BLASTX nr result

ID: Coptis24_contig00001306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001306
         (1907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524039.1| PREDICTED: transmembrane protein 184C-like [...   715   0.0  
ref|XP_002282426.1| PREDICTED: transmembrane protein 184C [Vitis...   713   0.0  
ref|XP_003604097.1| Transmembrane protein 184C [Medicago truncat...   710   0.0  
ref|XP_003526798.1| PREDICTED: transmembrane protein 184C-like [...   706   0.0  
ref|XP_002312807.1| predicted protein [Populus trichocarpa] gi|2...   705   0.0  

>ref|XP_003524039.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 486

 Score =  715 bits (1845), Expect = 0.0
 Identities = 353/471 (74%), Positives = 389/471 (82%), Gaps = 4/471 (0%)
 Frame = -2

Query: 1798 PSWXXXXXXXXXXXXXXLSAYLVFEHLSTYKNPEEQKFLICVILMVPCYSVESFISLIDP 1619
            P+W              LS YL+FEHLS YKNPEEQKFLI VILMVPCYS ESF+SL++P
Sbjct: 16   PAWATLIAAAFLLLTLALSMYLLFEHLSAYKNPEEQKFLIGVILMVPCYSFESFVSLVNP 75

Query: 1618 SISVYCEILRDCYEALAMYSFGRYLVACLGGEERAIEFMKREGRTNPKTPLLQHSS--EK 1445
            SISV CEILRDCYE+ AMY FGRYLVACLGG+ER ++FM+R+ R + KTPLLQHSS  +K
Sbjct: 76   SISVDCEILRDCYESFAMYCFGRYLVACLGGDERTVQFMERQSRLSVKTPLLQHSSSSDK 135

Query: 1444 GIIKHPFPMKYFVKPWKLGQWFYQVVKFGIVQYMLIKTFTAILAVILEAFGVYCEGEFNL 1265
              + HPFP+ YF+KPWKLG+ FYQV+KFGIVQYML K FTAILAVILEAFGVYCEGEF +
Sbjct: 136  ATVNHPFPLNYFLKPWKLGRAFYQVIKFGIVQYMLTKAFTAILAVILEAFGVYCEGEFKV 195

Query: 1264 KCGYAYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQGVAIA 1085
             CGY Y+AVVLNFSQSWALYCLVQFYTVTKDEL HIKPLAKFLTFKSIVFLTWWQGVAIA
Sbjct: 196  GCGYPYMAVVLNFSQSWALYCLVQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIA 255

Query: 1084 LFCDLDLLKSPIAQGLQFKSSIQDFIICIEMAVACIVHLYVFPAKPYELLGDRFTGNFSV 905
            L     L KSPIAQGLQFKSS+QDFIICIEM +A IVHLYVFPAKPYE +GDRF+G+ SV
Sbjct: 256  LLSTFGLFKSPIAQGLQFKSSVQDFIICIEMGIASIVHLYVFPAKPYERMGDRFSGSVSV 315

Query: 904  LGDYSADCPLDPDEIRDSERPTKIRLPQPDVDVKSGMKIRESVKDVVFGSGGYIVKDVKF 725
            LGDYSADCPLDPDEIRDSERPTK+RLP PDVD KSGM IRESV DVV G GGYIVKDVKF
Sbjct: 316  LGDYSADCPLDPDEIRDSERPTKLRLPTPDVDTKSGMTIRESVCDVVIGGGGYIVKDVKF 375

Query: 724  TVNQAVDPVEKGFTRFNEKLHKISENIKRHDKEKRKTKDDSCI--GSPTRKVIRGIDDPL 551
            TV+QAV+PVEKG TRFNEKLH+ISENIK+HDK+ R+TKDDSCI   SP R+VIRGIDDPL
Sbjct: 376  TVHQAVEPVEKGITRFNEKLHRISENIKKHDKDGRRTKDDSCIATSSPARRVIRGIDDPL 435

