BLASTX nr result

ID: Coptis24_contig00001330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001330
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15385.1| AGO6 [Solanum lycopersicum]                             57   2e-06

>gb|AFV15385.1| AGO6 [Solanum lycopersicum]
          Length = 903

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
 Frame = -1

Query: 147 VKRGDSSE---ETLETTVW-YLVLHWKFELSHSAYMSCLDVGKPKRPNRLPVE 1
           VK G S +   ETL+ TV+ Y   H   ELS S YM CLDVGKPKRPN LP+E
Sbjct: 329 VKNGGSPDDGGETLDITVYQYFTKHRNIELSSSVYMPCLDVGKPKRPNYLPLE 381


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