BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001194
         (2445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis v...   285   3e-74
ref|XP_002523351.1| eukaryotic translation initiation factor 3 s...   265   6e-68
ref|XP_002320200.1| predicted protein [Populus trichocarpa] gi|2...   245   5e-62
ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]    229   3e-57
ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808...   225   4e-56

>ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1863

 Score =  285 bits (730), Expect = 3e-74
 Identities = 160/354 (45%), Positives = 213/354 (60%), Gaps = 10/354 (2%)
 Frame = -3

Query: 1822 APKDEQSDRESPSNAGLDRNSVTTVPG-EDVKEESLVSVSENIRDTPNKKLSASAVPFSP 1646
            +P +E S  E PS++  + NS + + G E++K++  V  S + R+ PNKKLSASA PF+P
Sbjct: 1507 SPNEELS--EDPSSSEPNENSHSALQGVENLKDKPSVLNSGDTRELPNKKLSASAAPFNP 1564

Query: 1645 SHATSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTV----SPICSSPLHHYPSP 1484
            S A +R   +A+NI++               NM+ H G   V    +P+CSSP H YPSP
Sbjct: 1565 SPAIARPPPVAMNITLSSGPGAVPAVSAWPLNMTLHPGPAAVLPAVNPMCSSPHHPYPSP 1624

Query: 1483 PRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHMAWSCNMSSAPLEFVPGTVWH 1304
            P  PN+MHPLPFMYPPY+Q QA+ +S FP+TS PFH NH AW CNM+    EF+PGTVW 
Sbjct: 1625 PPTPNMMHPLPFMYPPYTQPQAIPASNFPVTSSPFHPNHFAWQCNMNPNASEFMPGTVWP 1684

Query: 1303 GCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQXXXXXXXXXXXXXGSPVLN 1124
            GCHPME S++PPV E I+DPI +  VQS N EG+     L                    
Sbjct: 1685 GCHPMEFSIIPPVIEPISDPILEPKVQSGNSEGLISAPILPEEISNGGETIKEVNLLASE 1744

Query: 1123 LMDTGRPSAEISSENKQEL---DEARSPRGDISKVNCNNNLKENTERSRGKHVLGRPKKL 953
             M        + SEN +E+   D          ++  +N+  E T        +   KK+
Sbjct: 1745 AMGDANIIPVVGSENGKEIAHSDPCTVESSGKEQLGHSNSPNECTG-------ISSEKKI 1797

Query: 952  EGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKLVYNRVVRGSEDPKSTN 791
            +GE +F+IL+RG+RNRKQTLR+PISLLN+PYGSQSFK++YNRVVRGSE PKS +
Sbjct: 1798 DGEKTFSILIRGRRNRKQTLRMPISLLNRPYGSQSFKVIYNRVVRGSEVPKSNS 1851



 Score =  104 bits (259), Expect = 1e-19
 Identities = 62/137 (45%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
 Frame = -2

Query: 2372 SSPHEVDPASQSSSIVSLGKSPSYKEVALAPPGTIAKMQVRNSENGTPGTSMHAVGKFEV 2193
            S+P+++ P SQ  S+VSLGKS SYKEVALAPPGTIAKMQV   +N  P      VGK EV
Sbjct: 1353 SAPNDMSPISQKKSVVSLGKSLSYKEVALAPPGTIAKMQVTVFQNDIPDNRQLDVGKPEV 1412

Query: 2192 EVNEAKETIVSANTE-IEKKEDKTESSIPDTSFHIKDKTEVVPREEDGHPNGEIGGTPSE 2016
            E NE  E+  S  TE +    ++ + SI  +  ++KD+ EVV ++ +      IG  PSE
Sbjct: 1413 ETNEPSESTDSMITEAVNINAEENKISILHSKDYLKDEVEVVEKKNETQSGDAIGNIPSE 1472

Query: 2015 IVSLDVGMLVPENSENQ 1965
            IVS  V  +    +E Q
Sbjct: 1473 IVSKSVEAVESHGAEVQ 1489


>ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223537439|gb|EEF39067.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1872

 Score =  265 bits (676), Expect = 6e-68
 Identities = 156/359 (43%), Positives = 208/359 (57%), Gaps = 6/359 (1%)
 Frame = -3

Query: 1816 KDEQSDRESPSNAGLDRNSVTTVPG-EDVKEESLVSVSENIRDTPNKKLSASAVPFSPSH 1640
            K+   +++S        NS  T P  ED+++ SL + S   R  PNKKLSASA PF+PS 
Sbjct: 1518 KEPPFEKDSAGEFEPQCNSNPTSPEVEDLRDRSLATSSGETRGLPNKKLSASAAPFNPSP 1577

