BLASTX nr result

ID: Coptis24_contig00001207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001207
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]    90   2e-16
ref|XP_002265970.1| PREDICTED: putative disease resistance prote...    89   4e-16
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...    83   3e-14
ref|XP_003619324.1| Resistance protein [Medicago truncatula] gi|...    82   3e-14
ref|XP_003619322.1| NBS resistance protein [Medicago truncatula]...    80   2e-13

>emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]
          Length = 1211

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/100 (47%), Positives = 61/100 (61%)
 Frame = -2

Query: 364  IGGWDGLKTLPEWLKSFTSLRVLQIYYFPNLLCVPDWIHCLTALRVLRISCCDALTTRCQ 185
            IG   GL TLP+W+ S TSL+ LQI   P L  +P+ I CL+ L+ LRIS C  L  RCQ
Sbjct: 1108 IGDCSGLATLPDWIGSLTSLKELQISDCPKLKSLPEEIRCLSTLQTLRISLCRHLLERCQ 1167

Query: 184  KDTGEDWHKIAHIPEVEVNDIRIQ*KKIFNVSSLDIVSII 65
             + GEDW KI+H+PE+ +N  R     + + SSL   S I
Sbjct: 1168 MEIGEDWPKISHVPEIYINGQRQIAGYMXSCSSLSFKSTI 1207


>ref|XP_002265970.1| PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
          Length = 1211

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/100 (47%), Positives = 61/100 (61%)
 Frame = -2

Query: 364  IGGWDGLKTLPEWLKSFTSLRVLQIYYFPNLLCVPDWIHCLTALRVLRISCCDALTTRCQ 185
            IG   GL TLP+W+ S TSL+ LQI   P L  +P+ I CL+ L+ LRIS C  L  RCQ
Sbjct: 1108 IGDCSGLATLPDWIGSLTSLKELQISDCPKLKSLPEEIRCLSTLQTLRISLCRHLLERCQ 1167

Query: 184  KDTGEDWHKIAHIPEVEVNDIRIQ*KKIFNVSSLDIVSII 65
             + GEDW KI+H+PE+ +N  R     + + SSL   S I
Sbjct: 1168 MEIGEDWPKISHVPEIYINGQRQIAGYMDSCSSLSFKSTI 1207


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223535270|gb|EEF36947.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1177

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/83 (45%), Positives = 56/83 (67%)
 Frame = -2

Query: 349  GLKTLPEWLKSFTSLRVLQIYYFPNLLCVPDWIHCLTALRVLRISCCDALTTRCQKDTGE 170
            GL+TLPEW+++   LR L I+  PNL  +P+ +  LT+L  L I  C  L  RC+K+ GE
Sbjct: 1048 GLQTLPEWIENLKLLRELSIWDCPNLTSLPNAMQHLTSLEFLSIWKCPNLEKRCKKEEGE 1107

Query: 169  DWHKIAHIPEVEVNDIRIQ*KKI 101
            DWHKI H+P++E+ D  I+ ++I
Sbjct: 1108 DWHKIKHVPDIEIKDQEIRMEQI 1130


>ref|XP_003619324.1| Resistance protein [Medicago truncatula] gi|355494339|gb|AES75542.1|
            Resistance protein [Medicago truncatula]
          Length = 1120

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/72 (52%), Positives = 51/72 (70%)
 Frame = -2

Query: 346  LKTLPEWLKSFTSLRVLQIYYFPNLLCVPDWIHCLTALRVLRISCCDALTTRCQKDTGED 167
            L +LP+WL + TSL+ L+I +FP L  +PD    L  L+ LRIS C  L  RC+K+TGED
Sbjct: 1006 LASLPQWLGAMTSLQTLEIKWFPMLTSLPDSFQELINLKELRISNCPMLMNRCKKETGED 1065

Query: 166  WHKIAHIPEVEV 131
            WHKIAHIP +++
Sbjct: 1066 WHKIAHIPRLKL 1077


>ref|XP_003619322.1| NBS resistance protein [Medicago truncatula]
           gi|355494337|gb|AES75540.1| NBS resistance protein
           [Medicago truncatula]
          Length = 620

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/72 (52%), Positives = 49/72 (68%)
 Frame = -2

Query: 346 LKTLPEWLKSFTSLRVLQIYYFPNLLCVPDWIHCLTALRVLRISCCDALTTRCQKDTGED 167
           L +LP WL + TSL+ L+I  FP L  +P+    L  L+ LRIS C  L  RC+K+TGED
Sbjct: 543 LASLPHWLGAMTSLQTLEIKRFPKLTSLPNSFKELINLKELRISNCPMLMNRCKKETGED 602

Query: 166 WHKIAHIPEVEV 131
           WHKIAHIP +E+
Sbjct: 603 WHKIAHIPRLEL 614


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