BLASTX nr result

ID: Coptis24_contig00001313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001313
         (1788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31358.3| unnamed protein product [Vitis vinifera]              502   e-139
ref|XP_002279511.1| PREDICTED: uncharacterized protein At1g22800...   502   e-139
ref|XP_002528044.1| conserved hypothetical protein [Ricinus comm...   476   e-132
gb|ACN31960.1| unknown [Zea mays] gi|413916686|gb|AFW56618.1| hy...   471   e-130
ref|NP_001143495.1| uncharacterized protein LOC100276173 [Zea ma...   471   e-130

>emb|CBI31358.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  502 bits (1292), Expect = e-139
 Identities = 244/317 (76%), Positives = 282/317 (88%), Gaps = 4/317 (1%)
 Frame = -2

Query: 1481 FAPLSTESLDGFP----KIFDRHLKCKQRDRAAWLMQSKDPFVDAVAENMLDRLEDCKRT 1314
            +  LST++ DGF     KIFDRHLK KQRDRAAWL   KDP VD VAEN+LDRLEDCK+ 
Sbjct: 31   YGSLSTDNGDGFQSSRVKIFDRHLKRKQRDRAAWLACPKDPLVDTVAENLLDRLEDCKKA 90

Query: 1313 FPTALCLGGSLEAIRRLQSGRGGIQKLIMMDPSSEIIKLCESKESDMPNDNIETSFVVGD 1134
            FPTALCLGGSLEAIRRL  GRG I+KLIMMD S +++KLC   E D+PN++IETSFVVGD
Sbjct: 91   FPTALCLGGSLEAIRRLLRGRGAIEKLIMMDTSYDMVKLCRDAEQDVPNESIETSFVVGD 150

Query: 1133 EEFLPLEENSIDMVISCLGLHWTNDLPGAMIQCRLALKPDGLFLAAILGGETLKELRVSC 954
            EEFLP++E+S+D+VISCLGLHWTNDLPGAMIQCRLALKPD LFLAAILGGETLKELR++C
Sbjct: 151  EEFLPIKESSLDLVISCLGLHWTNDLPGAMIQCRLALKPDCLFLAAILGGETLKELRIAC 210

Query: 953  TIAQIEREGGVSPRLSPLAQVRDAGNLLTRAGLTLPGVDVDEYTVRYDSALELIEHLRAM 774
            T+AQ+EREGG+SPR+SPLAQVRDAGNLLTRAG TLP VDVDEYTV+Y SAL+LIEHLR+M
Sbjct: 211  TVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDEYTVKYRSALDLIEHLRSM 270

Query: 773  GETNALFERSKILKRDTALATAAVYQTMFGAEDGTVPATFQVMYMTGWKEHPSQQKPKQR 594
            GETNAL ++S ILKR+TALATAAVY +MF  EDGT+PATFQV+YMTGW+EH SQQK K+R
Sbjct: 271  GETNALLQKSNILKRETALATAAVYDSMFAGEDGTIPATFQVIYMTGWREHSSQQKAKRR 330

Query: 593  GSATISFKDIQKEFGTD 543
            GSAT+SF+DIQK+FG+D
Sbjct: 331  GSATVSFQDIQKQFGSD 347


>ref|XP_002279511.1| PREDICTED: uncharacterized protein At1g22800 [Vitis vinifera]
          Length = 339

 Score =  502 bits (1292), Expect = e-139
 Identities = 244/317 (76%), Positives = 282/317 (88%), Gaps = 4/317 (1%)
 Frame = -2

Query: 1481 FAPLSTESLDGFP----KIFDRHLKCKQRDRAAWLMQSKDPFVDAVAENMLDRLEDCKRT 1314
            +  LST++ DGF     KIFDRHLK KQRDRAAWL   KDP VD VAEN+LDRLEDCK+ 
Sbjct: 22   YGSLSTDNGDGFQSSRVKIFDRHLKRKQRDRAAWLACPKDPLVDTVAENLLDRLEDCKKA 81

Query: 1313 FPTALCLGGSLEAIRRLQSGRGGIQKLIMMDPSSEIIKLCESKESDMPNDNIETSFVVGD 1134
            FPTALCLGGSLEAIRRL  GRG I+KLIMMD S +++KLC   E D+PN++IETSFVVGD
Sbjct: 82   FPTALCLGGSLEAIRRLLRGRGAIEKLIMMDTSYDMVKLCRDAEQDVPNESIETSFVVGD 141

Query: 1133 EEFLPLEENSIDMVISCLGLHWTNDLPGAMIQCRLALKPDGLFLAAILGGETLKELRVSC 954
            EEFLP++E+S+D+VISCLGLHWTNDLPGAMIQCRLALKPD LFLAAILGGETLKELR++C
Sbjct: 142  EEFLPIKESSLDLVISCLGLHWTNDLPGAMIQCRLALKPDCLFLAAILGGETLKELRIAC 201

