BLASTX nr result

ID: Coptis24_contig00001337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001337
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283714.1| PREDICTED: uncharacterized protein LOC100264...   176   6e-42
gb|ABK21069.1| unknown [Picea sitchensis] gi|116786524|gb|ABK241...   167   4e-39
ref|XP_003634215.1| PREDICTED: uncharacterized protein LOC100264...   163   7e-38
ref|NP_201151.2| SAP domain-containing protein [Arabidopsis thal...   162   1e-37
emb|CAN60381.1| hypothetical protein VITISV_028712 [Vitis vinifera]   162   1e-37

>ref|XP_002283714.1| PREDICTED: uncharacterized protein LOC100264568 isoform 1 [Vitis
           vinifera] gi|297734411|emb|CBI15658.3| unnamed protein
           product [Vitis vinifera]
          Length = 172

 Score =  176 bits (447), Expect = 6e-42
 Identities = 97/155 (62%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
 Frame = +3

Query: 213 ASKYLTNLPSRGLFXXXXXXXXXXNPGGMRVYVCDRDTSPPEEQLIKTDQMNILIRALKQ 392
           ASKYL NLPSRGLF          NPGGMRVY+CD +TSPPEEQLIKT+Q NILIR+L  
Sbjct: 18  ASKYLVNLPSRGLFSSTVISS---NPGGMRVYICDHETSPPEEQLIKTNQTNILIRSLTL 74

Query: 393 KNRRGDSSPKGVKGKATPDSAKGKRAAERPADGRVSAKRANITSNSRNSRQ-EGSSSRAS 569
           K ++GDSS K VKG    + +K KR AER  D R S+KRA   + S + R+  GSS+R S
Sbjct: 75  KKQKGDSSSKDVKGTTAAEVSK-KRTAERALDSRSSSKRAMTNAQSSSRREGSGSSTRTS 133

Query: 570 DKDYQGLTVEKLRAVLKERGLPTKGKKDELIARLR 674
           D+DYQ LTVE+LRA+LKERGL  KGKKDELIARL+
Sbjct: 134 DRDYQSLTVERLRALLKERGLSPKGKKDELIARLK 168


>gb|ABK21069.1| unknown [Picea sitchensis] gi|116786524|gb|ABK24142.1| unknown
           [Picea sitchensis] gi|116791460|gb|ABK25987.1| unknown
           [Picea sitchensis]
          Length = 186

 Score =  167 bits (423), Expect = 4e-39
 Identities = 85/159 (53%), Positives = 114/159 (71%)
 Frame = +3

Query: 210 GASKYLTNLPSRGLFXXXXXXXXXXNPGGMRVYVCDRDTSPPEEQLIKTDQMNILIRALK 389
           GA +YL +LPSRG F          +PGG+RVY+CD DTSPPE Q+IKTD  NILIR+L 
Sbjct: 17  GAGQYLKDLPSRGFFANAVPSS---SPGGLRVYICDHDTSPPENQIIKTDSTNILIRSLT 73

Query: 390 QKNRRGDSSPKGVKGKATPDSAKGKRAAERPADGRVSAKRANITSNSRNSRQEGSSSRAS 569
               +GDS  K V G+   +++KGKR AERPAD ++ AK+A+  SN  +S++EG S + S
Sbjct: 74  LNKSKGDSKLKDVNGRTAAENSKGKRPAERPADEKLIAKKASTGSNPGSSKKEGGSIQLS 133

Query: 570 DKDYQGLTVEKLRAVLKERGLPTKGKKDELIARLRGDKV 686
           D++ Q  TVE+LR++L+ERGL TKGKK+ELIARLR + +
Sbjct: 134 DREIQMSTVERLRSLLRERGLSTKGKKEELIARLRQESL 172


>ref|XP_003634215.1| PREDICTED: uncharacterized protein LOC100264568 isoform 2 [Vitis
           vinifera]
          Length = 181

 Score =  163 bits (412), Expect = 7e-38
 Identities = 95/169 (56%), Positives = 113/169 (66%), Gaps = 15/169 (8%)
 Frame = +3

Query: 213 ASKYLTNLPSRGLFXXXXXXXXXXNPGGMRVYVCDRDTSPP---------------EEQL 347
           ASKYL NLPSRGLF          NPGGMRVY+CD +TSPP               +EQL
Sbjct: 18  ASKYLVNLPSRGLFSSTVISS---NPGGMRVYICDHETSPPGWFMIPNFGILNFSMKEQL 74

