BLASTX nr result

ID: Coptis24_contig00001227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001227
         (908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523508.1| conserved hypothetical protein [Ricinus comm...   228   2e-57
ref|XP_002869351.1| hypothetical protein ARALYDRAFT_491646 [Arab...   220   3e-55
emb|CAA18194.1| putative protein [Arabidopsis thaliana] gi|72700...   219   5e-55
ref|NP_567864.1| uncharacterized protein [Arabidopsis thaliana] ...   219   5e-55
ref|XP_004139277.1| PREDICTED: uncharacterized protein LOC101212...   219   9e-55

>ref|XP_002523508.1| conserved hypothetical protein [Ricinus communis]
           gi|223537215|gb|EEF38847.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 172

 Score =  228 bits (580), Expect = 2e-57
 Identities = 115/165 (69%), Positives = 126/165 (76%)
 Frame = +2

Query: 104 CLVVFAITSALFVCGPALYWRFKQGLDLEIGEDVNXXXXXXXXXXXXXXXXXXNISPGLV 283
           CLV+FA+ SAL VCGPALYWRFK+     I    +                   I+PGL 
Sbjct: 12  CLVIFAVVSALGVCGPALYWRFKK----TIAFSSSKTSCPPCICDCPPPLSLLKIAPGLA 67

Query: 284 NLSVTDCGKNDPDLNKEMEKQFVDLLTEELKLQEAVAEEHTHHINITYAEARRVASQYQK 463
           NLSVTDCG NDPDL +EMEKQFVDLLTEELKLQEAVAEEH HH+NIT+AEA+RVASQYQ+
Sbjct: 68  NLSVTDCGNNDPDLKREMEKQFVDLLTEELKLQEAVAEEHIHHMNITFAEAKRVASQYQR 127

Query: 464 EAEKCNAATETCEGARERAEALLTKERKVTSAWERRARQLGWQGE 598
           EAEKCNAATETCE ARERAE LL KERKVT  WERRARQLGW+GE
Sbjct: 128 EAEKCNAATETCEEARERAEVLLIKERKVTFLWERRARQLGWEGE 172


>ref|XP_002869351.1| hypothetical protein ARALYDRAFT_491646 [Arabidopsis lyrata subsp.
           lyrata] gi|297315187|gb|EFH45610.1| hypothetical protein
           ARALYDRAFT_491646 [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  220 bits (561), Expect = 3e-55
 Identities = 107/165 (64%), Positives = 125/165 (75%)
 Frame = +2

Query: 104 CLVVFAITSALFVCGPALYWRFKQGLDLEIGEDVNXXXXXXXXXXXXXXXXXXNISPGLV 283
           CLV+FA+ SAL VCGPALYW+F +G    +G                       I+PGL 
Sbjct: 11  CLVIFAVVSALVVCGPALYWKFNKGF---VGSTRTNSLCPPCVCDCPPPLSLLQIAPGLA 67

Query: 284 NLSVTDCGKNDPDLNKEMEKQFVDLLTEELKLQEAVAEEHTHHINITYAEARRVASQYQK 463
           NLS+TDCG +DP+L +EMEKQFVDLLTEELKLQEAVA+EH+ H+N+T AEA+RVASQYQK
Sbjct: 68  NLSITDCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQK 127

Query: 464 EAEKCNAATETCEGARERAEALLTKERKVTSAWERRARQLGWQGE 598
           EAEKCNAATE CE ARERAEALL KERK+TS WE+RARQ GW+GE
Sbjct: 128 EAEKCNAATEICESARERAEALLIKERKITSLWEKRARQSGWEGE 172


>emb|CAA18194.1| putative protein [Arabidopsis thaliana] gi|7270001|emb|CAB79817.1|
            putative protein [Arabidopsis thaliana]
          Length = 2895

 Score =  219 bits (559), Expect = 5e-55
 Identities = 107/165 (64%), Positives = 125/165 (75%)
 Frame = +2

