BLASTX nr result
ID: Coptis24_contig00001282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001282
(3320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi... 1452 0.0
ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloropla... 1433 0.0
ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloropla... 1430 0.0
ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloropla... 1427 0.0
sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease... 1427 0.0
>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic-like [Vitis vinifera]
Length = 923
Score = 1452 bits (3758), Expect = 0.0
Identities = 764/910 (83%), Positives = 796/910 (87%), Gaps = 1/910 (0%)
Frame = +2
Query: 347 KSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSKVE 526
+ S+ K++ +M CNV P L RGF+GLRG NALD LV SG DFHS+V
Sbjct: 24 QGSERTKKSVKMMCNVQAPGLRI----------RGFSGLRGANALDNLVRSGHDFHSRVA 73
Query: 527 ISMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXX 706
++ + G+ SRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFV
Sbjct: 74 AAISVRGGKASRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG 133
Query: 707 XAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYI 886
AAKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYI
Sbjct: 134 IAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYI 193
Query: 887 GSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNKMP 1066
GS VAAR LENLGADP+NIRTQVIRMV NKMP
Sbjct: 194 GSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGTTGNKMP 253
Query: 1067 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL 1246
TLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL
Sbjct: 254 TLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL 313
Query: 1247 AQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 1426
AQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV
Sbjct: 314 AQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 373
Query: 1427 HTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 1606
HTL LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE
Sbjct: 374 HTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 433
Query: 1607 PTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAGSR 1786
P+VDET+QILKGLRERYEIHHKLRYTDEAL +AA LSYQYISDRFLPDKAIDLIDEAGSR
Sbjct: 434 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAARLSYQYISDRFLPDKAIDLIDEAGSR 493
Query: 1787 VRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDKGK 1966
VRLR AQLPEEARELEKELRQITKEKNEA R QDFEKAGELRD+E+DLK QI +LIDKGK
Sbjct: 494 VRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMDLKAQISTLIDKGK 553
Query: 1967 EKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQDE 2146
E TKAE EAGD GP+VTEVDIQHIVS+WTGIPV+KVSTDES RLLKMEE LH RVIGQDE
Sbjct: 554 EMTKAETEAGDIGPMVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDE 613
Query: 2147 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMS 2326
AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMS
Sbjct: 614 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 673
Query: 2327 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 2506
EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE
Sbjct: 674 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 733
Query: 2507 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 2686
DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE
Sbjct: 734 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 793
Query: 2687 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEISEIMLKEVFERLRVKEIELQVTERFKDRVV 2866
LKQYFRPEFLNRLDEMIVFRQLTKLEVK+I++IMLKEVFERL+ K+IELQVTERF+DRVV
Sbjct: 794 LKQYFRPEFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVV 853
Query: 2867 DEGYNPSYGARPLRRAIMRLLEDSMAEKMLGGEIKEGDSVIVDVDADGNVTVLNGSSGA- 3043
DEGYNPSYGARPLRRAIMRLLEDSMAEKML EIKEGDSVIVDVD+DGNVTVLNGSSGA
Sbjct: 854 DEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP 913
Query: 3044 TEPLSPALPL 3073
E L A+P+
Sbjct: 914 PESLPEAMPV 923
>ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
[Glycine max] gi|356508863|ref|XP_003523173.1| PREDICTED:
chaperone protein ClpC, chloroplastic-like isoform 2
[Glycine max]
Length = 922
Score = 1433 bits (3709), Expect = 0.0
Identities = 753/911 (82%), Positives = 787/911 (86%)
Frame = +2
Query: 341 SGKSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSK 520
SGK ++ K +R N + GF+GLR N LDT++ GIDFHSK
Sbjct: 26 SGKLKRSTKMMSALRTN--------------GLRMSGFSGLRTFNPLDTMLRPGIDFHSK 71
Query: 521 VEISMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 700