Query: 550  LNGSISDSGVSRSKKHRRKXXXXXXXXXXXXXXXXXXXXXQVRGRRWVTKE 398
            LNGS+SDSG+SR KKHRRK                     Q+RGRRWVTKE
Sbjct: 436  LNGSVSDSGMSRGKKHRRKSGYTSAEGGGESSSEQSFGGYQIRGRRWVTKE 486


>ref|XP_002282426.1| PREDICTED: transmembrane protein 184C [Vitis vinifera]
            gi|297744492|emb|CBI37754.3| unnamed protein product
            [Vitis vinifera]
          Length = 482

 Score =  713 bits (1840), Expect = 0.0
 Identities = 347/468 (74%), Positives = 390/468 (83%)
 Frame = -2

Query: 1801 TPSWXXXXXXXXXXXXXXLSAYLVFEHLSTYKNPEEQKFLICVILMVPCYSVESFISLID 1622
            TP+W              LS YL+FEHLS+YKNPEEQKFLI VILMVPCY++ESF+SL++
Sbjct: 16   TPTWASLVAGVFVLISLSLSMYLLFEHLSSYKNPEEQKFLIGVILMVPCYAIESFVSLVN 75

Query: 1621 PSISVYCEILRDCYEALAMYSFGRYLVACLGGEERAIEFMKREGRTNPKTPLLQHSSEKG 1442
            PSISV C ILRDCYEA AMY FGRYLVACLGGEER IEFM+R+GR + KTPLL+++ EKG
Sbjct: 76   PSISVDCAILRDCYEAFAMYCFGRYLVACLGGEERTIEFMERQGRASSKTPLLENNCEKG 135

Query: 1441 IIKHPFPMKYFVKPWKLGQWFYQVVKFGIVQYMLIKTFTAILAVILEAFGVYCEGEFNLK 1262
             +KHPFPM YF+KPWKLGQWFYQV+K GIVQYM+IK+ +AILAVILEAF +YCEG+F   
Sbjct: 136  TVKHPFPMNYFLKPWKLGQWFYQVIKIGIVQYMIIKSLSAILAVILEAFSLYCEGDFKWG 195

Query: 1261 CGYAYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQGVAIAL 1082
            CGY YIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQGVAIAL
Sbjct: 196  CGYPYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQGVAIAL 255

Query: 1081 FCDLDLLKSPIAQGLQFKSSIQDFIICIEMAVACIVHLYVFPAKPYELLGDRFTGNFSVL 902
              DL L KS IAQGLQ KSS+QDFIICIEM +A IVHLYVFPAKPYEL+GDR +G+ SVL
Sbjct: 256  LYDLGLFKSAIAQGLQSKSSVQDFIICIEMGIASIVHLYVFPAKPYELMGDRLSGSVSVL 315

Query: 901  GDYSADCPLDPDEIRDSERPTKIRLPQPDVDVKSGMKIRESVKDVVFGSGGYIVKDVKFT 722
            GDY++  PLDPDE+RDSERPTK+RLP PD+D++SGM I ESV+DV  G GGYIV DVKFT
Sbjct: 316  GDYASTDPLDPDEVRDSERPTKLRLPHPDIDIRSGMTIGESVRDVFIGGGGYIVNDVKFT 375

Query: 721  VNQAVDPVEKGFTRFNEKLHKISENIKRHDKEKRKTKDDSCIGSPTRKVIRGIDDPLLNG 542
            VNQAV+PVEKG T+FN+KLHKIS+NIKRHDKEKRKTKDDSCI +PTR+VIRGIDDPLLNG
Sbjct: 376  VNQAVEPVEKGITKFNQKLHKISQNIKRHDKEKRKTKDDSCI-TPTRRVIRGIDDPLLNG 434

Query: 541  SISDSGVSRSKKHRRKXXXXXXXXXXXXXXXXXXXXXQVRGRRWVTKE 398
            S SDSGVSR KKHRRK                     Q+RG RWVTK+
Sbjct: 435  SFSDSGVSRGKKHRRKSGYTSGESGGESSSDQSYSAYQIRGGRWVTKD 482