Query: 104  CLVVFAITSALFVCGPALYWRFKQGLDLEIGEDVNXXXXXXXXXXXXXXXXXXNISPGLV 283
            CLV+FA+ SAL VCGPALYW+F +G    +G                       I+PGL 
Sbjct: 2734 CLVIFAVVSALVVCGPALYWKFNKGF---VGSTRANSLCPPCVCDCPPPLSLLQIAPGLA 2790

Query: 284  NLSVTDCGKNDPDLNKEMEKQFVDLLTEELKLQEAVAEEHTHHINITYAEARRVASQYQK 463
            NLS+TDCG +DP+L +EMEKQFVDLLTEELKLQEAVA+EH+ H+N+T AEA+RVASQYQK
Sbjct: 2791 NLSITDCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQK 2850

Query: 464  EAEKCNAATETCEGARERAEALLTKERKVTSAWERRARQLGWQGE 598
            EAEKCNAATE CE ARERAEALL KERK+TS WE+RARQ GW+GE
Sbjct: 2851 EAEKCNAATEICESARERAEALLIKERKITSLWEKRARQSGWEGE 2895


>ref|NP_567864.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15028201|gb|AAK76597.1| unknown protein [Arabidopsis
           thaliana] gi|21281115|gb|AAM45060.1| unknown protein
           [Arabidopsis thaliana] gi|332660442|gb|AEE85842.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 172

 Score =  219 bits (559), Expect = 5e-55
 Identities = 107/165 (64%), Positives = 125/165 (75%)
 Frame = +2

Query: 104 CLVVFAITSALFVCGPALYWRFKQGLDLEIGEDVNXXXXXXXXXXXXXXXXXXNISPGLV 283
           CLV+FA+ SAL VCGPALYW+F +G    +G                       I+PGL 
Sbjct: 11  CLVIFAVVSALVVCGPALYWKFNKGF---VGSTRANSLCPPCVCDCPPPLSLLQIAPGLA 67

Query: 284 NLSVTDCGKNDPDLNKEMEKQFVDLLTEELKLQEAVAEEHTHHINITYAEARRVASQYQK 463
           NLS+TDCG +DP+L +EMEKQFVDLLTEELKLQEAVA+EH+ H+N+T AEA+RVASQYQK
Sbjct: 68  NLSITDCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQK 127

Query: 464 EAEKCNAATETCEGARERAEALLTKERKVTSAWERRARQLGWQGE 598
           EAEKCNAATE CE ARERAEALL KERK+TS WE+RARQ GW+GE
Sbjct: 128 EAEKCNAATEICESARERAEALLIKERKITSLWEKRARQSGWEGE 172


>ref|XP_004139277.1| PREDICTED: uncharacterized protein LOC101212944 [Cucumis sativus]
           gi|449493657|ref|XP_004159397.1| PREDICTED:
           uncharacterized protein LOC101226523 [Cucumis sativus]
          Length = 172

 Score =  219 bits (557), Expect = 9e-55
 Identities = 113/165 (68%), Positives = 125/165 (75%)
 Frame = +2

Query: 104 CLVVFAITSALFVCGPALYWRFKQGLDLEIGEDVNXXXXXXXXXXXXXXXXXXNISPGLV 283
           CLV FA+ SAL VCGPALYWRFK+ L L  G+  +                   ISPGL 
Sbjct: 12  CLVFFAVVSALAVCGPALYWRFKKALQL--GD--SKASCPPCICDCPPPLSLLKISPGLA 67

Query: 284 NLSVTDCGKNDPDLNKEMEKQFVDLLTEELKLQEAVAEEHTHHINITYAEARRVASQYQK 463
           NLSVTDCG NDPDL +EMEKQFVDLLTEELKLQEAV+ EHT H+NIT  EA+R ASQYQ+
Sbjct: 68  NLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKRAASQYQR 127

Query: 464 EAEKCNAATETCEGARERAEALLTKERKVTSAWERRARQLGWQGE 598
           EAEKC AATETCE ARERAEAL+ KERKVTS WERRARQ+GW+GE
Sbjct: 128 EAEKCIAATETCEEARERAEALMIKERKVTSLWERRARQMGWEGE 172


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