V I+ R R +RCV +AMFERFTEKAIKVIMLAQEEARRLGHNFV
Sbjct: 72 VSIATSSRRARATRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 131
Query: 701 XXXAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 880
AAKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN
Sbjct: 132 TGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 191
Query: 881 YIGSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNK 1060
YIGS VAAR LENLGADP NIRTQVIRMV NK
Sbjct: 192 YIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVTATVGSGSSGNK 251
Query: 1061 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 1240
MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE
Sbjct: 252 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 311
Query: 1241 GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 1420
GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID
Sbjct: 312 GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 371
Query: 1421 EVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 1600
EVHTL LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV
Sbjct: 372 EVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 431
Query: 1601 PEPTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAG 1780
PEPTVDET+QILKGLRERYEIHHKLRYTDEAL AAA LSYQYISDRFLPDKAIDLIDEAG
Sbjct: 432 PEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAG 491
Query: 1781 SRVRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDK 1960
SRVRL+ AQLPEEAREL+KE+RQI KEK EA R QDFEKAGELRD+E+DLK QI +L++K
Sbjct: 492 SRVRLQHAQLPEEARELDKEVRQIIKEKEEAVRNQDFEKAGELRDREMDLKAQISTLVEK 551
Query: 1961 GKEKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQ 2140
GKE +KAE+EAGD+ PVVTE DIQHIVSSWTGIPV+KVSTDES RLLKMEE LH RVIGQ
Sbjct: 552 GKEMSKAESEAGDASPVVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 611
Query: 2141 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLD 2320
DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLD
Sbjct: 612 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 671
Query: 2321 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 2500
MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI
Sbjct: 672 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 731
Query: 2501 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 2680
LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVT
Sbjct: 732 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVT 791
Query: 2681 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEISEIMLKEVFERLRVKEIELQVTERFKDR 2860
EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI++IMLKEVFERL+VK+IELQVTERF+DR
Sbjct: 792 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKDIELQVTERFRDR 851
Query: 2861 VVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLGGEIKEGDSVIVDVDADGNVTVLNGSSG 3040
VV+EGYNPSYGARPLRRAIMRLLEDSMAEKML EIKEGDSVIVDVD+DGNV VLNGSSG
Sbjct: 852 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGSSG 911
Query: 3041 ATEPLSPALPL 3073
A E L ALP+
Sbjct: 912 APESLPEALPV 922
>ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 922
Score = 1430 bits (3701), Expect = 0.0
Identities = 750/911 (82%), Positives = 785/911 (86%)
Frame = +2
Query: 341 SGKSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSK 520
SGK ++ K +R N + GF+GLR N LDT++ GIDFHSK
Sbjct: 26 SGKLKRSTKMMSALRTN--------------GLRMSGFSGLRTFNPLDTMLRPGIDFHSK 71
Query: 521 VEISMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 700
V I+ + R +RCV +AMFERFTEKAIKVIMLAQEEARRLGHNFV
Sbjct: 72 VSIATSSRQARATRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 131
Query: 701 XXXAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 880
AAKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN
Sbjct: 132 TGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 191
Query: 881 YIGSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNK 1060
YIGS VAAR LENLGADP NIRTQVIRMV NK
Sbjct: 192 YIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVTATVGSGSSGNK 251
Query: 1061 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 1240
MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE
Sbjct: 252 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 311
Query: 1241 GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 1420
GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID
Sbjct: 312 GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 371
Query: 1421 EVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 1600
EVHTL LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV
