BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001301
         (1492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vit...   270   6e-70
ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|2...   257   6e-66
ref|XP_002513900.1| conserved hypothetical protein [Ricinus comm...   232   2e-58
ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata sub...   228   3e-57
ref|NP_565169.1| F-box protein [Arabidopsis thaliana] gi|7526224...   226   9e-57

>ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vitis vinifera]
          Length = 320

 Score =  270 bits (691), Expect = 6e-70
 Identities = 159/334 (47%), Positives = 213/334 (63%), Gaps = 8/334 (2%)
 Frame = +1

Query: 133  HHLS-DGFDQIPDDIILLIFNKLSDIKSLTRCRSVTKRFNLLVLQAENILVKVDCVVSSE 309
            H +S D FD++PD +IL+IFN ++DIK+L RCR+V+KRFN LV QAE +++KVD V+S++
Sbjct: 2    HQMSEDSFDRLPDPLILVIFNSVADIKTLIRCRAVSKRFNSLVPQAETLVLKVDRVISTD 61

Query: 310  TGDXXXXXXXXXXXXXXHDLISPKQRYNSSFPPRNQSSPSEILRDFEKIKRLEIELPSGD 489
            +                H +ISPK   +    PR  +SP++ILR F++I+ LEIELP GD
Sbjct: 62   SDGSFFLSFLKSIFRSLHHIISPK---SLPIQPRPHNSPTQILRGFDRIRNLEIELPGGD 118

Query: 490  LRLEKGIVLRWKAEFGKSLETCVILAIRSIDEVKGEDCVQSNGDDMEGNSGLKLRVVWTI 669
            L LEKG VL+WKAEFGK L++CVI+  R + E  GE+     G DM+G  GLK+RVVWTI
Sbjct: 119  LCLEKGAVLKWKAEFGKRLKSCVIMGYRGLGE--GEEL--DFGGDMDG--GLKVRVVWTI 172

Query: 670  SALIAASTRHYLLREVIREHKQIEDLVLRDREGEGTVVMNKQGLGEFRESEGEGNVRTVG 849
            SALIAAS RHYLLRE+IREH+++E LVLRDR+GEGTVVM+++ L E R+ EGE       
Sbjct: 173  SALIAASARHYLLRELIREHRELERLVLRDRDGEGTVVMDREALRECRDGEGEEEQEEEA 232

Query: 850  W------RNRTTVPXXXXXXXXXXXIDLP-CGVRVTGATLVVIKPTNGNEVMKNDNEEQV 1008
                   ++RT VP           ++L  CGVR+ GATLVV+ P      +K+  +   
Sbjct: 233  VEPGERDKSRTKVPAVQMRMRHEPLLELEGCGVRMGGATLVVVTP------IKDGRKTGT 286

Query: 1009 EDNGMALXXXXXXXXXXXXALLKKPSYLLEMNSF 1110
            E+ G+               LLK  +YLLEMNSF
Sbjct: 287  EEAGLVCDAFEGMFGEAARTLLKTRTYLLEMNSF 320


>ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|222856836|gb|EEE94383.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  257 bits (656), Expect = 6e-66
 Identities = 149/323 (46%), Positives = 196/323 (60%), Gaps = 1/323 (0%)
 Frame = +1

Query: 145  DGFDQIPDDIILLIFNKLSDIKSLTRCRSVTKRFNLLVLQAENILVKVDCVVSSETGDXX 324
            DGFD++PD +ILLIFN +SDIK+L RCRSV+KRFN LV Q E++ +KVDCV+S E+    
Sbjct: 6    DGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPESDSDS 65

Query: 325  XXXXXXXXXXXXHDLISPKQRYNSSFPPRNQSSPSEILRDFEKIKRLEIELPSGDLRLEK 504
                        HDL  P  +  +    + Q+SP+ IL  F++I+ L+IELP+GDL+LEK
Sbjct: 66   LFTLFKSLLKSIHDLFKPDPKPTAR--NQTQNSPARILSQFDRIRDLQIELPAGDLKLEK 123

Query: 505  GIVLRWKAEFGKSLETCVILAIRSIDEVKGEDCVQSNGDDMEGNSGLKLRVVWTISALIA 684
            G V++W+AEFGKSL++CVIL  R +   +G     S  ++++   GLK RVVW ISALIA
Sbjct: 124  GAVIKWRAEFGKSLKSCVILGFRRVANPEGN----SADEEIDFTGGLKTRVVWAISALIA 179

