BLASTX nr result

ID: Coptis24_contig00001280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001280
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531873.1| methylenetetrahydrofolate dehydrogenase, put...   421   e-115
ref|XP_002263128.2| PREDICTED: c-1-tetrahydrofolate synthase, cy...   419   e-115
ref|XP_004152261.1| PREDICTED: c-1-tetrahydrofolate synthase, cy...   416   e-114
gb|ABK96126.1| unknown [Populus trichocarpa]                          416   e-114
gb|AAD01907.1| 5,10-methylenetetrahydrofolate dehydrogenase-5,10...   409   e-112

>ref|XP_002531873.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
            gi|223528481|gb|EEF30510.1| methylenetetrahydrofolate
            dehydrogenase, putative [Ricinus communis]
          Length = 299

 Score =  421 bits (1081), Expect = e-115
 Identities = 218/292 (74%), Positives = 240/292 (82%)
 Frame = -3

Query: 1148 KATIIDGKAIAHTIRSEIASEVQQLSTKHGKVPGLAVIIVGSRKDSQSYVNMKRKACAEV 969
            KATIIDGKAIA TIRSEIA EV+QLS K+GKVPGLAV+IVG+RKDSQSYV+MKRKACAEV
Sbjct: 8    KATIIDGKAIAQTIRSEIADEVRQLSEKYGKVPGLAVVIVGNRKDSQSYVSMKRKACAEV 67

Query: 968  GIKSYDINLPEKVPEAELIQKVQELNAHPDIHGILVQLPLPAHINEENVLNEISIEKDVD 789
            GIKS+DINLPE+V EAELI KV ELNA+ D+HGILVQLPLP HINEE VL+EISIEKDVD
Sbjct: 68   GIKSFDINLPEQVSEAELISKVHELNANTDVHGILVQLPLPKHINEEKVLSEISIEKDVD 127

Query: 788  GFHPLNIGKLGMKGRDPLFQPCTPKGCLELLSRSGISVKSKRAVIVGRSNIVGLPVALLL 609
            GFHPLNIGKL MKGR+PLF PCTPKGCLELLSRSGIS+K K+AV+VGRSNIVGLPV+LLL
Sbjct: 128  GFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGISIKGKKAVVVGRSNIVGLPVSLLL 187

Query: 608  LKADATVTVVHSRTTXXXXXXXXXXXXXXXAGQANMIKGDWIKPGAAVIDVGTNAVDDPS 429
            LKADATV++VHSRT                AGQ  MIKG WIKPGAAVIDVGTNAVDDPS
Sbjct: 188  LKADATVSIVHSRTEDPERIICEADIIIAAAGQPMMIKGSWIKPGAAVIDVGTNAVDDPS 247

Query: 428  RKSGYRLVGDVDFEQACKXXXXXXXXXXXXXXXXXXMLLKNTLDGAKRKIEQ 273
            +KSGYRLVGDVD+++AC                   MLLKNTLDGAKR+  Q
Sbjct: 248  KKSGYRLVGDVDYKEACNVAGWITPVPGGVGPMTVAMLLKNTLDGAKREFMQ 299


>ref|XP_002263128.2| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic [Vitis
            vinifera]
          Length = 307

 Score =  419 bits (1077), Expect = e-115
 Identities = 219/292 (75%), Positives = 240/292 (82%)
 Frame = -3

Query: 1148 KATIIDGKAIAHTIRSEIASEVQQLSTKHGKVPGLAVIIVGSRKDSQSYVNMKRKACAEV 969
            KA+IIDGKAIA  IRSEIA EV+ LS K+GKVPGLAV+IVG+RKDSQSYV+MKRKACAEV
Sbjct: 8    KASIIDGKAIAQAIRSEIAEEVRHLSEKYGKVPGLAVVIVGNRKDSQSYVSMKRKACAEV 67

Query: 968  GIKSYDINLPEKVPEAELIQKVQELNAHPDIHGILVQLPLPAHINEENVLNEISIEKDVD 789
            GIKS+D++LPE+V E+ELI KV ELNA PD+HGILVQLPLP HINEE VL+EIS+EKDVD
Sbjct: 68   GIKSFDVDLPEQVLESELIGKVHELNALPDVHGILVQLPLPKHINEEKVLSEISLEKDVD 127