Query: 953  TIAQIEREGGVSPRLSPLAQVRDAGNLLTRAGLTLPGVDVDEYTVRYDSALELIEHLRAM 774
            T+AQ+EREGG+SPR+SPLAQVRDAGNLLTRAG TLP VDVDEYTV+Y SAL+LIEHLR+M
Sbjct: 202  TVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDEYTVKYRSALDLIEHLRSM 261

Query: 773  GETNALFERSKILKRDTALATAAVYQTMFGAEDGTVPATFQVMYMTGWKEHPSQQKPKQR 594
            GETNAL ++S ILKR+TALATAAVY +MF  EDGT+PATFQV+YMTGW+EH SQQK K+R
Sbjct: 262  GETNALLQKSNILKRETALATAAVYDSMFAGEDGTIPATFQVIYMTGWREHSSQQKAKRR 321

Query: 593  GSATISFKDIQKEFGTD 543
            GSAT+SF+DIQK+FG+D
Sbjct: 322  GSATVSFQDIQKQFGSD 338


>ref|XP_002528044.1| conserved hypothetical protein [Ricinus communis]
            gi|223532574|gb|EEF34362.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 336

 Score =  476 bits (1226), Expect = e-132
 Identities = 234/298 (78%), Positives = 268/298 (89%)
 Frame = -2

Query: 1442 KIFDRHLKCKQRDRAAWLMQSKDPFVDAVAENMLDRLEDCKRTFPTALCLGGSLEAIRRL 1263
            KIFDRHLK  QRDRAAWLM+  D FV+AVA+N+LDRLEDCK+TFP+AL LGGSL+AIRR 
Sbjct: 37   KIFDRHLKRVQRDRAAWLMRPNDSFVNAVADNLLDRLEDCKKTFPSALFLGGSLDAIRRS 96

Query: 1262 QSGRGGIQKLIMMDPSSEIIKLCESKESDMPNDNIETSFVVGDEEFLPLEENSIDMVISC 1083
              GRG I+KLIMMD S ++IKLC+    D  N+NIETSFVVGDEEFLP++E+S+D+VISC
Sbjct: 97   LRGRGSIEKLIMMDTSYDMIKLCKDAHYDA-NENIETSFVVGDEEFLPVKESSLDLVISC 155

Query: 1082 LGLHWTNDLPGAMIQCRLALKPDGLFLAAILGGETLKELRVSCTIAQIEREGGVSPRLSP 903
            LGLHWTNDLPGAMIQC+LALKPDGLFLAAILGGETLKELR++CT AQIEREGG+SPR+SP
Sbjct: 156  LGLHWTNDLPGAMIQCKLALKPDGLFLAAILGGETLKELRIACTAAQIEREGGISPRVSP 215

Query: 902  LAQVRDAGNLLTRAGLTLPGVDVDEYTVRYDSALELIEHLRAMGETNALFERSKILKRDT 723
            LAQVRDAGNLLTRAG TLPGVDVDEY VRY SALELIEHLRAMGET+AL +R+ IL+R T
Sbjct: 216  LAQVRDAGNLLTRAGFTLPGVDVDEYVVRYKSALELIEHLRAMGETSALLQRNNILERGT 275

Query: 722  ALATAAVYQTMFGAEDGTVPATFQVMYMTGWKEHPSQQKPKQRGSATISFKDIQKEFG 549
            ALA AA+Y +MF AEDGT+PATFQV+YMTGW+EHPSQQK K+RGSATISF+DI K+FG
Sbjct: 276  ALAAAAIYDSMFAAEDGTIPATFQVIYMTGWREHPSQQKAKRRGSATISFQDIHKQFG 333


>gb|ACN31960.1| unknown [Zea mays] gi|413916686|gb|AFW56618.1| hypothetical protein
            ZEAMMB73_760336 [Zea mays]
          Length = 343

 Score =  471 bits (1212), Expect = e-130
 Identities = 234/338 (69%), Positives = 279/338 (82%), Gaps = 11/338 (3%)
 Frame = -2

Query: 1529 SEAKMRGLSFLRKRRG-----------FAPLSTESLDGFPKIFDRHLKCKQRDRAAWLMQ 1383
            S A  R L  LR R G            AP   +   G  KIFDR LK + RDRAAW+M+
Sbjct: 3    SSAAARRLLLLRHRHGNLLPKRHFSSSSAPDGLDDGGGRVKIFDRDLKRRHRDRAAWVMR 62

Query: 1382 SKDPFVDAVAENMLDRLEDCKRTFPTALCLGGSLEAIRRLQSGRGGIQKLIMMDPSSEII 1203
              D  VDAVAEN+LDRLEDC++ FP+ALCLGGS  A+RRL  GRGGI++LIMMD S++++
Sbjct: 63   ETDGLVDAVAENLLDRLEDCRKAFPSALCLGGSAGAVRRLLRGRGGIERLIMMDMSADMV 122