Query: 685  ASTRHYLLREVIREHKQIEDLVLRDREGEGTVVMNKQGLGEFRESEGEGNVRTVGWRNRT 864
            AS RHYLL +V++ H+++E LVL DREGEGTV M K+GL E RE+   G     G   RT
Sbjct: 180  ASARHYLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECREAARGGEWEEDG--GRT 237

Query: 865  TVPXXXXXXXXXXXIDLPCGVRVTGATLVVIKPTNGNEVMKNDNEEQVEDNGMAL-XXXX 1041
             VP           + L  GV + G TLVV++P +G            ED  +AL     
Sbjct: 238  VVPSVRMRMRHEQRVQLKDGVWMEGVTLVVVRPCSGG--------GDGEDAELALGAFGG 289

Query: 1042 XXXXXXXXALLKKPSYLLEMNSF 1110
                     LLK  SYLLEMNSF
Sbjct: 290  GIYGEAVQVLLKNKSYLLEMNSF 312


>ref|XP_002513900.1| conserved hypothetical protein [Ricinus communis]
            gi|223546986|gb|EEF48483.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 303

 Score =  232 bits (591), Expect = 2e-58
 Identities = 140/325 (43%), Positives = 192/325 (59%), Gaps = 3/325 (0%)
 Frame = +1

Query: 145  DGFDQIPDDIILLIFNKLSDIKSLTRCRSVTKRFNLLVLQAENILVKVDCVVSSETG-DX 321
            DGFD++PD +I+LIFN +S IK+L RCRSV+KRFN LV Q E++L+ VD V+S+E+  + 
Sbjct: 2    DGFDRLPDSLIVLIFNSVSHIKTLIRCRSVSKRFNSLVPQTESLLLTVDRVISTESDTEI 61

Query: 322  XXXXXXXXXXXXXHDLISPKQRYNSSFPPRNQSSPSEILRDFEKIKRLEIELPSGDLRLE 501
                         HDL  P +          Q++P++IL  FE+I+ LEIELP+GDL+LE
Sbjct: 62   LLLAFLKSLLKSIHDLFKPDEEKPIQNVNLTQNTPAQILSRFERIRDLEIELPAGDLKLE 121

Query: 502  KGIVLRWKAEFGKSLETCVILAIRSIDEVKGEDCVQSNGDDMEGNSGLKLRVVWTISALI 681
            KG+V++W+AE+GK+L++CVI+  R+            N DD +    LK RVVWTISALI
Sbjct: 122  KGVVIKWRAEYGKTLKSCVIMGFRT-----------RNSDDFD----LKARVVWTISALI 166

Query: 682  AASTRHYLLREVIREHKQIEDLVLRDREGEGTVVMNKQGLGEFR-ESEGEGNVRTVGWRN 858
            AAS RHYLL++V+REH+++E LVL+D++ EGTVVM K  L E R +    G         
Sbjct: 167  AASARHYLLKDVVREHEEMERLVLKDKDEEGTVVMEKDDLRECRIDMAARGKDEWEWQAR 226

Query: 859  RTTVPXXXXXXXXXXXIDLPCGVRVTGATLVVIKPTNGNEVMKNDNEEQVEDNGMAL-XX 1035
            RT VP           + L  G  + GATLVV++P           +  VED  +A+   
Sbjct: 227  RTVVPSVRMRVRHETRVRLSDGTWLEGATLVVVRPCVA--------DADVEDAELAMDAF 278

Query: 1036 XXXXXXXXXXALLKKPSYLLEMNSF 1110
                       LLK  SY+LEMNSF
Sbjct: 279  GGEVYGEAVKLLLKTKSYVLEMNSF 303


>ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333562|gb|EFH63980.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score =  228 bits (581), Expect = 3e-57
 Identities = 135/338 (39%), Positives = 195/338 (57%), Gaps = 16/338 (4%)
 Frame = +1

Query: 145  DGFDQIPDDIILLIFNKLSDIKSLTRCRSVTKRFNLLVLQAENILVKVDCVVSSETGDXX 324
            D FD IPD +++ I NK+ D+K+L RCRSV+KRFN L  Q++++L+++D ++ +   D  
Sbjct: 2    DAFDAIPDPVVIDILNKVGDVKTLIRCRSVSKRFNSLATQSDSLLLQLDQILGATESDSE 61