Query: 1639 ATSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTVSPICS---SPLHHYPSPPRI 1475
            + +R A +++NIS+               NM+ H G  TV P  S   SP H YPSPP  
Sbjct: 1578 SIARAAPVSMNISLPPGPGSVPAVAPWPVNMTLHPGPATVLPPVSPMPSPHHPYPSPPAT 1637

Query: 1474 PNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHMAWSCNMSSAPLEFVPGTVWHGCH 1295
            PN+M PLPF+YPPYSQ QAV +STFP+TS  FH NH +W CN++    EF+P T+W GCH
Sbjct: 1638 PNMMQPLPFIYPPYSQSQAVPTSTFPVTSNAFHPNHFSWQCNVNHRVNEFIPSTIWPGCH 1697

Query: 1294 PMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQXXXXXXXXXXXXXGSPVLNLMD 1115
             ME SVLPPVTE I D   +  VQ EN    S    L                      D
Sbjct: 1698 GMEFSVLPPVTEPIPDSALEPKVQFENPGSASPPPVLPADIVNVEEAKREVNLLAPEATD 1757

Query: 1114 TGRPSAEISSENKQELDEARSPRGDISKVNCNNNLKENTERSRGKHVLGRPKKLEGEGSF 935
                 A +  EN +E     S  G++ +++ N++    + +  G +     +K++GE +F
Sbjct: 1758 NANDLAGVRLENVKE--NGHSNLGEV-EISGNDSSHYKSFKKDGSNT--DERKIDGEKTF 1812

Query: 934  NILLRGKRNRKQTLRLPISLLNKPYGSQSFKLVYNRVVRGSEDPKSTNNVFSTSNCTSN 758
            +IL+RG+RNRKQTLR+PISLLN+PYGSQSFK++YNRVVRGSE PKST    S  +CT++
Sbjct: 1813 SILIRGRRNRKQTLRMPISLLNRPYGSQSFKVIYNRVVRGSEAPKST-CFPSAKDCTAS 1870



 Score = 80.9 bits (198), Expect = 2e-12
 Identities = 48/104 (46%), Positives = 60/104 (57%)
 Frame = -2

Query: 2354 DPASQSSSIVSLGKSPSYKEVALAPPGTIAKMQVRNSENGTPGTSMHAVGKFEVEVNEAK 2175
            D     SS+VSLGKSPSYKEVALAPPGTIAK QV   +N         VG  + E  EA 
Sbjct: 1372 DAGQVKSSVVSLGKSPSYKEVALAPPGTIAKFQVWLPQNDNSDNKDIGVGGSKEETIEA- 1430

Query: 2174 ETIVSANTEIEKKEDKTESSIPDTSFHIKDKTEVVPREEDGHPN 2043
              I +A+  +    DK  SS  D++ H+KD T+V+  +ED   N
Sbjct: 1431 --IENASEVVTVLADKDNSSATDSNDHLKDVTDVIEEKEDSQSN 1472


>ref|XP_002320200.1| predicted protein [Populus trichocarpa] gi|222860973|gb|EEE98515.1|
            predicted protein [Populus trichocarpa]
          Length = 717

 Score =  245 bits (625), Expect = 5e-62
 Identities = 155/358 (43%), Positives = 202/358 (56%), Gaps = 15/358 (4%)
 Frame = -3

Query: 1819 PKD-EQSDRESPSNAGLDRNSVTTVPG-EDVKEESLVSVSENIRDTPNKKLSASAVPFSP 1646
            PK+  + D  S  +  +D NS  T+PG ED+K++ L+  S + +  PNKKLSASA PF+P
Sbjct: 363  PKEPHEKDSSSEFDPQVDLNS--TLPGAEDLKDKPLILNSGDAQGLPNKKLSASAAPFNP 420

Query: 1645 SHATSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTV-SPI--CSSPLHHYPSP- 1484
            S +  R   +A+NI +               NM+ H G  TV  PI   SSP H YP P 
Sbjct: 421  STSIGRAPPVAINIPLPSAPGAVPAVAPWPVNMTLHPGPATVIRPINPMSSPHHPYPYPS 480

Query: 1483 -PRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHMAWSCNMSSAPLEFVPGTVW 1307
             P  PN++ PLPFMYPPYSQ  AV +STFP+TS  FH NH +W CN S    EF+P TVW
Sbjct: 481  QPPTPNMIQPLPFMYPPYSQ--AVPTSTFPVTSSAFHPNHFSWQCNASPNVSEFIPTTVW 538

Query: 1306 HGCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQXXXXXXXXXXXXXGSPVL 1127
             GC  +E SVLPPV E IADP+ +   Q EN E  S L  L                 + 
Sbjct: 539  PGCLAVEFSVLPPVVEPIADPLLEPKAQFENSESPSPLPILS-----------VDSDNIG 587