Query: 788  GFHPLNIGKLGMKGRDPLFQPCTPKGCLELLSRSGISVKSKRAVIVGRSNIVGLPVALLL 609
            GFHPLNIGKL MKGR+PLF PCTPKGCLELLSRSGISVK K+AV+VGRSNIVGLPVALLL
Sbjct: 128  GFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGISVKGKKAVVVGRSNIVGLPVALLL 187

Query: 608  LKADATVTVVHSRTTXXXXXXXXXXXXXXXAGQANMIKGDWIKPGAAVIDVGTNAVDDPS 429
            LKADATVTVVHS T                AGQA MIKG WIKPGAAVIDVGTNAV+DPS
Sbjct: 188  LKADATVTVVHSHTQDPESIIRDADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVNDPS 247

Query: 428  RKSGYRLVGDVDFEQACKXXXXXXXXXXXXXXXXXXMLLKNTLDGAKRKIEQ 273
            +KSGYRLVGDVDF++ACK                  MLLKNTLDGAKR IEQ
Sbjct: 248  KKSGYRLVGDVDFQEACKVAGWVTPVPGGVGPMTVAMLLKNTLDGAKRVIEQ 299


>ref|XP_004152261.1| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Cucumis
            sativus] gi|449484305|ref|XP_004156845.1| PREDICTED:
            c-1-tetrahydrofolate synthase, cytoplasmic-like [Cucumis
            sativus]
          Length = 299

 Score =  416 bits (1069), Expect = e-114
 Identities = 211/298 (70%), Positives = 241/298 (80%)
 Frame = -3

Query: 1166 SEEEQKKATIIDGKAIAHTIRSEIASEVQQLSTKHGKVPGLAVIIVGSRKDSQSYVNMKR 987
            + E   KATIIDGK IA T+RSEI  EV +LS K+GK+PGLAV+IVG+RKDS +YVNMKR
Sbjct: 2    ASESDHKATIIDGKKIAQTVRSEITEEVNKLSQKYGKIPGLAVVIVGNRKDSLTYVNMKR 61

Query: 986  KACAEVGIKSYDINLPEKVPEAELIQKVQELNAHPDIHGILVQLPLPAHINEENVLNEIS 807
            KAC EVGIKS++I+LPE+V EAELI KV ELNA+P++HGILVQLPLP HINEE VL+EIS
Sbjct: 62   KACLEVGIKSFEIDLPEQVSEAELISKVHELNANPEVHGILVQLPLPNHINEEKVLSEIS 121

Query: 806  IEKDVDGFHPLNIGKLGMKGRDPLFQPCTPKGCLELLSRSGISVKSKRAVIVGRSNIVGL 627
            IEKDVDGFHPLNIGKL MKGRDPLF PCTPKGC+ELLSRSGIS++ K+AV++GRSNIVGL
Sbjct: 122  IEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCIELLSRSGISIRGKKAVVMGRSNIVGL 181

Query: 626  PVALLLLKADATVTVVHSRTTXXXXXXXXXXXXXXXAGQANMIKGDWIKPGAAVIDVGTN 447
            PV+LLLLKADATVT+VHSR+                AGQA MIKG WIKPGAAVIDVGTN
Sbjct: 182  PVSLLLLKADATVTIVHSRSVDPESVIREADIIIAAAGQAQMIKGSWIKPGAAVIDVGTN 241

Query: 446  AVDDPSRKSGYRLVGDVDFEQACKXXXXXXXXXXXXXXXXXXMLLKNTLDGAKRKIEQ 273
            AVDDP++KSGYRLVGDVDF++ACK                  MLL+NTLDGAKR IEQ
Sbjct: 242  AVDDPTKKSGYRLVGDVDFQEACKVAGWITPVPGGVGPMTVAMLLRNTLDGAKRVIEQ 299


>gb|ABK96126.1| unknown [Populus trichocarpa]
          Length = 299

 Score =  416 bits (1069), Expect = e-114
 Identities = 216/301 (71%), Positives = 242/301 (80%)
 Frame = -3

Query: 1175 MASSEEEQKKATIIDGKAIAHTIRSEIASEVQQLSTKHGKVPGLAVIIVGSRKDSQSYVN 996
            MAS  E   KAT+IDGK IA TIRSEIA EV+QLS K+GKVPGLAV+IVG+RKDSQSYV 
Sbjct: 1    MASQSEH--KATVIDGKLIAQTIRSEIAEEVRQLSEKYGKVPGLAVVIVGNRKDSQSYVG 58