>ref|XP_003604097.1| Transmembrane protein 184C [Medicago truncatula]
            gi|355493145|gb|AES74348.1| Transmembrane protein 184C
            [Medicago truncatula]
          Length = 480

 Score =  710 bits (1833), Expect = 0.0
 Identities = 352/475 (74%), Positives = 389/475 (81%), Gaps = 5/475 (1%)
 Frame = -2

Query: 1807 YFTPSWXXXXXXXXXXXXXXLSAYLVFEHLSTYKNPEEQKFLICVILMVPCYSVESFISL 1628
            Y  P W              LS YL+ EHLS+YKNPEEQKFLI VILMVPCYS+ESF+SL
Sbjct: 6    YSPPVWATVIGAAFLLTTVTLSLYLLLEHLSSYKNPEEQKFLIGVILMVPCYSIESFVSL 65

Query: 1627 IDPSISVYCEILRDCYEALAMYSFGRYLVACLGGEERAIEFMKREGRTNPKTPLLQH--- 1457
            ++PSISV C ILRDCYE+ AMY FGRYLVACLGGE+R ++FM++EGR   KTPLL+H   
Sbjct: 66   VNPSISVDCAILRDCYESFAMYCFGRYLVACLGGEDRTLDFMEKEGRATFKTPLLRHYHS 125

Query: 1456 SSEKGIIKHPFPMKYFVKPWKLGQWFYQVVKFGIVQYMLIKTFTAILAVILEAFGVYCEG 1277
            S   GI+KHPFP+KYF+KPW LG  FYQ+VKFGIVQYM+IK+FTAILAVILEAFGVYCEG
Sbjct: 126  SHSPGIVKHPFPIKYFLKPWILGPRFYQIVKFGIVQYMIIKSFTAILAVILEAFGVYCEG 185

Query: 1276 EFNLKCGYAYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQG 1097
            EF L CGY Y+AVVLNFSQSWALYCLVQFYTVTKDEL HIKPLAKFLTFKSIVFLTWWQG
Sbjct: 186  EFKLGCGYPYVAVVLNFSQSWALYCLVQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQG 245

Query: 1096 VAIALFCDLDLLKSPIAQGLQFKSSIQDFIICIEMAVACIVHLYVFPAKPYELLGDRFTG 917
            VAIAL     L KSPIAQGLQFKSS+QDFIICIEM +A IVHLYVFPAKPYEL+GDR  G
Sbjct: 246  VAIALLYTFGLFKSPIAQGLQFKSSVQDFIICIEMGIASIVHLYVFPAKPYELMGDRLPG 305

Query: 916  NFSVLGDYSADCPLDPDEIRDSERPTKIRLPQPDVDVKSGMKIRESVKDVVFGSGGYIVK 737
            + SVLGDYSADCPLDPDEIRDSERPTK+RLP PDVD KSGM IRESV+DVV G GGYIVK
Sbjct: 306  SVSVLGDYSADCPLDPDEIRDSERPTKLRLPAPDVDAKSGMTIRESVRDVVIGGGGYIVK 365

Query: 736  DVKFTVNQAVDPVEKGFTRFNEKLHKISENIKRHDKEKRKTKDDSCI--GSPTRKVIRGI 563
            DVKFTV+QAV+PVEKG TRFNEKL++IS+NIK+HDK+KR+ KDDSCI   SP R+VIRGI
Sbjct: 366  DVKFTVHQAVEPVEKGITRFNEKLYRISQNIKKHDKDKRRIKDDSCIVSSSPARRVIRGI 425

Query: 562  DDPLLNGSISDSGVSRSKKHRRKXXXXXXXXXXXXXXXXXXXXXQVRGRRWVTKE 398
            DDPLLNGS+SDSG+SR KKHRRK                     QVRG RWVTKE
Sbjct: 426  DDPLLNGSVSDSGMSRGKKHRRKSGYTSGESGGESSSDQTYGGYQVRGHRWVTKE 480


