BLASTX nr result

ID: Coptis24_contig00001267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001267
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325548.1| predicted protein [Populus trichocarpa] gi|1...   150   2e-34
ref|NP_001235567.1| uncharacterized protein LOC100500266 [Glycin...   149   7e-34
ref|XP_002327343.1| predicted protein [Populus trichocarpa] gi|2...   149   7e-34
gb|AFK36677.1| unknown [Lotus japonicus]                              148   1e-33
ref|XP_004138643.1| PREDICTED: uncharacterized protein LOC101217...   148   1e-33

>ref|XP_002325548.1| predicted protein [Populus trichocarpa] gi|118481348|gb|ABK92617.1|
           unknown [Populus trichocarpa]
           gi|222862423|gb|EEE99929.1| predicted protein [Populus
           trichocarpa]
          Length = 96

 Score =  150 bits (380), Expect = 2e-34
 Identities = 75/96 (78%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
 Frame = -3

Query: 623 MALNSGLRSGLKLLNSVETSFSKSVSRGFHSTGVKKMGG-HGHDEPYYLHAKHMYNLDRM 447
           MALN+GLRS  KL  + E+  SKSV+RG HSTGVK+MGG HGHDEP+YLHAKHMYNLDRM
Sbjct: 1   MALNNGLRSASKLFTASESLLSKSVNRGIHSTGVKRMGGGHGHDEPFYLHAKHMYNLDRM 60

Query: 446 KHQKIVMPLAVLTAFSIGVGVPIYAVIFQQKKTSSG 339
           K+QKI MP+AV TAFSIGV VPIYAVIFQQKKT+SG
Sbjct: 61  KYQKIKMPIAVFTAFSIGVLVPIYAVIFQQKKTASG 96


>ref|NP_001235567.1| uncharacterized protein LOC100500266 [Glycine max]
           gi|255629873|gb|ACU15287.1| unknown [Glycine max]
          Length = 96

 Score =  149 bits (375), Expect = 7e-34
 Identities = 73/95 (76%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = -3

Query: 623 MALNSGLRSGLKLLNSVETSFSKSVSRGFHSTGVKKMGG-HGHDEPYYLHAKHMYNLDRM 447
           MA N+ LRS  KL+ S E+SFS SVSRGFHSTG+K+MGG HGHDEPYYLHAKHMYNLD+M
Sbjct: 1   MAFNNALRSAAKLVASSESSFSNSVSRGFHSTGMKRMGGGHGHDEPYYLHAKHMYNLDKM 60

Query: 446 KHQKIVMPLAVLTAFSIGVGVPIYAVIFQQKKTSS 342
           KHQ + M LAV TAFSIGV VP+YAVIFQQKKT+S
Sbjct: 61  KHQGLKMSLAVFTAFSIGVAVPVYAVIFQQKKTAS 95


>ref|XP_002327343.1| predicted protein [Populus trichocarpa] gi|222835713|gb|EEE74148.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  149 bits (375), Expect = 7e-34
 Identities = 75/98 (76%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
 Frame = -3

Query: 623 MALNSGLRSGLKLLNSVETSFSKSVSRGFHSTGVKKMGG---HGHDEPYYLHAKHMYNLD 453
           MALN+GLRS  KL  + E+  SKSV+R  HSTGVK+MGG   HGHDEP+YLHAKHMYNLD
Sbjct: 1   MALNNGLRSACKLFTASESLLSKSVNRCIHSTGVKRMGGGHAHGHDEPFYLHAKHMYNLD 60

Query: 452 RMKHQKIVMPLAVLTAFSIGVGVPIYAVIFQQKKTSSG 339
           RMK+QKI MPLAVLTAFSIGV VP+YAVIFQQKKT+SG
Sbjct: 61  RMKYQKIKMPLAVLTAFSIGVIVPVYAVIFQQKKTASG 98


>gb|AFK36677.1| unknown [Lotus japonicus]
          Length = 96

 Score =  148 bits (374), Expect = 1e-33
 Identities = 72/96 (75%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
 Frame = -3

Query: 623 MALNSGLRSGLKLLNSVETSFSKSVSRGFHSTGVKKMGG-HGHDEPYYLHAKHMYNLDRM 447
           MAL +GLRS  KL+ S E+S S SVSRGFHSTG+K+MGG HGHDEPYY+HAKHMYNLDRM
Sbjct: 1   MALTNGLRSAAKLIASSESSLSNSVSRGFHSTGMKRMGGGHGHDEPYYMHAKHMYNLDRM 60

Query: 446 KHQKIVMPLAVLTAFSIGVGVPIYAVIFQQKKTSSG 339
           K+Q + M LAV TAFSIGV +P+YAVIFQQKKT+SG
Sbjct: 61  KYQGLKMSLAVFTAFSIGVAIPVYAVIFQQKKTASG 96


>ref|XP_004138643.1| PREDICTED: uncharacterized protein LOC101217188 [Cucumis sativus]
          Length = 97

 Score =  148 bits (373), Expect = 1e-33
 Identities = 72/97 (74%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
 Frame = -3

Query: 623 MALNSGLRSGLKLLNSVETSFSKSVSRGFHSTGVKKMGGH--GHDEPYYLHAKHMYNLDR 450
           M+L++G++S  KLL S E    KS +RGFHSTGVK+MGGH  GHDEPYYLHAKHMYNLDR
Sbjct: 1   MSLSNGVKSCAKLLKSSEPLLEKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60

Query: 449 MKHQKIVMPLAVLTAFSIGVGVPIYAVIFQQKKTSSG 339
           MK+QK+ M L VLTAFSIGVGVPIYAV+FQQKKT+SG
Sbjct: 61  MKYQKLTMTLGVLTAFSIGVGVPIYAVVFQQKKTASG 97


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