BLASTX nr result

ID: Coptis24_contig00001200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001200
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282642.1| PREDICTED: uncharacterized protein LOC100243...   246   3e-63
ref|XP_002531625.1| conserved hypothetical protein [Ricinus comm...   242   8e-62
ref|XP_002314860.1| predicted protein [Populus trichocarpa] gi|2...   236   3e-60
ref|XP_002312399.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_003614686.1| COSII [Medicago truncatula] gi|355516021|gb|...   231   2e-58

>ref|XP_002282642.1| PREDICTED: uncharacterized protein LOC100243921 [Vitis vinifera]
           gi|297737816|emb|CBI27017.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  246 bits (629), Expect = 3e-63
 Identities = 125/189 (66%), Positives = 142/189 (75%), Gaps = 2/189 (1%)
 Frame = -3

Query: 773 MGEGRGSTLVHLMVIILSLVAFGFAIAAERRRSTGKTVTDGSNATYCIYKSDIATGYGVG 594
           MGEG+GSTLVHL+V++LSLVAFGFA+AAERRRS G  VTD  NATYC+Y SD+ATGYGVG
Sbjct: 1   MGEGKGSTLVHLVVVVLSLVAFGFAVAAERRRSVGTIVTDDRNATYCVYNSDVATGYGVG 60

Query: 593 XXXXXXXXXXXLMGITKCMCFGRPLAPGGNRAYSIIYFISSWLTFLIAEACLVGGAAKNA 414
                      LMG+TKCMCFGRPLAPGGNRA+SIIYF+SSW+TFL+AEACL+ GA KNA
Sbjct: 61  GFLFLLTSESLLMGVTKCMCFGRPLAPGGNRAWSIIYFVSSWMTFLVAEACLIAGATKNA 120

Query: 413 YHTKYRKMVYA-DFSCESLRKXXXXXXXXXXXATMILNVYYYMYFTK-XXXXXXXXXXXX 240
           YHTKYR M+YA +FSCE+LRK           ATMILNVYYYMYF+K             
Sbjct: 121 YHTKYRGMIYAQNFSCETLRKGVFIAGAVFVVATMILNVYYYMYFSKATDTQAVRKANRA 180

Query: 239 XXTVGMTGY 213
             TVGMTGY
Sbjct: 181 SSTVGMTGY 189


>ref|XP_002531625.1| conserved hypothetical protein [Ricinus communis]
           gi|223528743|gb|EEF30753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 190

 Score =  242 bits (617), Expect = 8e-62
 Identities = 124/190 (65%), Positives = 141/190 (74%), Gaps = 2/190 (1%)
 Frame = -3

Query: 773 MGEGRGSTLVHLMVIILSLVAFGFAIAAERRRSTGKTVTDGSNATYCIYKSDIATGYGVG 594
           MGEG+GSTLVHL+V++LSLVAFGFAIAAERRRS G    D +NATYC+Y SD+ATGYGVG
Sbjct: 1   MGEGKGSTLVHLLVVVLSLVAFGFAIAAERRRSVGHIEKDLTNATYCVYNSDVATGYGVG 60

Query: 593 XXXXXXXXXXXLMGITKCMCFGRPLAPGGNRAYSIIYFISSWLTFLIAEACLVGGAAKNA 414
                      LMG+TKCMCFG PLAPGG+RA+SIIYFISSWLTFL+AEACL+ GA KNA
Sbjct: 61  SFLFLLSSESLLMGVTKCMCFGIPLAPGGDRAWSIIYFISSWLTFLVAEACLIAGATKNA 120

Query: 413 YHTKYRKMVYA-DFSCESLRKXXXXXXXXXXXATMILNVYYYMYFTK-XXXXXXXXXXXX 240
           YHTKYR M+YA +FSCESLRK           ATM+LNVYYYMYF+K             
Sbjct: 121 YHTKYRGMIYAQNFSCESLRKGVFIAGAVFVVATMVLNVYYYMYFSKATAPQTAHKAKRT 180

Query: 239 XXTVGMTGYP 210
             +VGMTGYP
Sbjct: 181 SSSVGMTGYP 190


>ref|XP_002314860.1| predicted protein [Populus trichocarpa] gi|222863900|gb|EEF01031.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  236 bits (603), Expect = 3e-60
 Identities = 118/188 (62%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
 Frame = -3

Query: 773 MGEGRGSTLVHLMVIILSLVAFGFAIAAERRRSTGKTVTDGSNATYCIYKSDIATGYGVG 594
           MGEG+GSTLVHL+V++L LVAFGFAIAAERRRSTG    D +NATYC+Y SD+ATGYGVG
Sbjct: 1   MGEGKGSTLVHLLVVVLCLVAFGFAIAAERRRSTGHIEKDATNATYCVYNSDVATGYGVG 60