Sbjct: 372 EVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 431
Query: 1601 PEPTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAG 1780
PEPTVDET+QILKGLRERYEIHHKLRYTDEAL AAA LSYQYISDRFLPDKAIDLIDEAG
Sbjct: 432 PEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAG 491
Query: 1781 SRVRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDK 1960
SRVRL+ AQLPEEAREL+KE+RQI KEK EA R QDFEKAGELRD+E+DLK QI +L++K
Sbjct: 492 SRVRLQHAQLPEEARELDKEVRQIIKEKEEAVRNQDFEKAGELRDREMDLKAQISTLVEK 551
Query: 1961 GKEKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQ 2140
GKE +KAE EAGD GP+VTE DIQHIVSSWTGIPV+KVSTDES RLLKMEE LH RVIGQ
Sbjct: 552 GKEMSKAETEAGDEGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 611
Query: 2141 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLD 2320
DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLD
Sbjct: 612 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 671
Query: 2321 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 2500
MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI
Sbjct: 672 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 731
Query: 2501 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 2680
LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVT
Sbjct: 732 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVT 791
Query: 2681 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEISEIMLKEVFERLRVKEIELQVTERFKDR 2860
EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI++IMLKEVF+RL+VK+IELQVTERF+DR
Sbjct: 792 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKVKDIELQVTERFRDR 851
Query: 2861 VVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLGGEIKEGDSVIVDVDADGNVTVLNGSSG 3040
VV+EGYNPSYGARPLRRAIMRLLEDSMAEKML EIKEGDSVIVDVD+DGNV VLNGSSG
Sbjct: 852 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGSSG 911
Query: 3041 ATEPLSPALPL 3073
A E L LP+
Sbjct: 912 APESLPETLPV 922
>ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus] gi|449505877|ref|XP_004162592.1| PREDICTED:
chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 924
Score = 1427 bits (3694), Expect = 0.0
Identities = 755/913 (82%), Positives = 793/913 (86%), Gaps = 2/913 (0%)
Frame = +2
Query: 341 SGKSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSK 520
S + S N K+ +M +V +P + +S F+GLRG N+LD + G DFHSK
Sbjct: 22 SSRGSGNAKRVVKMMSSVHSPGMRMRS----------FSGLRGLNSLDNMFRPGQDFHSK 71
Query: 521 VEISMRLPRG-RGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXX 697
V I++ RG R SR V RAMFERFTEKAIKVIMLAQEEARRLGHNFV
Sbjct: 72 VAIAISSRRGGRPSRGVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGE 131
Query: 698 XXXXAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGH 877
AAKVLK+MGINLKDARVEVEKIIGRG GFVAVEIPFTPRAKRVLELSLEEARQLGH
Sbjct: 132 GTGIAAKVLKSMGINLKDARVEVEKIIGRGGGFVAVEIPFTPRAKRVLELSLEEARQLGH 191
Query: 878 NYIGSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXN 1057
NYIGS VAAR LENLGADP NIRTQVIRMV N
Sbjct: 192 NYIGSEHLLLGLLREGEGVAARVLENLGADPANIRTQVIRMVGESTEAVGAGVGGGSSGN 251
Query: 1058 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIA 1237
KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIA
Sbjct: 252 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIA 311
Query: 1238 EGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 1417
EGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI
Sbjct: 312 EGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 371
Query: 1418 DEVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 1597
DEVHTL LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVK
Sbjct: 372 DEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 431
Query: 1598 VPEPTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEA 1777
VPEP+VDET+QILKGLRERYEIHHKLRYTDEALEAAA LSYQYISDRFLPDKAIDLIDEA
Sbjct: 432 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALEAAAQLSYQYISDRFLPDKAIDLIDEA 491
Query: 1778 GSRVRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLID 1957
GSRVRLR AQLPEEA+E+EKELRQITKEKN+A R QDFEKAGELRD+E++LK +I +LID
Sbjct: 492 GSRVRLRHAQLPEEAKEVEKELRQITKEKNDAVRSQDFEKAGELRDREMELKAKISALID 551
Query: 1958 KGKEKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIG 2137
KGKE +KAE+EAGD GPVVTEVDIQHIVSSWTGIPV+KVSTDES RLLKMEE LH RVIG
Sbjct: 552 KGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHRRVIG 611
Query: 2138 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRL 2317
QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRL
Sbjct: 612 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 671
