BLASTX nr result

ID: Coptis24_contig00001274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001274
         (1605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270182.1| PREDICTED: probable xyloglucan endotransgluc...   411   e-112
ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransgluc...   408   e-111
emb|CAN80252.1| hypothetical protein VITISV_036642 [Vitis vinifera]   408   e-111
emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]   407   e-111
ref|XP_002274827.1| PREDICTED: probable xyloglucan endotransgluc...   407   e-111

>ref|XP_002270182.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein
            23-like [Vitis vinifera]
          Length = 296

 Score =  411 bits (1057), Expect = e-112
 Identities = 207/321 (64%), Positives = 229/321 (71%), Gaps = 6/321 (1%)
 Frame = +1

Query: 358  MFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXXXXXXXXXXXXXX 537
            +F++ +L  SF+ +   NL QD EITWGDGRAK+                          
Sbjct: 13   LFLVSLLLGSFVVASVGNLYQDFEITWGDGRAKILNNGELLTL----------------- 55

Query: 538  XXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLG 717
               SLDKTSGSGFQS+NEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLG
Sbjct: 56   ---SLDKTSGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLG 112

Query: 718  NLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIXXXXXXXXXXXXX 897
            NL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+L                   
Sbjct: 113  NLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSIL------------------- 153

Query: 898  XXXWNPLSIIFFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDW 1077
               WNP  IIF VDGTPIR+FKNSESIGV +PKNQPM+IYSSLWNADDWATRGGLVKTDW
Sbjct: 154  ---WNPQRIIFSVDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDW 210

Query: 1078 SKAPFTASYANFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKNY 1239
            S+APFTASY NF A ACIW             +      W +Q LDSTSQE +K VQKNY
Sbjct: 211  SQAPFTASYRNFNADACIWSSGASSCSSTTPSSTSTSGQWYSQELDSTSQERMKWVQKNY 270

Query: 1240 MIYNYCTDTKRFPQGLPRECS 1302
            MIYNYCTDTKRFPQGLP EC+
Sbjct: 271  MIYNYCTDTKRFPQGLPPECT 291


>ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein
            23 [Vitis vinifera]
          Length = 296

 Score =  408 bits (1048), Expect = e-111
 Identities = 204/333 (61%), Positives = 231/333 (69%), Gaps = 6/333 (1%)
 Frame = +1

Query: 322  MTCNTSCRAETLMFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXX 501
            M   ++      + ++ +L  SF+ +   NL QD ++TWGDGRAK+              
Sbjct: 1    MASTSTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDLTWGDGRAKILNNGQLLTL----- 55

Query: 502  XXXXXXXXXXXXXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQG 681
                           SLDK SGSGFQS+NEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQG
Sbjct: 56   ---------------SLDKASGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQG 100

Query: 682  PTHDEIDFEFLGNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIX 861
            PTHDEIDFEFLGNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+L       
Sbjct: 101  PTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSIL------- 153

Query: 862  XXXXXXXXXXXXXXXWNPLSIIFFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADD 1041
                           WNP  IIF VDGTPIR+FKNSESIGVPFPKNQPM+IYSSLWNADD
Sbjct: 154  ---------------WNPQRIIFSVDGTPIREFKNSESIGVPFPKNQPMRIYSSLWNADD 198

Query: 1042 WATRGGLVKTDWSKAPFTASYANFKAQACIWXXXXXXXXXXXXDT------WLTQGLDST 1203
            WATRGGLVKTDW++APFTASY NF A AC+W             +      W +Q LDST
Sbjct: 199  WATRGGLVKTDWTQAPFTASYRNFNANACVWSSRSSSCSSTSPSSTSTNGGWYSQELDST 258

Query: 1204 SQESIKSVQKNYMIYNYCTDTKRFPQGLPRECS 1302
            SQE +K VQKNYMIYNYCTDTKRFPQGLP EC+
Sbjct: 259  SQERMKWVQKNYMIYNYCTDTKRFPQGLPPECT 291


>emb|CAN80252.1| hypothetical protein VITISV_036642 [Vitis vinifera]
          Length = 287

 Score =  408 bits (1048), Expect = e-111
 Identities = 205/322 (63%), Positives = 229/322 (71%), Gaps = 6/322 (1%)
 Frame = +1

Query: 355  LMFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXXXXXXXXXXXXX 534
            ++F++ +L  SF+ +   NL QD  ITWGDGRAK+                         
Sbjct: 3    VLFLVSLLLGSFVVASVGNLXQDFXITWGDGRAKILNNGELLTL---------------- 46