>ref|XP_003526798.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 492

 Score =  706 bits (1823), Expect = 0.0
 Identities = 349/470 (74%), Positives = 386/470 (82%), Gaps = 3/470 (0%)
 Frame = -2

Query: 1798 PSWXXXXXXXXXXXXXXLSAYLVFEHLSTYKNPEEQKFLICVILMVPCYSVESFISLIDP 1619
            P+W              LS YL+FEHLS YKNPEEQKFLI VILMVPCYS ESF+SL++P
Sbjct: 23   PAWATLIAAAFLLLTLTLSMYLLFEHLSAYKNPEEQKFLIGVILMVPCYSFESFVSLVNP 82

Query: 1618 SISVYCEILRDCYEALAMYSFGRYLVACLGGEERAIEFMKREGRTNPKTPLLQ-HSSEKG 1442
            SISV CEILRDCYE+ AMY FGRYLVACLGG+ER ++FM+R+ R + K PLLQ  SS+K 
Sbjct: 83   SISVDCEILRDCYESFAMYCFGRYLVACLGGDERTVQFMERQARLSVKAPLLQLSSSDKA 142

Query: 1441 IIKHPFPMKYFVKPWKLGQWFYQVVKFGIVQYMLIKTFTAILAVILEAFGVYCEGEFNLK 1262
            I+ HPFP+ YF+KPWKLG+ FYQ+VKFGIVQYML K FTAILAVILEAFGVYCEGEF   
Sbjct: 143  IVNHPFPLNYFLKPWKLGRAFYQIVKFGIVQYMLTKAFTAILAVILEAFGVYCEGEFKAG 202

Query: 1261 CGYAYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQGVAIAL 1082
            CGY Y+AVVLNFSQSWALYCLVQFYTVTK+EL HIKPLAKFLTFKSIVFLTWWQGVAIAL
Sbjct: 203  CGYPYMAVVLNFSQSWALYCLVQFYTVTKEELAHIKPLAKFLTFKSIVFLTWWQGVAIAL 262

Query: 1081 FCDLDLLKSPIAQGLQFKSSIQDFIICIEMAVACIVHLYVFPAKPYELLGDRFTGNFSVL 902
                 L KSPIAQGLQFKSS+QDFIICIEM +A IVHLYVFPAKPYE +GDRF+G+ SVL
Sbjct: 263  LSTFGLFKSPIAQGLQFKSSVQDFIICIEMGIASIVHLYVFPAKPYERMGDRFSGSVSVL 322

Query: 901  GDYSADCPLDPDEIRDSERPTKIRLPQPDVDVKSGMKIRESVKDVVFGSGGYIVKDVKFT 722
            GDYSADCPLDPDEIRDSERPTK+RLP PDVD KSGM IRESV+DVV G GGYIVKDVKFT
Sbjct: 323  GDYSADCPLDPDEIRDSERPTKLRLPTPDVDTKSGMTIRESVRDVVIGGGGYIVKDVKFT 382

Query: 721  VNQAVDPVEKGFTRFNEKLHKISENIKRHDKEKRKTKDDSCI--GSPTRKVIRGIDDPLL 548
            V+QAV+PVEKG TRFNEKLH+ISEN+K+HDK  R+TKDDSCI   SP R+VIRGIDDPLL
Sbjct: 383  VHQAVEPVEKGITRFNEKLHRISENMKKHDKNGRRTKDDSCIASSSPARRVIRGIDDPLL 442

Query: 547  NGSISDSGVSRSKKHRRKXXXXXXXXXXXXXXXXXXXXXQVRGRRWVTKE 398
            NGS+SDSG+ R KKHRRK                     Q+RGRRWVTKE
Sbjct: 443  NGSVSDSGMLRVKKHRRKSGYTSAESGGESSSDQGFGGYQIRGRRWVTKE 492


