BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001236
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05186.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   3e-15
dbj|BAJ89869.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   3e-15
gb|EEE60147.1| hypothetical protein OsJ_13042 [Oryza sativa Japo...    86   6e-15
ref|NP_001051645.1| Os03g0807800 [Oryza sativa Japonica Group] g...    86   6e-15
ref|XP_003564096.1| PREDICTED: 40S ribosomal protein S2-4-like [...    85   1e-14

>dbj|BAK05186.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 230

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = -1

Query: 589 VKATFDCLLKTYGFLTPDFWRETKFSNSPFQEFTDLLMAKPVKALLPEEAAEKVD 425
           VKATFDCL+KTYGFLTPDFWRET F+ +P+QEFTD+L AKP KAL+ +  AEK++
Sbjct: 176 VKATFDCLMKTYGFLTPDFWRETTFTKAPYQEFTDIL-AKPTKALMLDAPAEKIE 229


>dbj|BAJ89869.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 278

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = -1

Query: 589 VKATFDCLLKTYGFLTPDFWRETKFSNSPFQEFTDLLMAKPVKALLPEEAAEKVD 425
           VKATFDCL+KTYGFLTPDFWRET F+ +P+QEFTD+L AKP KAL+ +  AEK++
Sbjct: 224 VKATFDCLMKTYGFLTPDFWRETTFTKAPYQEFTDIL-AKPTKALMLDAPAEKIE 277


>gb|EEE60147.1| hypothetical protein OsJ_13042 [Oryza sativa Japonica Group]
          Length = 284

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = -1

Query: 589 VKATFDCLLKTYGFLTPDFWRETKFSNSPFQEFTDLLMAKPVKALLPEEAAEKVD 425
           VKATFDCL+KTYGFLTPDFWR+TKF  SPFQE+TDLL AKP KAL+ +   E V+
Sbjct: 230 VKATFDCLMKTYGFLTPDFWRDTKFVKSPFQEYTDLL-AKPTKALMIDAPVENVE 283


>ref|NP_001051645.1| Os03g0807800 [Oryza sativa Japonica Group] gi|313103632|pdb|3IZ6|E
           Chain E, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|30103021|gb|AAP21434.1|
           putative 40S ribosomal protein S2 [Oryza sativa Japonica
           Group] gi|108711662|gb|ABF99457.1| 40S ribosomal protein
           S2, putative, expressed [Oryza sativa Japonica Group]
           gi|113550116|dbj|BAF13559.1| Os03g0807800 [Oryza sativa
           Japonica Group] gi|125546134|gb|EAY92273.1| hypothetical
           protein OsI_13996 [Oryza sativa Indica Group]
           gi|215694314|dbj|BAG89307.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 274

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = -1

Query: 589 VKATFDCLLKTYGFLTPDFWRETKFSNSPFQEFTDLLMAKPVKALLPEEAAEKVD 425
           VKATFDCL+KTYGFLTPDFWR+TKF  SPFQE+TDLL AKP KAL+ +   E V+
Sbjct: 220 VKATFDCLMKTYGFLTPDFWRDTKFVKSPFQEYTDLL-AKPTKALMIDAPVENVE 273


>ref|XP_003564096.1| PREDICTED: 40S ribosomal protein S2-4-like [Brachypodium
           distachyon]
          Length = 278

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/55 (69%), Positives = 47/55 (85%)
 Frame = -1

Query: 589 VKATFDCLLKTYGFLTPDFWRETKFSNSPFQEFTDLLMAKPVKALLPEEAAEKVD 425
           VKATFDCL+KTYGFLTPDFWRET F+ +P+QE+TDLL AKP KAL+ +   EK++
Sbjct: 224 VKATFDCLMKTYGFLTPDFWRETTFTKAPYQEYTDLL-AKPTKALMLDAPVEKIE 277