BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001228
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit ...   437   e-120
ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
gb|AFK36185.1| unknown [Lotus japonicus]                              423   e-116
ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit ...   423   e-116
ref|XP_002529210.1| signalosome subunit, putative [Ricinus commu...   423   e-116

>ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera]
            gi|296090054|emb|CBI39873.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  437 bits (1125), Expect = e-120
 Identities = 232/323 (71%), Positives = 244/323 (75%)
 Frame = -1

Query: 1284 ASGSAQPPAPRVFGCVIGIQKGRTVEIFNSFELLYDESTNSLDRPFLEKKQELYKKVFPN 1105
            A+ S  PP PRVFGCVIG+Q+GRTVEIFNSFELLYD ST+SLDR FLEKKQELYKKVFPN
Sbjct: 47   AAASPPPPPPRVFGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPN 106

Query: 1104 FYILGWYSTGSDAQESDMQIHKALMDINESPLYVLLNPAINHAHKDLPLTIYESELHVID 925
            FYILGWYSTGSDAQESDM IHKALMDINESP+YVLLNP+INHA KDLP+TIYESELHVID
Sbjct: 107  FYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVID 166

Query: 924  GIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATXXXXXXXXXXXXXXXXXXXX 745
            GIPQLIFVR++YTIETVEAERISVDHVAHLKPSDGGSAAT                    
Sbjct: 167  GIPQLIFVRANYTIETVEAERISVDHVAHLKPSDGGSAAT-------------------- 206

Query: 744  XXXXXXXXXAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXXXXXXXXXXXXLPA 565
                     AHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIP EN            LPA
Sbjct: 207  ------QLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPCENSLLRQVSSLLRRLPA 260

Query: 564  XXXXXXXXXXXXXXXXXXXXXXXXXXIESEKFQDDFLMEYNDTLLVTYLAMITNCSSTMN 385
                                      IES KFQDDFLMEYNDTLL++YLAM TNCSSTMN
Sbjct: 261  --------------------------IESGKFQDDFLMEYNDTLLISYLAMFTNCSSTMN 294

Query: 384  ELVDKFNTAYDRHGRRGGRSAFI 316
            ELVDKFNTAYDRH RRGGR+AFI
Sbjct: 295  ELVDKFNTAYDRHSRRGGRTAFI 317


>ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|222872088|gb|EEF09219.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  427 bits (1097), Expect = e-117
 Identities = 231/328 (70%), Positives = 245/328 (74%), Gaps = 2/328 (0%)
 Frame = -1

Query: 1293 TNGAS--GSAQPPAPRVFGCVIGIQKGRTVEIFNSFELLYDESTNSLDRPFLEKKQELYK 1120
            TNG S  GSA PP PRV+GCVIG+Q+GRTVEIFNSFELLYD  T+SLDR F+EKKQELYK
Sbjct: 32   TNGCSDGGSASPP-PRVYGCVIGVQRGRTVEIFNSFELLYDPVTHSLDRAFIEKKQELYK 90

Query: 1119 KVFPNFYILGWYSTGSDAQESDMQIHKALMDINESPLYVLLNPAINHAHKDLPLTIYESE 940
            KVFP+FYILGWYSTGSDA+ESDM IHKALMDINESP+YVLLNP+IN A KDLP+TIYESE
Sbjct: 91   KVFPHFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIYESE 150

Query: 939  LHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATXXXXXXXXXXXXXXX 760
            LHVIDGIPQLIFV SSYTIETVEAERISVDHVAHLKPSDGGSAAT               
Sbjct: 151  LHVIDGIPQLIFVCSSYTIETVEAERISVDHVAHLKPSDGGSAAT--------------- 195

Query: 759  XXXXXXXXXXXXXXAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXXXXXXXXXX 580
                          AHLTGIHSAIKMLNSRIRVLHHYL+AMQKG+IP EN          
Sbjct: 196  -----------QLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENSLLRQVSSLL 244

Query: 579  XXLPAXXXXXXXXXXXXXXXXXXXXXXXXXXIESEKFQDDFLMEYNDTLLVTYLAMITNC 400
              LPA                          IESEKFQDDFLMEYNDTLL+ YLAM TNC
Sbjct: 245  RRLPA--------------------------IESEKFQDDFLMEYNDTLLIAYLAMFTNC 278

Query: 399  SSTMNELVDKFNTAYDRHGRRGGRSAFI 316
            SSTMNELVDKFNTAYDRH RRGGR+AFI
Sbjct: 279  SSTMNELVDKFNTAYDRHSRRGGRTAFI 306


>gb|AFK36185.1| unknown [Lotus japonicus]
          Length = 317

 Score =  423 bits (1088), Expect = e-116
 Identities = 222/326 (68%), Positives = 243/326 (74%)
 Frame = -1

Query: 1293 TNGASGSAQPPAPRVFGCVIGIQKGRTVEIFNSFELLYDESTNSLDRPFLEKKQELYKKV 1114
            +NGA G      PRV+GCVIG+QKGRTVEIFNSFELLYD ST+SLDRPFLEKKQELYKKV
Sbjct: 44   SNGADGVVSSVPPRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKV 103

Query: 1113 FPNFYILGWYSTGSDAQESDMQIHKALMDINESPLYVLLNPAINHAHKDLPLTIYESELH 934
            FP+FYILGWYSTGSDA+ESDM IH+ALMDINESP+YVLLNP+INH+ KDLP++I+ESELH
Sbjct: 104  FPHFYILGWYSTGSDAEESDMNIHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELH 163

