BLASTX nr result

ID: Coptis24_contig00001314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001314
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510628.1| conserved hypothetical protein [Ricinus comm...   454   e-125
ref|XP_002285932.1| PREDICTED: uncharacterized protein LOC100247...   450   e-124
ref|XP_002301925.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122
ref|NP_001240161.1| uncharacterized protein LOC100815202 [Glycin...   436   e-120
ref|XP_002306971.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120

>ref|XP_002510628.1| conserved hypothetical protein [Ricinus communis]
            gi|223551329|gb|EEF52815.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 348

 Score =  454 bits (1168), Expect = e-125
 Identities = 234/296 (79%), Positives = 261/296 (88%), Gaps = 2/296 (0%)
 Frame = -3

Query: 1121 KQNNNITRRLYLKARVFNSP-NDKSSDTSDTKPPNGSLPKGRREFLLEYVKNVQPEFMEL 945
            K+N +I  RL L+ R ++S  ND SS+++D+KPP+ SLPK R++ LLEYVKNVQPEFMEL
Sbjct: 53   KRNTSIKGRLGLRIRAYDSSKNDSSSNSADSKPPSSSLPKTRKDILLEYVKNVQPEFMEL 112

Query: 944  FVKKAPQQVVEAMRQTVSNMIGTLPPQFFAVTVTTVAENLAQLMYSVLMTGYMFRNAQFR 765
            FVK+APQQVV+AMRQTV+NMIGTLPPQFFAVTVTTVAENLAQLMYSV+MTGYMF+NAQ+R
Sbjct: 113  FVKRAPQQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYR 172

Query: 764  LDLQQSLDQVALPDVQEK-DAPDYAPGTQKKVTGEVIRWNNVSGPEKIDAVKYXXXXXXX 588
            ++LQQSL+QVALP+V+EK D PDYAPGTQK V+GEVIRWNNVSG EK+DA KY       
Sbjct: 173  MELQQSLEQVALPEVEEKKDVPDYAPGTQKNVSGEVIRWNNVSGAEKMDAKKYIELLEAE 232

Query: 587  XXXLNRQVGRKSVSGPNELLEYLKSLEPQNLKELTSSAGEDAVLAMNTFIKRLLAVSDPT 408
               LNRQVGRKS +G NELLEYLKSLEPQNLKELTSSAGEDAVLAMNTFIKRLLAV+D  
Sbjct: 233  IEELNRQVGRKSTNGQNELLEYLKSLEPQNLKELTSSAGEDAVLAMNTFIKRLLAVADQE 292

Query: 407  QMKTTATETSAPELAKLLYWLMVVGYGIRNIEVRFDMERVLGTTPKLAELPPGENI 240
            QMKT  TETSAPELAKLLYWLMVVGY IRNIEVRFDMERVLGT PKLAELPPGENI
Sbjct: 293  QMKTAITETSAPELAKLLYWLMVVGYSIRNIEVRFDMERVLGTPPKLAELPPGENI 348


>ref|XP_002285932.1| PREDICTED: uncharacterized protein LOC100247161 [Vitis vinifera]
            gi|302141665|emb|CBI18868.3| unnamed protein product
            [Vitis vinifera]
          Length = 333

 Score =  450 bits (1157), Expect = e-124
 Identities = 232/288 (80%), Positives = 254/288 (88%), Gaps = 2/288 (0%)
 Frame = -3

Query: 1097 RLYLKARVFNSPNDKSSDTSDTKPPNGSL-PKGRREFLLEYVKNVQPEFMELFVKKAPQQ 921
            R  L+A+ F SP + SS+ +D+KPPNGS  PK RR+ LLEYVKNVQPEFMELFVK+APQQ
Sbjct: 46   RFALRAQSFESPPNNSSNANDSKPPNGSFQPKSRRDILLEYVKNVQPEFMELFVKRAPQQ 105

Query: 920  VVEAMRQTVSNMIGTLPPQFFAVTVTTVAENLAQLMYSVLMTGYMFRNAQFRLDLQQSLD 741
            VV+AMRQTV+NMIGTLPPQFFAVTVTTVAENLAQLMYSV+MTGYMF+NAQ+RL+LQQSL+
Sbjct: 106  VVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLE 165