Query: 1126 NLMDTGRPSAEISSENKQELDEA------RSPRGDISKVNCNNNLKENTERSRGKHVLGR 965
               D   P A   ++N +EL  A       +   + S+     N     + S+       
Sbjct: 588  ETNDEANPQASDRNDNVKELTGAGLENIKENGHSNPSEAEIYRNDSSQEKGSQENVTSSI 647

Query: 964  PKKLEGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKLVYNRVVRGSEDPKSTN 791
             +++  E +F+ILLRGKRNRKQTLR+P+SLL++PYGSQSFK++YNRVVRGSE PKST+
Sbjct: 648  DQQINEEKTFSILLRGKRNRKQTLRMPMSLLSRPYGSQSFKVIYNRVVRGSESPKSTS 705



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
 Frame = -2

Query: 2438 KPVDKSRNESALSNP--------SSEPFQTSSPHEVDPASQSSSIVSLGKSPSYKEVALA 2283
            K V  S   S   NP        SSE    S+P+++ P+   +SIVSLGKS SYKEVALA
Sbjct: 180  KSVPSSYKTSTTENPRIGNKALTSSESAPVSAPNDIRPSK--NSIVSLGKSLSYKEVALA 237

Query: 2282 PPGTIAKMQVRNSENGTPGTSMHAVGKFEVEVNEAKETIVSANTEIEKKE-DKTESSIPD 2106
            PPGTIAK+Q    ++          GK E E NEAK    S    +E++  +K E+S  D
Sbjct: 238  PPGTIAKLQAWFPQSDNSDNQEIGDGKLE-ETNEAKAIAGSVVMGVEERSGEKDENSESD 296

Query: 2105 TSFHIKDKTEVVPREEDGHPNGEIGGTPSEIVSLDV 1998
             +  +K +   V + E+ H    +    S +VS  V
Sbjct: 297  DTDDLKKEIVGVHKMEEQHSTHVLEENSSLMVSQSV 332


>ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]
          Length = 1846

 Score =  229 bits (584), Expect = 3e-57
 Identities = 146/369 (39%), Positives = 205/369 (55%), Gaps = 20/369 (5%)
 Frame = -3

Query: 1807 QSDRESPSNAGLDRNSVTTVP----GEDVKEESLVSVSENIRD--TPNKKLSASAVPFSP 1646
            + + ++ +++G    S  T P    GED++    VS S  IR    P KKLSASA PF+P
Sbjct: 1498 KQELDTSNSSGSLEPSANTNPISQGGEDLRVN--VSPSSQIRTGGIPYKKLSASAAPFNP 1555

Query: 1645 SHATSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTV----SPICSSPLHHYPSP 1484
            S A +R A +A+N+++               NM+ H G TTV    +P+CSSP H YPSP
Sbjct: 1556 SPAIARAAPIAMNMTLPSGPRAVPAIGPWPVNMNVHPGPTTVLPAVAPMCSSPHHAYPSP 1615

Query: 1483 PRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHMAWSCNMSSAPLEFVPGTVWH 1304
            P  PN+M PLPFMYPP++Q Q+V  S FP+T+  FH+NH  +   ++    +F P  VW 
Sbjct: 1616 PTTPNMMQPLPFMYPPFTQPQSVSPSNFPVTNSAFHANHFTY---LNPTISKFGPSAVWP 1672

Query: 1303 GCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQXXXXXXXXXXXXXGSPVLN 1124
            GCHP+E  +  P+ E I DPIS++      LE  S  S L                 + N
Sbjct: 1673 GCHPVEFPLPVPIVEPIPDPISESQALCHGLESPSSASVL--------------PEDIDN 1718

Query: 1123 LMDTGRPSAEISSENKQELDEARSPRGDISKVNCNNNL--KENTERSRGKHVLGRPK--- 959
            + D+ +    +SSE  +  DEA     +  K N N N    EN    + +++        
Sbjct: 1719 IGDSNQVVKTLSSEISE--DEAVRSGSESIKENGNMNFHGSENAGNKQHQNIASNGNSSS 1776

Query: 958  ---KLEGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKLVYNRVVRGSEDPKSTNN 788
                ++GE +F+IL RG+RNRKQTLR+PISLL +P GSQSFK++YNRVVRGS  PKS  N
Sbjct: 1777 SGTNMDGEKTFSILFRGRRNRKQTLRMPISLLTRPNGSQSFKVIYNRVVRGSHAPKSM-N 1835

Query: 787  VFSTSNCTS 761
            + S+ +CT+
Sbjct: 1836 LSSSKDCTA 1844



 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
 Frame = -2

Query: 2444 SSKPVDKSRNESALSNPSSEPFQTSSPHEVDPASQSSSIVSLGKSPSYKEVALAPPGTIA 2265
            +SKP      E+     SS P     P  +D     +S VSLGKSPSYKEVALAPPGTI+
Sbjct: 1326 TSKPCANETLENGDKLLSSLP----EPDPIDANPVKNSKVSLGKSPSYKEVALAPPGTIS 1381