Query: 2318 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 2497
DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ
Sbjct: 672 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 731
Query: 2498 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 2677
ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR+GFDLDYDEKDSSY RIKSLV
Sbjct: 732 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFDLDYDEKDSSYTRIKSLV 791
Query: 2678 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEISEIMLKEVFERLRVKEIELQVTERFKD 2857
TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI++IMLKEVF+RL+ KEI+LQVTERF+D
Sbjct: 792 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKGKEIDLQVTERFRD 851
Query: 2858 RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLGGEIKEGDSVIVDVDADGNVTVLNGSS 3037
RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKML EIKEGDSVIVDVD+DGNVTVLNGSS
Sbjct: 852 RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 911
Query: 3038 GAT-EPLSPALPL 3073
GA E L+ +P+
Sbjct: 912 GAAPESLADPIPV 924
>sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic; Flags: Precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
[Solanum lycopersicum]
Length = 923
Score = 1427 bits (3694), Expect = 0.0
Identities = 754/908 (83%), Positives = 784/908 (86%), Gaps = 1/908 (0%)
Frame = +2
Query: 353 SKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSKVEIS 532
S K+ M CN + S+ R FTGLRG NA+DTLV SG SKV +
Sbjct: 26 SGKTKRAVTMLCNAQSS----------SLTLRDFTGLRGCNAIDTLVRSGETLQSKVAAA 75
Query: 533 MRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXA 712
+ R RG R V +AMFERFTEKAIKVIMLAQEEARRLGHNFV A
Sbjct: 76 TYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIA 135
Query: 713 AKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS 892
AKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS
Sbjct: 136 AKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS 195
Query: 893 XXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNKMPTL 1072
VAAR LENLGADP+NIRTQVIRMV KMPTL
Sbjct: 196 EHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAVGASVGGGTSGQKMPTL 255
Query: 1073 EEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 1252
EEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ
Sbjct: 256 EEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 315
Query: 1253 RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 1432
RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT
Sbjct: 316 RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 375
Query: 1433 LXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPT 1612
L LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPT
Sbjct: 376 LIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPT 435
Query: 1613 VDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAGSRVR 1792
VDET+QILKGLRERYEIHHKLRYTDE L AAA LSYQYISDRFLPDKAIDLIDEAGSRVR
Sbjct: 436 VDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVR 495
Query: 1793 LRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDKGKEK 1972
LR AQLPEEA+ELEKELRQITKEKNEA RGQDFEKAGELRD+E+DLK QI +LIDK KE
Sbjct: 496 LRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEV 555
Query: 1973 TKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQDEAV 2152
+KAE+EA D+GP+VTE DIQHIVSSWTGIPV+KVSTDES RLLKMEE LH R+IGQDEAV
Sbjct: 556 SKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAV 615
Query: 2153 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEF 2332
KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEF
Sbjct: 616 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 675
Query: 2333 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 2512
MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG
Sbjct: 676 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 735
Query: 2513 RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELK 2692
RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD DEKDSSYNRIKSLVTEELK
Sbjct: 736 RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELK 795
Query: 2693 QYFRPEFLNRLDEMIVFRQLTKLEVKEISEIMLKEVFERLRVKEIELQVTERFKDRVVDE 2872
QYFRPEFLNRLDEMIVFRQLTKLEVKEI++IMLKEVFERL+VKEIELQVTERF+DRVVDE
Sbjct: 796 QYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDE 855
Query: 2873 GYNPSYGARPLRRAIMRLLEDSMAEKMLGGEIKEGDSVIVDVDADGNVTVLNGSSGA-TE 3049
GYNPSYGARPLRRAIMRLLEDSMAEKML EIKEGDSVIVDVD+DGNVTVLNGSSG ++
Sbjct: 856 GYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGTPSD 915
Query: 3050 PLSPALPL 3073
P +P+
Sbjct: 916 PAPEPIPV 923