Query: 325  XXXXXXXXXXXXHDLIS------PKQRYNSSFPPRNQSSPSEILRDFEKIKRLEIELPSG 486
                           I        K         R+  +P++IL  FE+I+ LE+EL  G
Sbjct: 62   IDSPIASFFRSLFKSIYGLLPSFSKPAKTDEILTRSPKTPAQILAGFERIRNLEVELYGG 121

Query: 487  DLRLEKGIVLRWKAEFGKSLETCVILAIRSIDEVKGEDCVQSNG-------DDMEGNSGL 645
            D++LEKG  ++WKAEFGK+L++CVI+A RS   V      +S          D E   GL
Sbjct: 122  DVKLEKGAAVKWKAEFGKTLKSCVIVAFRSAT-VNTSAATESTAVVDGGVESDSEFVCGL 180

Query: 646  KLRVVWTISALIAASTRHYLLREVIREHKQIEDLVLRDREGEGTVVMNKQGLGEFRESEG 825
            K RVVWTISAL+AASTRHYL+R+++++HK +E L++RDREGEGTVVM+  G+ E+RE+E 
Sbjct: 181  KTRVVWTISALMAASTRHYLMRDLVKDHKDMEKLIVRDREGEGTVVMDAAGMKEYRETEA 240

Query: 826  EGNVRT---VGWRNRTTVPXXXXXXXXXXXIDLPCGVRVTGATLVVIKPTNGNEVMKNDN 996
             G+ +T   VG   RT VP           + L  G+ +  ATLVV++PT    V  +DN
Sbjct: 241  RGDDKTLERVG--ERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTG---VASDDN 295

Query: 997  EEQVEDNGMALXXXXXXXXXXXXALLKKPSYLLEMNSF 1110
            + ++     A             ALLK+   +LEMNSF
Sbjct: 296  DVELVTEAFAGDGGDCMYGEAVTALLKRRRNVLEMNSF 333


>ref|NP_565169.1| F-box protein [Arabidopsis thaliana]
            gi|75262248|sp|Q9C9S2.1|FB91_ARATH RecName: Full=F-box
            protein At1g78100 gi|12324249|gb|AAG52096.1|AC012680_7
            unknown protein; 22671-23675 [Arabidopsis thaliana]
            gi|15450976|gb|AAK96759.1| Unknown protein [Arabidopsis
            thaliana] gi|20148731|gb|AAM10256.1| unknown protein
            [Arabidopsis thaliana] gi|332197946|gb|AEE36067.1| F-box
            protein [Arabidopsis thaliana]
          Length = 334

 Score =  226 bits (577), Expect = 9e-57
 Identities = 133/336 (39%), Positives = 196/336 (58%), Gaps = 14/336 (4%)
 Frame = +1

Query: 145  DGFDQIPDDIILLIFNKLSDIKSLTRCRSVTKRFNLLVLQAENILVKVDCVVSSETGDXX 324
            D FD IPD +++ I N++ D+K+L RCRSV+KRFN L  Q+E++L+++D ++ +   D  
Sbjct: 2    DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 325  XXXXXXXXXXXX----HDLISP---KQRYNSSFPPRNQSSPSEILRDFEKIKRLEIELPS 483
                            H L+ P   K   +     R+  +P++IL  FE+I+ LE+EL  
Sbjct: 62   IDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVELYG 121

Query: 484  GDLRLEKGIVLRWKAEFGKSLETCVILAIRSID---EVKGEDCVQSNG---DDMEGNSGL 645
            GD++LEKG  ++WKAEFGK+L++CVI+A RS         E     +G    D E   GL
Sbjct: 122  GDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFVCGL 181

Query: 646  KLRVVWTISALIAASTRHYLLREVIREHKQIEDLVLRDREGEGTVVMNKQGLGEFRESEG 825
            K RVVWTISAL+AASTRHYL+R+++++HK++E L++RD +GEGTVVM+  G+ E+RE+E 
Sbjct: 182  KTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEV 241

Query: 826  EG-NVRTVGWRNRTTVPXXXXXXXXXXXIDLPCGVRVTGATLVVIKPTNGNEVMKNDNEE 1002
             G N  +     RT VP           + L  G+ +  ATLVV++PT    V  +DN+ 
Sbjct: 242  RGDNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTG---VASDDNDV 298

Query: 1003 QVEDNGMALXXXXXXXXXXXXALLKKPSYLLEMNSF 1110
            ++     A             ALLK+   +LEMNSF
Sbjct: 299  ELVTEAFAGDGDDCMYGEAVTALLKRRRNVLEMNSF 334