Query: 2264 KMQVRNSENGTPGTSMHAVGKFEVEVN-----EAKETIVSANTEIEKK-----EDKTESS 2115
            K QV N ++    +S H  GK E EV      +   T++  N  +++K      D  + S
Sbjct: 1382 KFQVYNPQSEISVSSEHDSGKHEEEVEANRNVDVDPTLIEVNDTVKEKNNDSLSDSVDDS 1441

Query: 2114 IPDTSFHI--KDKTEVVPREEDGHPNGE 2037
            + DT   I  K++TE++   +D   + E
Sbjct: 1442 LDDTGVAIEGKEETELIVAVQDNCMSAE 1469


>ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808136 [Glycine max]
          Length = 1840

 Score =  225 bits (574), Expect = 4e-56
 Identities = 142/361 (39%), Positives = 197/361 (54%), Gaps = 17/361 (4%)
 Frame = -3

Query: 1792 SPSNAGL---DRNSVTTVPGEDVKEESLVSVSENIRDTPNKKLSASAVPFSPSHATSRGA 1622
            S S+A L   D  + T+  GED+K     S   +    P KKLSASA PF+PS A +R A
Sbjct: 1498 SNSSASLEPSDNTNPTSQGGEDLKVNVSPSSQSHTGGIPYKKLSASAAPFNPSPAIARAA 1557

Query: 1621 HLALNISIXXXXXXXXXXXXV--NMSFHHGNTTV----SPICSSPLHHYPSPPRIPNVMH 1460
             +A+N+++               NM+ H G TTV    +P+CSSP H YPSPP  PN+M 
Sbjct: 1558 PIAMNMTLPSGPSAVPAIGPWPVNMNVHPGPTTVLPTVAPMCSSPHHAYPSPPATPNMMQ 1617

Query: 1459 PLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHMAWSCNMSSAPLEFVPGTVWHGCHPMESS 1280
            PLPF+YPP++Q Q+V  S +P+TS  FH+NH  +   ++    +F P  VW GCHP+E  
Sbjct: 1618 PLPFVYPPFTQPQSVAPSNYPVTSSAFHANHFTY---LNPTISKFGPSAVWPGCHPVEFP 1674

Query: 1279 VLPPVTEAIADPISDTPVQSENLEGMSILSTLQXXXXXXXXXXXXXGSPVLNLMDTGRPS 1100
            +  P+ E I DPIS++ V     E  S  S L                 + ++ D+ +  
Sbjct: 1675 LPVPIVEPIRDPISESQVLCHGSESPSSASVL--------------PEDIDSIGDSNQGV 1720

Query: 1099 AEISSENKQELDEARSPRGDISKVNCNNNL--------KENTERSRGKHVLGRPKKLEGE 944
              +SSE  +  DEA     +  K N N N         K+N               ++GE
Sbjct: 1721 KTLSSEISE--DEAVRAGSENIKENGNMNFHGSENAGNKQNQNFGSNGSSSSSETNMDGE 1778

Query: 943  GSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKLVYNRVVRGSEDPKSTNNVFSTSNCT 764
             +F+IL+RG+RNRKQTLR+PISLL +P GSQSFK++YNRVVRGS   KS  N+ S+ +CT
Sbjct: 1779 KTFSILIRGRRNRKQTLRMPISLLTRPNGSQSFKVIYNRVVRGSHATKSM-NLSSSKDCT 1837

Query: 763  S 761
            +
Sbjct: 1838 A 1838



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 51/127 (40%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
 Frame = -2

Query: 2444 SSKPVDKSRNESALSNPSSEPFQTSSPHEVDPASQSSSIVSLGKSPSYKEVALAPPGTIA 2265
            +SKP    + E+     SS P     P   D      SIVSLGKSPSYKEVALAPPGTI+
Sbjct: 1319 TSKPCVNEKLENGDKLLSSLP----EPDPTDANPVKKSIVSLGKSPSYKEVALAPPGTIS 1374

Query: 2264 KMQVRNSENGTPGTSMHAVGKFEVEVNEAKETIVSANTEIEKKE---DKTESSIPDTSFH 2094
            K QV N ++    +S H  GK E E  EA   +    T  E  +   +K + S+ D+   
Sbjct: 1375 KFQVYNPQSVISVSSEHDGGKHEEEDIEADRNVNVDPTPTEVNDMVKEKNDDSLSDSVDD 1434

Query: 2093 IKDKTEV 2073
             +D T V
Sbjct: 1435 SQDDTGV 1441