Query: 535  XXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFL 714
                SLDKTSGSGFQS+NEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFL
Sbjct: 47   ----SLDKTSGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFL 102

Query: 715  GNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIXXXXXXXXXXXX 894
            GNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+L                  
Sbjct: 103  GNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSIL------------------ 144

Query: 895  XXXXWNPLSIIFFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTD 1074
                WNP  IIF VDGTPIR+FKNSESIGV +PKNQPM+IYSSLWNADDWATRGGLVKTD
Sbjct: 145  ----WNPQRIIFSVDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTD 200

Query: 1075 WSKAPFTASYANFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKN 1236
            WS+APFTASY NF A ACIW             +      W +Q LDSTSQE +K VQKN
Sbjct: 201  WSQAPFTASYRNFNADACIWSSGASSCSSNTPTSTSTNTEWYSQELDSTSQERMKWVQKN 260

Query: 1237 YMIYNYCTDTKRFPQGLPRECS 1302
            YMIYNYC+DTKRFPQGLP EC+
Sbjct: 261  YMIYNYCSDTKRFPQGLPPECT 282


>emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]
          Length = 287

 Score =  407 bits (1045), Expect = e-111
 Identities = 207/319 (64%), Positives = 227/319 (71%), Gaps = 6/319 (1%)
 Frame = +1

Query: 364  VIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 543
            ++ ML+   +AS A N NQD +ITWGDGRAK+                            
Sbjct: 7    LVLMLSMXVVAS-AGNFNQDFDITWGDGRAKILNNGQLLTL------------------- 46

Query: 544  XSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNL 723
             SLDK SGSGFQSRNEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNL
Sbjct: 47   -SLDKASGSGFQSRNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNL 105

Query: 724  TGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIXXXXXXXXXXXXXXX 903
            +GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+L                     
Sbjct: 106  SGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSIL--------------------- 144

Query: 904  XWNPLSIIFFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSK 1083
             WNP  IIF VDGTPIR+FKNSESIGV +PKNQPM+IYSSLWNADDWATRGGLVKTDWS+
Sbjct: 145  -WNPQRIIFSVDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQ 203

Query: 1084 APFTASYANFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKNYMI 1245
            APFTASY NF A ACIW             +      W +Q LDSTSQE +K VQKNYMI
Sbjct: 204  APFTASYRNFNADACIWSSGASSCSSTTPSSTSTSGQWYSQELDSTSQERMKWVQKNYMI 263

Query: 1246 YNYCTDTKRFPQGLPRECS 1302
            YNYCTDTKRFPQGLP EC+
Sbjct: 264  YNYCTDTKRFPQGLPPECT 282


>ref|XP_002274827.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein
            23 [Vitis vinifera] gi|147802595|emb|CAN77531.1|
            hypothetical protein VITISV_019831 [Vitis vinifera]
          Length = 296

 Score =  407 bits (1045), Expect = e-111
 Identities = 206/333 (61%), Positives = 230/333 (69%), Gaps = 6/333 (1%)
 Frame = +1

Query: 322  MTCNTSCRAETLMFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXX 501
            MT  T+      + ++ +L  SF+ +   NL QD +ITWGDGRAK+              
Sbjct: 1    MTYPTTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDITWGDGRAKILNNGQLLTL----- 55

Query: 502  XXXXXXXXXXXXXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQG 681
                           SLDK SGSGF+S NEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQG
Sbjct: 56   ---------------SLDKASGSGFRSNNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQG 100

Query: 682  PTHDEIDFEFLGNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIX 861
            PTHDEIDFEFLGNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYSVL       
Sbjct: 101  PTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSVL------- 153

Query: 862  XXXXXXXXXXXXXXXWNPLSIIFFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADD 1041
                           WNP  IIF VDGTPIR+FKNSESIGVP+PKNQPM+IYSSLWNADD
Sbjct: 154  ---------------WNPQRIIFSVDGTPIREFKNSESIGVPYPKNQPMRIYSSLWNADD 198

Query: 1042 WATRGGLVKTDWSKAPFTASYANFKAQACIWXXXXXXXXXXXXDT------WLTQGLDST 1203
            WATRGGLVKTDWS+APFTASY NF A AC+W             +      W +Q LDST
Sbjct: 199  WATRGGLVKTDWSQAPFTASYRNFNANACVWSSGSSSCSSTSPSSTSTNGGWYSQELDST 258

Query: 1204 SQESIKSVQKNYMIYNYCTDTKRFPQGLPRECS 1302
            SQE +  VQKNYMIYNYCTDTKRFPQGLP EC+
Sbjct: 259  SQERMTWVQKNYMIYNYCTDTKRFPQGLPPECT 291


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