Query: 1202 KLCESKESDMPNDNIETSFVVGDEEFLPLEENSIDMVISCLGLHWTNDLPGAMIQCRLAL 1023
            K     E+    D  ET FV+GDEEFLP++E+S D+++SCLGLHWTNDLPGAMIQCRLAL
Sbjct: 123  KKWRESEN-ATGDGPETHFVIGDEEFLPIKESSQDLIMSCLGLHWTNDLPGAMIQCRLAL 181

Query: 1022 KPDGLFLAAILGGETLKELRVSCTIAQIEREGGVSPRLSPLAQVRDAGNLLTRAGLTLPG 843
            +PDGLFLAAILGGETLKELR++CT+AQ+EREGG+SPR+SPLAQVRDAGNLLTRAG TLPG
Sbjct: 182  QPDGLFLAAILGGETLKELRIACTVAQMEREGGISPRMSPLAQVRDAGNLLTRAGFTLPG 241

Query: 842  VDVDEYTVRYDSALELIEHLRAMGETNALFERSKILKRDTALATAAVYQTMFGAEDGTVP 663
            VDVD+YTVRY++ALEL+EHLRAMGETNALF+R+ +LKRDTALATAA+YQ+MFG EDG++P
Sbjct: 242  VDVDQYTVRYNNALELVEHLRAMGETNALFQRNPVLKRDTALATAAIYQSMFGLEDGSIP 301

Query: 662  ATFQVMYMTGWKEHPSQQKPKQRGSATISFKDIQKEFG 549
            ATFQV+YMTGW+EHPSQQK K+RGSATISF DIQK+FG
Sbjct: 302  ATFQVIYMTGWREHPSQQKAKRRGSATISFGDIQKQFG 339


>ref|NP_001143495.1| uncharacterized protein LOC100276173 [Zea mays]
            gi|195621470|gb|ACG32565.1| hypothetical protein [Zea
            mays]
          Length = 343

 Score =  471 bits (1212), Expect = e-130
 Identities = 235/338 (69%), Positives = 278/338 (82%), Gaps = 11/338 (3%)
 Frame = -2

Query: 1529 SEAKMRGLSFLRKRRGF-----------APLSTESLDGFPKIFDRHLKCKQRDRAAWLMQ 1383
            S A  R L  LR R G            AP   +   G  KIFDR LK + RDRAAW M+
Sbjct: 3    SSAAARRLLLLRHRHGHLLPKRHFSSSSAPDGLDDGGGRVKIFDRDLKRRHRDRAAWAMR 62

Query: 1382 SKDPFVDAVAENMLDRLEDCKRTFPTALCLGGSLEAIRRLQSGRGGIQKLIMMDPSSEII 1203
              D  VDAVAEN+LDRLEDC++ FP+ALCLGGS  A+RRL  GRGGI++LIMMD S++++
Sbjct: 63   ETDGLVDAVAENLLDRLEDCRKAFPSALCLGGSAGAVRRLLRGRGGIERLIMMDMSADMV 122

Query: 1202 KLCESKESDMPNDNIETSFVVGDEEFLPLEENSIDMVISCLGLHWTNDLPGAMIQCRLAL 1023
            K     E+    D  ET FV+GDEEFLP++E+S D+++SCLGLHWTNDLPGAMIQCRLAL
Sbjct: 123  KKWRESEN-ATGDGPETHFVIGDEEFLPIKESSQDLIMSCLGLHWTNDLPGAMIQCRLAL 181

Query: 1022 KPDGLFLAAILGGETLKELRVSCTIAQIEREGGVSPRLSPLAQVRDAGNLLTRAGLTLPG 843
            +PDGLFLAAILGGETLKELR++CTIAQ+EREGG+SPR+SPLAQVRDAGNLLTRAG TLPG
Sbjct: 182  QPDGLFLAAILGGETLKELRIACTIAQMEREGGISPRMSPLAQVRDAGNLLTRAGFTLPG 241

Query: 842  VDVDEYTVRYDSALELIEHLRAMGETNALFERSKILKRDTALATAAVYQTMFGAEDGTVP 663
            VDVD+YTVRY++ALEL+EHLRAMGETNALF+R+ +LKRDTALATAA+YQ+MFG EDG++P
Sbjct: 242  VDVDQYTVRYNNALELVEHLRAMGETNALFQRNPVLKRDTALATAAIYQSMFGLEDGSIP 301

Query: 662  ATFQVMYMTGWKEHPSQQKPKQRGSATISFKDIQKEFG 549
            ATFQV+YMTGW+EHPSQQK K+RGSATISF DIQK+FG
Sbjct: 302  ATFQVIYMTGWREHPSQQKAKRRGSATISFGDIQKQFG 339


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