BLASTX nr result

ID: Coptis24_contig00001259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001259
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241...   417   e-114
ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262...   399   e-109
gb|AFK39626.1| unknown [Lotus japonicus]                              387   e-105
ref|XP_003618615.1| CCP [Medicago truncatula] gi|217074134|gb|AC...   386   e-105
ref|XP_002323884.1| predicted protein [Populus trichocarpa] gi|1...   385   e-105

>ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241642 [Vitis vinifera]
          Length = 268

 Score =  417 bits (1072), Expect = e-114
 Identities = 205/269 (76%), Positives = 224/269 (83%)
 Frame = -3

Query: 834 MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 655
           MWN ASNA+SGT GLK+D  K ++A SECSDDE+S+NTSREEGLECPICWESFNIVENVP
Sbjct: 1   MWNFASNALSGTNGLKNDLLKPNQAPSECSDDEISTNTSREEGLECPICWESFNIVENVP 60

Query: 654 YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 475
           YVLWCGHTLCKNCVLGLQWAVVKFP LP+QLP FISCPWC+LLSFRLVYKGNL FPRKNF
Sbjct: 61  YVLWCGHTLCKNCVLGLQWAVVKFPTLPIQLPFFISCPWCNLLSFRLVYKGNLTFPRKNF 120

Query: 474 FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSSLRRAPRSHHPEQSGPN 295
           FLLWMVESMNGDR KSHS+ F DHQP WSSN N    +Q ++ + RR P SH PEQS  N
Sbjct: 121 FLLWMVESMNGDRGKSHSS-FCDHQPGWSSNRNLIIGNQGSHVNHRRPPYSHLPEQSESN 179

Query: 294 RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXLYAIPASAVILALYIL 115
            D  +    +LN+E ++ S+RKSLVFFVHLTAKFP         LYAIPASA ILALYIL
Sbjct: 180 HDGGHLINRFLNIERLHLSVRKSLVFFVHLTAKFPLVIIFLLIVLYAIPASAAILALYIL 239

Query: 114 ITVLFALPSFLILYFAYPSLDWLVREIIT 28
           ITVLFALPSFLILYFAYPSLDWLVREIIT
Sbjct: 240 ITVLFALPSFLILYFAYPSLDWLVREIIT 268


>ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262874 [Vitis vinifera]
          Length = 269

 Score =  399 bits (1025), Expect = e-109
 Identities = 197/270 (72%), Positives = 221/270 (81%), Gaps = 1/270 (0%)
 Frame = -3

Query: 834 MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 655
           MWN ASN I+G++GLK++S K ++  SECSDDEVSSN SREEGLECPIC+ESFNIVENVP
Sbjct: 1   MWNFASNCIAGSVGLKNNSPKPTQVASECSDDEVSSNISREEGLECPICFESFNIVENVP 60

Query: 654 YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 475
           YVLWCGHTLCKNC+LGL WAVVKFP LP+QLPLFISCPWC+LLSFRLVYKG+LKFPRKN+
Sbjct: 61  YVLWCGHTLCKNCILGLHWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGSLKFPRKNY 120

Query: 474 FLLWMVESMNGDRVKSHSTCFGD-HQPAWSSNSNTTPTSQVNYSSLRRAPRSHHPEQSGP 298
           FLLWM+ESMNGDR KSHS+  GD HQP WSS+SN    SQVN+  LRR    HH   SG 
Sbjct: 121 FLLWMLESMNGDREKSHSSFSGDHHQPVWSSDSNLALGSQVNHRILRREQFIHHSGPSGS 180

Query: 297 NRDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXLYAIPASAVILALYI 118
           N ++ +   NYL LE +++SL KSLVFFV LTAKFP         LYAIPASA ILALYI
Sbjct: 181 NHEDGHV-NNYLTLERLHSSLHKSLVFFVQLTAKFPLVVILLLIVLYAIPASAAILALYI 239

Query: 117 LITVLFALPSFLILYFAYPSLDWLVREIIT 28
           LITVLFALPS L+LYFAYPSLDWL REIIT
Sbjct: 240 LITVLFALPSVLMLYFAYPSLDWLAREIIT 269


>gb|AFK39626.1| unknown [Lotus japonicus]
          Length = 266

 Score =  387 bits (995), Expect = e-105
 Identities = 188/268 (70%), Positives = 216/268 (80%)
 Frame = -3

Query: 834 MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 655
           MWN AS+ ISG++GLK+D  K + + SECSDDE S  T+REEGLECPICWESFNIVENVP
Sbjct: 1   MWNFASSCISGSVGLKNDCLKPTHSASECSDDETSM-TTREEGLECPICWESFNIVENVP 59

Query: 654 YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 475
           Y LWCGHTLCKNC+LGLQWA+VKFP LP+QLPLFISCPWC++LSFRLV++GNLKFPRKN+
Sbjct: 60  YFLWCGHTLCKNCILGLQWAMVKFPTLPIQLPLFISCPWCNILSFRLVHQGNLKFPRKNY 119

