKTSEE--WMLDTEGVNLLAVMCHEDVDPK 1347
Query: 1727 RTTSNHLIEVLEVLGIEAARRALLDELRKVLSFDGSYVNYRHLAVLCDTMTYRGHLMAIT 1548
RTTSNHLIE++EVLGIEA RRALLDELR V+SFDGSYVNYRHLA+LCDTMTYRGHLMAIT
Sbjct: 1348 RTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT 1407
Query: 1547 RHGINRNDTGPLMRCSFEETVDILLGAAVYAETDHLRGVTENIMLGQLAPIGTGDCAMYL 1368
RHGINRNDTGPLMRCSFEETVDILL AA YAETD LRGVTENIMLGQLAPIGTGDC +YL
Sbjct: 1408 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 1467
Query: 1367 NDQMLLKSVDLQLPSYFEGGGFDFSVTPS-SHVTITPYHASFQ--DYSLSPNVRSSPITD 1197
ND+ML +++LQLPSY + G +F +TP+ S V+ TPYH +Y LSPN+R SP++D
Sbjct: 1468 NDEMLKNAIELQLPSYMD--GLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSD 1525
Query: 1196 ASFSPYVGGMG---TSSAAWSPLSSGYNSSCRGYIPNTPSYRPSSLGNDPYLLGXXXXXX 1026
A FSPYVGGM +SS +SP S GY+ + GY P +P Y P+S G P
Sbjct: 1526 AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP---------- 1575
Query: 1025 XXXXXXPVIDSNILXXXXXXXXXXXXXXXXSLTAYSPTSPSYDQTRPSYILNSPSYILNS 846
S + +YSPTSPSY T PSY SPSY S
Sbjct: 1576 ---------TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 845 PSY 837
PSY
Sbjct: 1627 PSY 1629
Score = 46.2 bits (108), Expect(2) = e-117
Identities = 26/43 (60%), Positives = 26/43 (60%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSPSY SP SPTS YS TS S TSP TS SYSPT
Sbjct: 1625 TSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1667
Score = 59.7 bits (143), Expect(2) = 4e-11
Identities = 47/154 (30%), Positives = 60/154 (38%)
Frame = -1
Query: 1298 FSVTPSSHVTITPYHASFQDYSLSPNVRSSPITDASFSPYVGGMGTSSAAWSPLSSGYNS 1119
+S T S+ +P ++ S SP S T S+SP +S A+SP S Y+
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSP 1652
Query: 1118 SCRGYIPNTPSYRPSSLGNDPYLLGXXXXXXXXXXXXPVIDSNILXXXXXXXXXXXXXXX 939
+ Y P +PSY P+S P S
Sbjct: 1653 TSPAYSPTSPSYSPTSPSYSP-------------------TSPSYSPTSPSYSPTSPSYS 1693
Query: 938 XSLTAYSPTSPSYDQTRPSYILNSPSYILNSPSY 837
+ AYSPTSP Y T PSY SPSY SPSY
Sbjct: 1694 PTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSY 1727
Score = 36.2 bits (82), Expect(2) = 4e-11
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -2
Query: 838 TSPSYILNSPLNSPTSTIYSDTSLEDSETSPGCISTSASYSPT 710
TSP+Y SP SPTS YS +S S +SP S YSP+
Sbjct: 1756 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 1798