Query: 593 XXXXXXXXXXXLMGITKCMCFGRPLAPGGNRAYSIIYFISSWLTFLIAEACLVGGAAKNA 414
                      LMG+T+CMCFGR LAPGG+RA+SIIYF+SSW TFL+AEACL+ GA KNA
Sbjct: 61  AFLFLLSSESLLMGVTRCMCFGRSLAPGGDRAWSIIYFVSSWATFLVAEACLIAGAQKNA 120

Query: 413 YHTKYRKMVYA-DFSCESLRKXXXXXXXXXXXATMILNVYYYMYFTKXXXXXXXXXXXXX 237
           YHTKY  M+YA +F+CE+LRK           ATMILNVYYYMYF+K             
Sbjct: 121 YHTKYVGMIYAQNFACETLRKGVFIAGAVFVVATMILNVYYYMYFSKATATKAALKTNRT 180

Query: 236 XTVGMTGY 213
            +VGMTGY
Sbjct: 181 SSVGMTGY 188


>ref|XP_002312399.1| predicted protein [Populus trichocarpa] gi|222852219|gb|EEE89766.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  234 bits (597), Expect = 2e-59
 Identities = 118/189 (62%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
 Frame = -3

Query: 773 MGEGRGSTLVHLMVIILSLVAFGFAIAAERRRSTGKTVTDGSNATYCIYKSDIATGYGVG 594
           M EG+GSTLVHL+V++LSLVAFGFAIAAERRRS G    D +NATYC+Y SD+ATGYGVG
Sbjct: 1   MEEGKGSTLVHLLVVVLSLVAFGFAIAAERRRSIGHIEKDATNATYCVYNSDVATGYGVG 60

Query: 593 XXXXXXXXXXXLMGITKCMCFGRPLAPGGNRAYSIIYFISSWLTFLIAEACLVGGAAKNA 414
                      LMGITKCMCFGR LAPGG+RA++IIYF+SSW TFL+AE CL+ GA KNA
Sbjct: 61  AFLFLLSSESLLMGITKCMCFGRSLAPGGDRAWAIIYFVSSWATFLVAEGCLIAGAKKNA 120

Query: 413 YHTKYRKMVYA-DFSCESLRKXXXXXXXXXXXATMILNVYYYMYFTKXXXXXXXXXXXXX 237
           YHTKYR M+YA +F+CE+LRK           ATMILNVYYYMYF+K             
Sbjct: 121 YHTKYRGMIYAQNFTCETLRKGVFIAGAVFVVATMILNVYYYMYFSKATASKAAHKTNRT 180

Query: 236 XTVGMTGYP 210
            +VGMTG P
Sbjct: 181 SSVGMTGNP 189


>ref|XP_003614686.1| COSII [Medicago truncatula] gi|355516021|gb|AES97644.1| COSII
           [Medicago truncatula] gi|388507888|gb|AFK42010.1|
           unknown [Medicago truncatula]
          Length = 191

 Score =  231 bits (588), Expect = 2e-58
 Identities = 119/190 (62%), Positives = 135/190 (71%), Gaps = 3/190 (1%)
 Frame = -3

Query: 773 MGEGRGSTLVHLMVIILSLVAFGFAIAAERRRSTGKT-VTDGSNATYCIYKSDIATGYGV 597
           M EGRGSTLVHL+VI+  LVAFGFA+AAERRRS G    T G+N TYC+Y SD+ATGYGV
Sbjct: 1   MAEGRGSTLVHLLVIVFCLVAFGFAVAAERRRSVGTIHKTPGTNETYCVYSSDVATGYGV 60

Query: 596 GXXXXXXXXXXXLMGITKCMCFGRPLAPGGNRAYSIIYFISSWLTFLIAEACLVGGAAKN 417
           G           LMG+TKCMCFGRPL PGGNRA+SIIYF+SSW TFL+AE+CL+ GA KN
Sbjct: 61  GAFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWATFLVAESCLIAGAKKN 120

Query: 416 AYHTKYRKMVYA-DFSCESLRKXXXXXXXXXXXATMILNVYYYMYFTK-XXXXXXXXXXX 243
           AYHTKYR ++YA +FSCESLRK            TM+LNVYYYMYFTK            
Sbjct: 121 AYHTKYRGIIYAQNFSCESLRKGIFITGAIFIVVTMVLNVYYYMYFTKATTTPLSQKTNR 180

Query: 242 XXXTVGMTGY 213
              TVGMTGY
Sbjct: 181 VSSTVGMTGY 190


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