Query: 474 FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSSLRRAPRSHHPEQSGPN 295
           FLLWM+ESMNGDR   HST  GD QP W    N+T  SQ++  + RR  + HHPE S  N
Sbjct: 120 FLLWMIESMNGDRATPHSTRCGDDQPVWPGKENSTMGSQLSLGNPRRR-QVHHPELSNSN 178

Query: 294 RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXLYAIPASAVILALYIL 115
           + N N  GN+L +E ++ SLRKSLV FVHLTAKFP         LYAIPASA ILALYI+
Sbjct: 179 QFNGN-TGNHLRMERLHTSLRKSLVLFVHLTAKFPLIIIFLLIVLYAIPASAAILALYIV 237

Query: 114 ITVLFALPSFLILYFAYPSLDWLVREII 31
           IT+LFALPSFLILYFAYPSLDWLVREII
Sbjct: 238 ITILFALPSFLILYFAYPSLDWLVREII 265


>ref|XP_003618615.1| CCP [Medicago truncatula] gi|217074134|gb|ACJ85427.1| unknown
           [Medicago truncatula] gi|355493630|gb|AES74833.1| CCP
           [Medicago truncatula] gi|388508162|gb|AFK42147.1|
           unknown [Medicago truncatula]
          Length = 266

 Score =  386 bits (992), Expect = e-105
 Identities = 187/268 (69%), Positives = 215/268 (80%)
 Frame = -3

Query: 834 MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 655
           MWN ASN I+G +GLK DSS  + + SECSDDE S    REEGLECP+CWESFNIVENVP
Sbjct: 1   MWNFASNCIAGNVGLKKDSSNPTHSASECSDDETSV-VGREEGLECPVCWESFNIVENVP 59

Query: 654 YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 475
           YVLWCGHTLCKNC+LGLQWA VKFP LPVQLPLFISCPWC+LLSFRLVY+GNL+FPRKN+
Sbjct: 60  YVLWCGHTLCKNCILGLQWATVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLRFPRKNY 119

Query: 474 FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSSLRRAPRSHHPEQSGPN 295
           FLLWMVE MNGDRVKSHSTC GD+Q   +S  N T   QVN+ +L +  + H P+ S  +
Sbjct: 120 FLLWMVEGMNGDRVKSHSTCCGDNQQQCASKGNLTLGGQVNHGNL-QGGQVHPPDTSNSS 178

Query: 294 RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXLYAIPASAVILALYIL 115
           +   N R N+L++E V+ SLRKSL+FFV LTAKFP         LYA+PASA ILALYIL
Sbjct: 179 QPRANTR-NHLDMERVHISLRKSLIFFVQLTAKFPLIIIFLLIILYAVPASAAILALYIL 237

Query: 114 ITVLFALPSFLILYFAYPSLDWLVREII 31
           +T+LFALPSFLILYF+YPSLDWLVREII
Sbjct: 238 VTILFALPSFLILYFSYPSLDWLVREII 265


>ref|XP_002323884.1| predicted protein [Populus trichocarpa] gi|118481933|gb|ABK92900.1|
           unknown [Populus trichocarpa]
           gi|222866886|gb|EEF04017.1| predicted protein [Populus
           trichocarpa]
          Length = 267

 Score =  385 bits (990), Expect = e-105
 Identities = 190/269 (70%), Positives = 215/269 (79%)
 Frame = -3

Query: 834 MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 655
           MWN AS  ++G++ L ++S K ++  SE SDDE SS  SREEGLECPICWESFNIVENVP
Sbjct: 1   MWNFASKCLAGSVSL-NNSLKPAQVPSEYSDDEASSVVSREEGLECPICWESFNIVENVP 59

Query: 654 YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 475
           YVLWCGHTLCKNC+LGLQWAVVKFP LP+QLPLFISCPWC+LLSFRLVY+GNLKFPRKN+
Sbjct: 60  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 119

Query: 474 FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSSLRRAPRSHHPEQSGPN 295
           FLLWMVES NGDR KSH T   D QP WSS+SN    +Q +  ++RR    HH E S  N
Sbjct: 120 FLLWMVESKNGDREKSHGTFCEDQQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSEAN 179

Query: 294 RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXLYAIPASAVILALYIL 115
            D+ N   +YLN+  +++SL+KSLVFFVHLTAKFP         LYAIPASA ILALYIL
Sbjct: 180 HDH-NHVNSYLNVRRIHSSLQKSLVFFVHLTAKFPLVIIFLLIILYAIPASAAILALYIL 238

Query: 114 ITVLFALPSFLILYFAYPSLDWLVREIIT 28
           ITVLFALPSFLILYFAYPSLDWLVREIIT
Sbjct: 239 ITVLFALPSFLILYFAYPSLDWLVREIIT 267


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