Query: 995  MKRKACAEVGIKSYDINLPEKVPEAELIQKVQELNAHPDIHGILVQLPLPAHINEENVLN 816
            MKRKACAEVGI+S+D++LPE++ EAEL+ KV ELNA+PD+HGILVQLPLP HINEE VL+
Sbjct: 59   MKRKACAEVGIQSFDMDLPEQISEAELVSKVHELNANPDVHGILVQLPLPKHINEEKVLS 118

Query: 815  EISIEKDVDGFHPLNIGKLGMKGRDPLFQPCTPKGCLELLSRSGISVKSKRAVIVGRSNI 636
            EIS+ KDVDGFHPLNIGKL MK R+PLFQPCTPKGCLELL RSG+S+K KRAV+VGRSNI
Sbjct: 119  EISLAKDVDGFHPLNIGKLAMKDREPLFQPCTPKGCLELLHRSGVSIKGKRAVVVGRSNI 178

Query: 635  VGLPVALLLLKADATVTVVHSRTTXXXXXXXXXXXXXXXAGQANMIKGDWIKPGAAVIDV 456
            VGLPV+LLLLKADATVTVVHSR+                AGQ  MIKG WIKPGAAVIDV
Sbjct: 179  VGLPVSLLLLKADATVTVVHSRSNDQESIIREADIIIAAAGQPMMIKGSWIKPGAAVIDV 238

Query: 455  GTNAVDDPSRKSGYRLVGDVDFEQACKXXXXXXXXXXXXXXXXXXMLLKNTLDGAKRKIE 276
            GTNAVDDPSRK+GYRLVGDVDF++ACK                  MLLKNTL+GAKR I 
Sbjct: 239  GTNAVDDPSRKTGYRLVGDVDFKEACKIAGCITPVPGGVGPMTVAMLLKNTLEGAKRVIV 298

Query: 275  Q 273
            Q
Sbjct: 299  Q 299


>gb|AAD01907.1| 5,10-methylenetetrahydrofolate
            dehydrogenase-5,10-methenyltetrahydrofolate
            cyclohydrolase [Pisum sativum] gi|6002383|emb|CAB56756.1|
            5,10-methylenetetrahydrofolate dehydrogenase:
            5,10-methenyltetrahydrofolate cyclohydrolase [Pisum
            sativum]
          Length = 294

 Score =  409 bits (1052), Expect = e-112
 Identities = 209/291 (71%), Positives = 234/291 (80%)
 Frame = -3

Query: 1145 ATIIDGKAIAHTIRSEIASEVQQLSTKHGKVPGLAVIIVGSRKDSQSYVNMKRKACAEVG 966
            AT+IDGKA+A TIRSEIA EV+ LS K+GKVPGLAV+IVG+RKDSQSYV MKRKACAE+G
Sbjct: 2    ATVIDGKAVAQTIRSEIADEVRLLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELG 61

Query: 965  IKSYDINLPEKVPEAELIQKVQELNAHPDIHGILVQLPLPAHINEENVLNEISIEKDVDG 786
            IKS+DI+LPE   EAE+I+ V ELNA+PD+HGILVQLPLP H+NEE VL EISI KDVDG
Sbjct: 62   IKSFDIDLPEDASEAEIIKNVHELNANPDVHGILVQLPLPKHVNEEKVLTEISISKDVDG 121

Query: 785  FHPLNIGKLGMKGRDPLFQPCTPKGCLELLSRSGISVKSKRAVIVGRSNIVGLPVALLLL 606
            FHPLNIGKL MKGRDPLF PCTPK CLELLSRSG+S+K K+AV+VGRSNIVGLP +LLLL
Sbjct: 122  FHPLNIGKLAMKGRDPLFLPCTPKACLELLSRSGVSIKGKKAVVVGRSNIVGLPASLLLL 181

Query: 605  KADATVTVVHSRTTXXXXXXXXXXXXXXXAGQANMIKGDWIKPGAAVIDVGTNAVDDPSR 426
            KADATVT+VHS T+               AGQA MIKG WIKPGAAVIDVGTN+VDDP+R
Sbjct: 182  KADATVTIVHSHTSQPETIIREADIVIAAAGQAKMIKGSWIKPGAAVIDVGTNSVDDPTR 241

Query: 425  KSGYRLVGDVDFEQACKXXXXXXXXXXXXXXXXXXMLLKNTLDGAKRKIEQ 273
            KSGYRLVGDVDFE+A K                  MLLKNTL+GAKR IEQ
Sbjct: 242  KSGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLKNTLEGAKRTIEQ 292


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