Query: 933  VIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATXXXXXXXXXXXXXXXXX 754
            VIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAAT                 
Sbjct: 164  VIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAAT----------------- 206

Query: 753  XXXXXXXXXXXXAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXXXXXXXXXXXX 574
                        AHLTGIHSAIKML+SRI+VLHHYLLAMQKGD+P EN            
Sbjct: 207  ---------QLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENSLLRQVSSLLRR 257

Query: 573  LPAXXXXXXXXXXXXXXXXXXXXXXXXXXIESEKFQDDFLMEYNDTLLVTYLAMITNCSS 394
            LPA                          IES KFQDDFLM YNDTLL++YL M+TNCSS
Sbjct: 258  LPA--------------------------IESGKFQDDFLMGYNDTLLISYLTMLTNCSS 291

Query: 393  TMNELVDKFNTAYDRHGRRGGRSAFI 316
             MNELVDKFNTAYDRH RRGGR+AF+
Sbjct: 292  AMNELVDKFNTAYDRHSRRGGRTAFM 317


>ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Glycine max]
          Length = 318

 Score =  423 bits (1088), Expect = e-116
 Identities = 222/325 (68%), Positives = 243/325 (74%)
 Frame = -1

Query: 1290 NGASGSAQPPAPRVFGCVIGIQKGRTVEIFNSFELLYDESTNSLDRPFLEKKQELYKKVF 1111
            NG  G   P +PRV+GCVIG+QKGRTVEIFNSFELLYD S++SLDR FLEKKQELYKKVF
Sbjct: 46   NGGDGVVSPLSPRVYGCVIGVQKGRTVEIFNSFELLYDPSSHSLDRTFLEKKQELYKKVF 105

Query: 1110 PNFYILGWYSTGSDAQESDMQIHKALMDINESPLYVLLNPAINHAHKDLPLTIYESELHV 931
            P+FYILGWYSTGSDA+ESDM IHKALMDINESP+YVLLNP+INH+ KDLP++I+ESELHV
Sbjct: 106  PHFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHV 165

Query: 930  IDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATXXXXXXXXXXXXXXXXXX 751
            IDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAAT                  
Sbjct: 166  IDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAAT------------------ 207

Query: 750  XXXXXXXXXXXAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXXXXXXXXXXXXL 571
                       AHLTGIHSAIKML+SRI+VLHHYLLAMQKGD+P EN            L
Sbjct: 208  --------QLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENSLLRQVSSLLRRL 259

Query: 570  PAXXXXXXXXXXXXXXXXXXXXXXXXXXIESEKFQDDFLMEYNDTLLVTYLAMITNCSST 391
            PA                          IES KFQDDFLMEYNDTLL++YLAM+TNCSS 
Sbjct: 260  PA--------------------------IESGKFQDDFLMEYNDTLLISYLAMLTNCSSA 293

Query: 390  MNELVDKFNTAYDRHGRRGGRSAFI 316
            MNELVDKFN AYDRH RRGGR+AF+
Sbjct: 294  MNELVDKFNIAYDRHSRRGGRTAFM 318


>ref|XP_002529210.1| signalosome subunit, putative [Ricinus communis]
            gi|223531328|gb|EEF33166.1| signalosome subunit, putative
            [Ricinus communis]
          Length = 318

 Score =  423 bits (1087), Expect = e-116
 Identities = 226/328 (68%), Positives = 239/328 (72%)
 Frame = -1

Query: 1299 GGTNGASGSAQPPAPRVFGCVIGIQKGRTVEIFNSFELLYDESTNSLDRPFLEKKQELYK 1120
            G   G   +     PRV+GCVIG+Q+GRTVEIFNSFELLYD  T+SLDR FLEKKQELYK
Sbjct: 43   GSDGGGENTVSLAPPRVYGCVIGVQRGRTVEIFNSFELLYDPITHSLDRAFLEKKQELYK 102

Query: 1119 KVFPNFYILGWYSTGSDAQESDMQIHKALMDINESPLYVLLNPAINHAHKDLPLTIYESE 940
            KVFP+FYILGWYSTGSDA+ESDM IHKALMDINESP+YVLLNP+IN A KDLP+ IYESE
Sbjct: 103  KVFPHFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVIIYESE 162

Query: 939  LHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATXXXXXXXXXXXXXXX 760
            LHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAAT               
Sbjct: 163  LHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAAT--------------- 207

Query: 759  XXXXXXXXXXXXXXAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXXXXXXXXXX 580
                          AHLTGIHSAIKMLNSRIRVLHHYL AMQKG+IP EN          
Sbjct: 208  -----------QLAAHLTGIHSAIKMLNSRIRVLHHYLAAMQKGEIPCENSLLRQVSSLL 256

Query: 579  XXLPAXXXXXXXXXXXXXXXXXXXXXXXXXXIESEKFQDDFLMEYNDTLLVTYLAMITNC 400
              LPA                          IESEKFQDDFLMEYNDTLL+TYLAM TNC
Sbjct: 257  RRLPA--------------------------IESEKFQDDFLMEYNDTLLITYLAMFTNC 290

Query: 399  SSTMNELVDKFNTAYDRHGRRGGRSAFI 316
            SSTMNELVDKFNTAYDRH RRGGR+AFI
Sbjct: 291  SSTMNELVDKFNTAYDRHSRRGGRTAFI 318