Query: 348 IKTDQMNILIRALKQKNRRGDSSPKGVKGKATPDSAKGKRAAERPADGRVSAKRANITSN 527
           IKT+Q NILIR+L  K ++GDSS K VKG    + +K KR AER  D R S+KRA     
Sbjct: 75  IKTNQTNILIRSLTLKKQKGDSSSKDVKGTTAAEVSK-KRTAERALDSRSSSKRA----- 128

Query: 528 SRNSRQEGSSSRASDKDYQGLTVEKLRAVLKERGLPTKGKKDELIARLR 674
             N+++ GSS+R SD+DYQ LTVE+LRA+LKERGL  KGKKDELIARL+
Sbjct: 129 MTNAQRSGSSTRTSDRDYQSLTVERLRALLKERGLSPKGKKDELIARLK 177


>ref|NP_201151.2| SAP domain-containing protein [Arabidopsis thaliana]
           gi|48310085|gb|AAT41750.1| At5g63460 [Arabidopsis
           thaliana] gi|51971621|dbj|BAD44475.1| unknown protein
           [Arabidopsis thaliana] gi|51971875|dbj|BAD44602.1|
           unknown protein [Arabidopsis thaliana]
           gi|52627115|gb|AAU84684.1| At5g63460 [Arabidopsis
           thaliana] gi|332010369|gb|AED97752.1| SAP
           domain-containing protein [Arabidopsis thaliana]
          Length = 162

 Score =  162 bits (410), Expect = 1e-37
 Identities = 90/154 (58%), Positives = 110/154 (71%)
 Frame = +3

Query: 213 ASKYLTNLPSRGLFXXXXXXXXXXNPGGMRVYVCDRDTSPPEEQLIKTDQMNILIRALKQ 392
           ASK+L++LPSRG            NPG +RVY+C+ DTSPPE QLIKT+Q NILIR+L  
Sbjct: 16  ASKFLSDLPSRGFLSSTVVSS---NPGSLRVYICEHDTSPPEGQLIKTNQQNILIRSLLL 72

Query: 393 KNRRGDSSPKGVKGKATPDSAKGKRAAERPADGRVSAKRANITSNSRNSRQEGSSSRASD 572
           K ++G+SS K  KG  T +    KRAA R  D R SAKRA     +  SRQEGSSSR  +
Sbjct: 73  KKQKGESSSKDSKG--TAEDGPKKRAANRALDDRSSAKRA-----ANASRQEGSSSRTGE 125

Query: 573 KDYQGLTVEKLRAVLKERGLPTKGKKDELIARLR 674
           +D+Q LTVEKLRA+LKE+GLPTKG+KDELIARL+
Sbjct: 126 RDFQSLTVEKLRAMLKEKGLPTKGRKDELIARLK 159


>emb|CAN60381.1| hypothetical protein VITISV_028712 [Vitis vinifera]
          Length = 217

 Score =  162 bits (410), Expect = 1e-37
 Identities = 94/182 (51%), Positives = 115/182 (63%), Gaps = 5/182 (2%)
 Frame = +3

Query: 213 ASKYLTNLPSRGLFXXXXXXXXXXNPGGMRVYVCDRDTSPPEEQLIKTDQMNILIRALKQ 392
           ASKYL NLPSRGLF          NPGGMRVY+CD +TSPPEEQLIKT+Q NILIR+L  
Sbjct: 18  ASKYLVNLPSRGLFSSTVISS---NPGGMRVYICDHETSPPEEQLIKTNQTNILIRSLTL 74

Query: 393 KNRRGDSSPKGVKGKATPDSAKGKRAAERPADGRVSAKRANITSNSRNSRQE-----GSS 557
           K ++GDSS K VKG    + +K KR AER  D R S+KRA   + S + R +     GSS
Sbjct: 75  KKQKGDSSSKDVKGTTAAEVSK-KRTAERALDSRSSSKRAMTNAQSSSRRDDFVEGSGSS 133

Query: 558 SRASDKDYQGLTVEKLRAVLKERGLPTKGKKDELIARLRGDKVDSEA*FQGEEISPVIVC 737
           +R SD+DYQ LTVE+LRA+LKERGL  KGKK  + +         +    G  + P +V 
Sbjct: 134 TRTSDRDYQSLTVERLRALLKERGLSPKGKKVTIASNSLXSFNSPKWVLWGSNLGPWVVD 193

Query: 738 IH 743
            H
Sbjct: 194 TH 195


Top