Query: 740  QVALPDVQEK-DAPDYAPGTQKKVTGEVIRWNNVSGPEKIDAVKYXXXXXXXXXXLNRQV 564
            Q ALP+VQEK D  DYAPGTQK V+GEVIRWNNVSG EKIDAVKY          LNRQV
Sbjct: 166  QAALPEVQEKKDDQDYAPGTQKNVSGEVIRWNNVSGLEKIDAVKYIELLEAEVEELNRQV 225

Query: 563  GRKSVSGPNELLEYLKSLEPQNLKELTSSAGEDAVLAMNTFIKRLLAVSDPTQMKTTATE 384
            GRKS +G NELLEYLKSLEPQNLK+LTSSAGED VLAMNTFIKRLLAVSDP QMKT+ TE
Sbjct: 226  GRKSANGQNELLEYLKSLEPQNLKDLTSSAGEDVVLAMNTFIKRLLAVSDPGQMKTSVTE 285

Query: 383  TSAPELAKLLYWLMVVGYGIRNIEVRFDMERVLGTTPKLAELPPGENI 240
            TSAPELAKLLYWLM+VGY IRNIEVRFDMERVLGT PKLAELPPGEN+
Sbjct: 286  TSAPELAKLLYWLMMVGYSIRNIEVRFDMERVLGTPPKLAELPPGENV 333


>ref|XP_002301925.1| predicted protein [Populus trichocarpa] gi|222843651|gb|EEE81198.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  444 bits (1141), Expect = e-122
 Identities = 230/293 (78%), Positives = 252/293 (86%), Gaps = 6/293 (2%)
 Frame = -3

Query: 1100 RRLYLKARVFNSP-NDKSSDTS---DTKPPNGSLPKGRREFLLEYVKNVQPEFMELFVKK 933
            RR   + + ++S  ND SS+ +   D KPPNG++PK RRE LLEYVKNVQPEFMELFVK+
Sbjct: 48   RRFGFRVKAYDSSKNDSSSNNNNSGDAKPPNGTMPKTRREILLEYVKNVQPEFMELFVKR 107

Query: 932  APQQVVEAMRQTVSNMIGTLPPQFFAVTVTTVAENLAQLMYSVLMTGYMFRNAQFRLDLQ 753
            +PQQVV+AMRQTV+NMIGTLPPQFFAVTVTTVAENLAQLMYSV+MTGYMF+NAQ+RLDLQ
Sbjct: 108  SPQQVVDAMRQTVANMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLDLQ 167

Query: 752  QSLDQVALPDVQE--KDAPDYAPGTQKKVTGEVIRWNNVSGPEKIDAVKYXXXXXXXXXX 579
            QSL+QVALPD QE  KD PDYAPGTQK V+GEVIRWNNVSGPE+IDA KY          
Sbjct: 168  QSLEQVALPDAQEEKKDEPDYAPGTQKNVSGEVIRWNNVSGPERIDAKKYIELLEAEIEE 227

Query: 578  LNRQVGRKSVSGPNELLEYLKSLEPQNLKELTSSAGEDAVLAMNTFIKRLLAVSDPTQMK 399
            LN QVGRKS +G NELLEYLKSLEP NLK+LTSSAGEDAVLAMNTFIKRLLAVS P QMK
Sbjct: 228  LNSQVGRKSANGQNELLEYLKSLEPLNLKDLTSSAGEDAVLAMNTFIKRLLAVSGPDQMK 287

Query: 398  TTATETSAPELAKLLYWLMVVGYGIRNIEVRFDMERVLGTTPKLAELPPGENI 240
            T+ TETSAPELAKLLYWLMVVGY IRNIEVRFDMERVLG  PKLAELPPGEN+
Sbjct: 288  TSVTETSAPELAKLLYWLMVVGYSIRNIEVRFDMERVLGAPPKLAELPPGENV 340


>ref|NP_001240161.1| uncharacterized protein LOC100815202 [Glycine max]
            gi|255641632|gb|ACU21088.1| unknown [Glycine max]
          Length = 345

 Score =  436 bits (1121), Expect = e-120
 Identities = 224/292 (76%), Positives = 253/292 (86%), Gaps = 6/292 (2%)
 Frame = -3

Query: 1097 RLYLKARVFNSPNDKSSDTS----DTKPPNGSLPKGRREFLLEYVKNVQPEFMELFVKKA 930
            R  L+   ++S N+ +S+ +    D+KPPNG+L K RRE LLEYVKNVQPEFMELFVK+A
Sbjct: 54   RFGLRVEAYDSSNNDTSNPASAGGDSKPPNGTLSKSRREILLEYVKNVQPEFMELFVKRA 113