>ref|XP_002312807.1| predicted protein [Populus trichocarpa] gi|222849215|gb|EEE86762.1|
            predicted protein [Populus trichocarpa]
          Length = 488

 Score =  705 bits (1819), Expect = 0.0
 Identities = 346/475 (72%), Positives = 391/475 (82%), Gaps = 4/475 (0%)
 Frame = -2

Query: 1810 TYFTPSWXXXXXXXXXXXXXXLSAYLVFEHLSTYKNPEEQKFLICVILMVPCYSVESFIS 1631
            T+  P W               S YL+FEHLS Y+NPEEQKFLI VILMVPCY+VESF+S
Sbjct: 14   TFSIPLWDTLIAGAFVLVSLSSSFYLLFEHLSAYRNPEEQKFLIGVILMVPCYAVESFVS 73

Query: 1630 LIDPSISVYCEILRDCYEALAMYSFGRYLVACLGGEERAIEFMKREGRTNPKTPLLQHSS 1451
            L+DPSISV  EILRDCYE+ AMY FGRYLVACLGGEER IEF++REGR++ K PLL+H+ 
Sbjct: 74   LLDPSISVDIEILRDCYESFAMYCFGRYLVACLGGEERTIEFLEREGRSSSKAPLLEHNH 133

Query: 1450 EKGIIKHPFPMKYFVKPWKLGQWFYQVVKFGIVQYMLIKTFTAILAVILEAFGVYCEGEF 1271
            E+GIIKHPFPM Y  KPWKLGQWFYQVVKFGIVQYMLIK+ TA+LAV+LEAFGVYCEG+F
Sbjct: 134  ERGIIKHPFPMNYIFKPWKLGQWFYQVVKFGIVQYMLIKSLTAVLAVLLEAFGVYCEGDF 193

Query: 1270 NLKCGYAYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQGVA 1091
             L+CGY Y+AVVLNFSQSWALYCLVQFYT  KDEL HIKPL KFLTFKSIVFLTWWQGVA
Sbjct: 194  KLRCGYPYMAVVLNFSQSWALYCLVQFYTAIKDELAHIKPLYKFLTFKSIVFLTWWQGVA 253

Query: 1090 IALFCDLDLLKSPIAQGLQFKSSIQDFIICIEMAVACIVHLYVFPAKPYELLGDRFTGNF 911
            IAL   L L KSPIAQGLQFKSSIQDFIICIEM +A IVHLYVFPAKPYEL+GDRF G+ 
Sbjct: 254  IALLYSLGLFKSPIAQGLQFKSSIQDFIICIEMGIASIVHLYVFPAKPYELMGDRFPGSV 313

Query: 910  SVLGDY-SADCPLDPDEIRDSERPTKIRLPQPDVDVKSGMKIRESVKDVVFGSGGYIVKD 734
            +VLGDY S DCP+DPDE+RDSERPTK+RLPQPD+DV+SGM I+ESV+DVV G GG+IV D
Sbjct: 314  AVLGDYVSVDCPVDPDEVRDSERPTKLRLPQPDIDVRSGMTIKESVRDVVVGGGGFIVND 373

Query: 733  VKFTVNQAVDPVEKGFTRFNEKLHKISENIKRHDKEKRKTKDDSCIG--SPTRKVIRGID 560
            VKFTVNQAV+PVEKG  +FNEKLH+IS+N+K+H+K+KR+TKDDSCI   SPTR+VIRGID
Sbjct: 374  VKFTVNQAVEPVEKGIIKFNEKLHRISQNMKQHNKDKRRTKDDSCIATPSPTRRVIRGID 433

Query: 559  DPLLNGSISDSGVSRSKKH-RRKXXXXXXXXXXXXXXXXXXXXXQVRGRRWVTKE 398
            DPLL GS SD+GV+R KKH RRK                     QVRGRRWVTK+
Sbjct: 434  DPLLIGSFSDTGVARGKKHNRRKSGYISGESGGESSSDQSYGAYQVRGRRWVTKD 488


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