Query: 929  PQQVVEAMRQTVSNMIGTLPPQFFAVTVTTVAENLAQLMYSVLMTGYMFRNAQFRLDLQQ 750
            PQQVV+AMRQTV+NMIGTLPPQFFAVT+TTVAENLAQLMYS++MTGYMF+NAQ+RL+LQ+
Sbjct: 114  PQQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQLMYSIMMTGYMFKNAQYRLELQE 173

Query: 749  SLDQV-ALPDVQEK-DAPDYAPGTQKKVTGEVIRWNNVSGPEKIDAVKYXXXXXXXXXXL 576
             L+QV ALPDVQ+K D PDYAPGTQK V+GEVIRWNNVSGPEKIDA KY          L
Sbjct: 174  GLEQVVALPDVQDKKDVPDYAPGTQKNVSGEVIRWNNVSGPEKIDAKKYIELLEAEIEEL 233

Query: 575  NRQVGRKSVSGPNELLEYLKSLEPQNLKELTSSAGEDAVLAMNTFIKRLLAVSDPTQMKT 396
            NRQVGR+S +G NELLEYLKSLEP+NLKELTSSAGED V AMNTFIKRLLAVSDP+QMKT
Sbjct: 234  NRQVGRQSSNGQNELLEYLKSLEPRNLKELTSSAGEDVVFAMNTFIKRLLAVSDPSQMKT 293

Query: 395  TATETSAPELAKLLYWLMVVGYGIRNIEVRFDMERVLGTTPKLAELPPGENI 240
            + TETSA ELAKLLYWLMVVGY IRNIEVR+DMERVLGT PKLAELPPGEN+
Sbjct: 294  SVTETSAAELAKLLYWLMVVGYSIRNIEVRYDMERVLGTPPKLAELPPGENV 345


>ref|XP_002306971.1| predicted protein [Populus trichocarpa] gi|222856420|gb|EEE93967.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  436 bits (1121), Expect = e-120
 Identities = 225/292 (77%), Positives = 248/292 (84%), Gaps = 6/292 (2%)
 Frame = -3

Query: 1097 RLYLKARVFNSPNDKSSDTS---DTKPPNGSL-PKGRREFLLEYVKNVQPEFMELFVKKA 930
            RL  + + ++S  D SS  +   D KPPNGS+ PK RRE LLEYVKNVQPEFMELFVK+A
Sbjct: 17   RLGFRVKAYDSSKDDSSSNNKSGDAKPPNGSVQPKNRREILLEYVKNVQPEFMELFVKRA 76

Query: 929  PQQVVEAMRQTVSNMIGTLPPQFFAVTVTTVAENLAQLMYSVLMTGYMFRNAQFRLDLQQ 750
            P QVV+AMRQTV+NMIGTLPPQFFAVT+TTVAENLAQLMYSV+MTGYMF+NAQ RL+LQQ
Sbjct: 77   PPQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQLMYSVMMTGYMFKNAQHRLELQQ 136

Query: 749  SLDQVALPDVQE--KDAPDYAPGTQKKVTGEVIRWNNVSGPEKIDAVKYXXXXXXXXXXL 576
            SL+QVALPD QE  KD PDYAPGTQK V+GEV+RWNNVSGPE+IDA KY          L
Sbjct: 137  SLEQVALPDAQEEKKDEPDYAPGTQKNVSGEVLRWNNVSGPERIDAKKYIELLEAEIEEL 196

Query: 575  NRQVGRKSVSGPNELLEYLKSLEPQNLKELTSSAGEDAVLAMNTFIKRLLAVSDPTQMKT 396
            N QVGRK+ +G NELLEYLKSLEPQNLK+LTSSAGED VLAMNTFIKRLLAVS P QMKT
Sbjct: 197  NSQVGRKTANGQNELLEYLKSLEPQNLKDLTSSAGEDVVLAMNTFIKRLLAVSGPDQMKT 256

Query: 395  TATETSAPELAKLLYWLMVVGYGIRNIEVRFDMERVLGTTPKLAELPPGENI 240
            + TETSAPELAKLLYWLMVVGY +RNIEVRFDMERVLG  PKLAELPPGEN+
Sbjct: 257  SVTETSAPELAKLLYWLMVVGYSVRNIEVRFDMERVLGVPPKLAELPPGENV 308


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